Hi,
I was asked the following question and couldn't find the answer, can
anyone help?
When I mutate a buried small amino acid side-chain to a larger one,
it correctly reveals some clashes around that new side-chain. I
suppose the disk shaped clusters mean clashes. Can someone please
confirm
Greetings Henning,
The visible disks colors in the Mutagenesis Wizard indicate pairwise
overlap of atomic van der Waals radii. The intent is to provide a
qualitative feedback regarding contacts and bumps.
Short green lines or small green disks are shown when atoms are almost in
contact or
