Re: [PyMOL] Movie to export

2011-11-09 Thread Troels Emtekær Linnet
What codec do I need to install?? MEncoder 1.0rc4-4.5.2 (C) 2000-2010 MPlayer Team Option x264encopts: Unknown suboption nodct_decimat success: format: 16 data: 0x0 - 0x0 MF file format detected. [mf] search expr: *.png [mf] number of files: 537 (4296) [demux_mf] file type was not set! trying

Re: [PyMOL] Movie to export

2011-11-09 Thread Marius Retegan
I used this a long time ago, but after googling for the error from bgra to yuv420p I guess that is a problem with the color space conversion that memcoder tries to enforce by default. Maybe you could try imposing the color space by adding -vf format=bgra, but I think that the video codec is not

Re: [PyMOL] Movie to export

2011-11-09 Thread Tim Schulte
Hi, Quick time player 7 pro does a great job for me. Cheers Tim Am 11/8/11 9:54 PM, schrieb Troels Emtekær Linnet: Hi. I have made a nice little movie in Pymol. 1500 frames. So now I am wondering what is the best method to export? At the moment I do export to .png with ray tracing each

Re: [PyMOL] Movie to export

2011-11-09 Thread Vitali Stanevich
have a look at this link: http://strucbio.biologie.uni-konstanz.de/ccp4wiki/index.php/Morph_with_Chimera disregard morph part. you can modify script to contain frames instead of states. i installed ffmpeg from repositories on ubuntu and don't remember any issues with kodecs. vitali On Wed, Nov

Re: [PyMOL] Movie to export

2011-11-09 Thread Vitali Stanevich
one more thing: ffmpeg script at that link didn't work for me so i had to modify it like that ffmpeg -f image2 -qscale 5 -r 24 -b 9600 -i image%d.png movie.mpg On Wed, Nov 9, 2011 at 11:22 PM, Vitali Stanevich stanev...@wisc.eduwrote: have a look at this link:

[PyMOL] Movie to export

2011-11-08 Thread Troels Emtekær Linnet
Hi. I have made a nice little movie in Pymol. 1500 frames. So now I am wondering what is the best method to export? At the moment I do export to .png with ray tracing each image. set ray_trace_frames = 1 That takes a long time. And what program should I use to pack them together? The easy wasy?

Re: [PyMOL] Movie to export

2011-11-08 Thread Jason Vertrees
Hi Troels, One benefit of the Incentive version of PyMOL is the Files Save Movie as ... MPEG feature. If you don't have that or you want to use a different compressor that's cool. In the past I had great luck with mencoder (http://www.pymolwiki.org/index.php/Making_Movies)-- but I think