Re: [PyMOL] Re: fitting residues

2002-07-26 Thread Gareth Stockwell
Jason, I think the solution is to create a copy of the object, then render one copy as cartoon, and the other as sticks. The colouring will then be independent. By the way, does anyone kwow if it is possible to invoke the command window after startup? I normally launch PyMOL with -x, but

[PyMOL] Re: fitting residues

2002-07-25 Thread Jason Maynes
Hello: I am trying to color residues off a cartoon loop and want to color the sticks version of the residue down to the Ca, but not the Ca itself (ie. the residue and the cartoon are different colors). The problem is that if I color the Ca, then that section of the cartoon also gets colored. If