[PyMOL] carving MTZ map

2018-04-16 Thread Paul Miller
Hi I'm using Windows Pymol 2.0 and would like to show mtz (NOT ccp4!) file 2fofc density around a ligand. Can anyone tell me how to do this? I found info on a website (below), which I modified in various ways but it didn't work. Kept saying the some.2fofc file was not found. volume abc, some.2

[PyMOL] Final reminder: 11th CCP4/APS Crystallographic School in the US June 18 through 25, 2018

2018-04-16 Thread Qingping Xu
Dear Colleagues, This is a reminder for the upcoming CCP4/APS school. The deadline for registering is coming up soon, please register if you plan to attend. Thanks. Charles, Garib and Qingping original announcement Dear Colleagues, We are pleased to announce the *11th annual CCP4

Re: [PyMOL] carving MTZ map

2018-04-16 Thread Thomas Holder
Hi Paul, After loading the MTZ file, did any objects show up in the panel on the right? If PyMOL detects columns for 2fofc and/or fofc maps, and the file is named "foo.mtz", then you should get "foo.2fofc" and "foo.fofc" maps. Use one of these maps as the second argument to volume (or isomesh).