[PyMOL] Problem with isomesh without map

2016-04-02 Thread Filip Leonarski
Hi, I'm struggling with making compact PSE files with Pymol state for ribosome structures with electron density maps. In general these maps are huge in 200-500 MB range. In previous versions of PyMol (1.7.x) a following trick worked: a) make isomesh b) delete map c) save pse PSE was of a

Re: [PyMOL] Problem with isomesh without map

2016-04-02 Thread Thomas Holder
Hi Filip, This is a bug, we'll fix that (probably by next week, looks like an easy fix). Cheers, Thomas On 01 Apr 2016, at 16:16, Filip Leonarski wrote: > Hi, > >I'm struggling with making compact PSE files with Pymol state for ribosome > structures

Re: [PyMOL] The Wiki appears outdated or in error

2016-04-02 Thread James Kress
Bob, Thanks for the note. The pdf files you generated were quite nice. I just cannot get the quality of output you got using the PyMOL to dae to u3d to pdf path. All I get are washed out colors. No surface properties (shine, specular, etc.) at all. PDF3DReportGen is the only