Re: [PyMOL] Selective valency on bond

2016-06-14 Thread Thomas Holder
Hi Patrick and Andreas, "valence" is actually a bond-level setting, so you don't need to create individual objects. This should work: set_bond valence, 1, organic Cheers, Thomas On 14 Jun 2016, at 10:01, Andreas Warnecke <4ndreas.warne...@gmail.com> wrote: > The easiest way to deal with

[PyMOL] Selective valency on bond

2016-06-14 Thread McIntyre, Patrick
Dear PyMol users, I have a crystal structure of my protein with an unnatural amino acid present. This amino acid has a double bond within it, which I would like to display as such. However I would like the surrounding protein side chains to not show double bond character. Is this possible at

Re: [PyMOL] Selective valency on bond

2016-06-14 Thread Andreas Warnecke
The easiest way to deal with this is setting the valence or valence_mode individually for the object. set valence, 0, object1 set valence, 1, object2 Cheers, Andreas On Mon, Jun 13, 2016 at 11:56 AM, McIntyre, Patrick wrote: > Dear PyMol users, > > I have a crystal

[PyMOL] 2nd Call For Papers - 23rd Annual Tcl/Tk Conference (Tcl'2016)

2016-06-14 Thread akupries
Hello pymol-users, fyi ... 23rd Annual Tcl/Tk Conference (Tcl'2016) http://www.tcl.tk/community/tcl2016/ November 14 - 18, 2016 Crowne Plaza Houston River Oaks 2712 Southwest Freeway, 77098 Houston, Texas, USA Important Dates: [[ Attention! Registration is open. Please have a look at