> From: Nukri Sanishvili [mailto:rsanishv...@anl.gov]

> There is a new thing (I'm pretty sure it's a bug, not a 
> feature) in 0.86:

> When I Tab for command completion, the command ends with a 
> comma when in
> fact = is expected. For example, set cartoon_fl(Tab)at_sheets, not set
> cartoon_fl(Tab)at_sheets=

Actually, that is a feature.  Slowly, the PyMOL command language is becoming 
more consistent (and more Python like).

set name,value

   is preferred over

set name=value

    Since it follows the convention that arguments to PyMOL keywords are 
separated by commas.   Nevertheless, I am a strong proponent of backwards 
compatibility.  "set parameter=value" will continue to function for years to 
come so that old scripts will not break.  

> Print quality doesn't seem to be as high as the image on the 
> display. Do I
> need to feed the PyMol output into something else first?

Increase the resolution:

ray 2000,1500

etc.
 
> Can (how) I annotate the pictures in PyMol? If it's not there 
> yet, I hope
> it'll be soon as annotation is an indivisible right for any 
> figure to have.

Sorry, your figures will continue to be oppressed with versions 0.86.  
Liberation will come in due time.

Cheers,
Warren

Reply via email to