Re: [PyMOL] Pymol not opening files

2024-02-26 Thread Petro 
Thanks.
I will try that.

On Sun, 25 Feb 2024, 07:08 Jared Sampson, 
wrote:

> Hi Shivani -
>
> PyMOL's defer_builds_mode
>  setting can improve
> performance when loading large trajectories.
>
> You can type `set defer_builds_mode, 3` on the PyMOL command line or
> adjust it via the Settings > Edit All menu.
>
> Hope that helps.
>
> Cheers,
> Jared
>
>
>
> On Fri, Feb 23, 2024 at 4:15 PM shivani godbole 
> wrote:
>
>> Hello,
>>
>> This is Shivani Godbole. I use Pymol for the movie files generated using
>> MD simulations. I am trying to use Pymol to visualize one of the movie
>> files which is around 2 GB in size, but Pymol keeps crashing every time I
>> open it. I was hoping you could assist me with the same. My computer
>> uses 11th Gen Intel(R) Core(TM) i5-1135G7 @ 2.40GHz   2.42 GHz processor
>> and has 8 GB RAM and a 64-bit OS.
>>
>> Thank you!
>> ___
>> PyMOL-users mailing list
>> Archives: http://www.mail-archive.com/[email protected]
>> Unsubscribe:
>> https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe
>
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Re: [PyMOL] Pymol not opening files

2024-02-24 Thread Jared Sampson 
Hi Shivani -

PyMOL's defer_builds_mode
 setting can improve
performance when loading large trajectories.

You can type `set defer_builds_mode, 3` on the PyMOL command line or adjust
it via the Settings > Edit All menu.

Hope that helps.

Cheers,
Jared



On Fri, Feb 23, 2024 at 4:15 PM shivani godbole  wrote:

> Hello,
>
> This is Shivani Godbole. I use Pymol for the movie files generated using
> MD simulations. I am trying to use Pymol to visualize one of the movie
> files which is around 2 GB in size, but Pymol keeps crashing every time I
> open it. I was hoping you could assist me with the same. My computer
> uses 11th Gen Intel(R) Core(TM) i5-1135G7 @ 2.40GHz   2.42 GHz processor
> and has 8 GB RAM and a 64-bit OS.
>
> Thank you!
> ___
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> https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe
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Re: [PyMOL] Pymol not opening files

2024-02-24 Thread Petro 
I would not use pymol for big trajectory analysis.



On Fri, 23 Feb 2024 at 22:13, shivani godbole  wrote:

> Hello,
>
> This is Shivani Godbole. I use Pymol for the movie files generated using
> MD simulations. I am trying to use Pymol to visualize one of the movie
> files which is around 2 GB in size, but Pymol keeps crashing every time I
> open it. I was hoping you could assist me with the same. My computer
> uses 11th Gen Intel(R) Core(TM) i5-1135G7 @ 2.40GHz   2.42 GHz processor
> and has 8 GB RAM and a 64-bit OS.
>
> Thank you!
> ___
> PyMOL-users mailing list
> Archives: http://www.mail-archive.com/[email protected]
> Unsubscribe:
> https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe
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Re: [PyMOL] Pymol not opening files

2024-02-23 Thread Roy, Kushal Raj 
Hi Shivani,

To avoid PyMOL crashes when handling large movie files, try reducing the file 
size, increasing virtual memory, minimizing memory usage by adjusting PyMOL 
settings, loading only specific frames, upgrading RAM or CPU, preprocessing the 
movie file with external tools, and closing other memory-intensive apps.



Regards,

[University of Houston logo]Kushal Raj Roy (he/him)
MS | BS
Research Assistant
Department of Biology & Biochemistry
University of Houston
[email protected]<mailto:[email protected]>
https://uh.edu<https://uh.edu/>

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From: shivani godbole 
Sent: Friday, February 23, 2024 3:12:31 PM
To: [email protected] 
Subject: [PyMOL] Pymol not opening files


Hello,

This is Shivani Godbole. I use Pymol for the movie files generated using MD 
simulations. I am trying to use Pymol to visualize one of the movie files which 
is around 2 GB in size, but Pymol keeps crashing every time I open it. I was 
hoping you could assist me with the same. My computer uses 11th Gen Intel(R) 
Core(TM) i5-1135G7 @ 2.40GHz   2.42 GHz processor and has 8 GB RAM and a 64-bit 
OS.

Thank you!
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[PyMOL] Pymol not opening files

2024-02-23 Thread shivani godbole 
Hello,

This is Shivani Godbole. I use Pymol for the movie files generated using MD
simulations. I am trying to use Pymol to visualize one of the movie files
which is around 2 GB in size, but Pymol keeps crashing every time I open
it. I was hoping you could assist me with the same. My computer uses 11th
Gen Intel(R) Core(TM) i5-1135G7 @ 2.40GHz   2.42 GHz processor and has 8 GB
RAM and a 64-bit OS.

Thank you!
___
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