Re: [PyMOL] Problem with pymol installation

2016-03-21 Thread Christoph Gohlke 
Make sure you are using the 64-bit version of Python 2.7: 
python-2.7.11.amd64.msi.

If that does not help, please list the contents of %CD%: dir "%CD%"\*.whl

Christoph



On 3/21/2016 3:31 AM, Bondurant wrote:
> Hi everybody,
> I recently restored my laptop to factory settings and I am trying now to
> install latest precompiled pymol version  following the instructions
> from http://www.pymolwiki.org/index.php/Windows_Install.
> I have installed python 2.7.11 and put in a Pymol_installation folder
> pip 8.0.3, numpy 1.10.4+mkl, pmw 2.0.1, pymol 1.8.1.0 and pymol_launcher
> 1.0 whl files, all of them downloaded from the  Christoph Gohlke
> webpage. However, after typing in the command prompt
>
> C:\Python27\python.exe  pip-8.0.3-py2.py3-none-any.whl/pip  install  
> --no-index  --find-links="%CD%"  pymol_launcher
>
> I get the following error:
>
>   "Could not find  a version that satifisfies the requirement
> pymol-launcher (from versions: )
> No matching distribution found for pymol launcher"
>
>
> Could you provide me any help? Am i doing anything wrong? Have i skipped
> any step in the installation process?
>
> Thanks
>
> Sergio
>
>
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[PyMOL] Problem with pymol installation

2016-03-21 Thread Bondurant 
Hi everybody,
I recently restored my laptop to factory settings and I am trying now to
install latest precompiled pymol version  following the instructions from
http://www.pymolwiki.org/index.php/Windows_Install.
I have installed python 2.7.11 and put in a Pymol_installation folder pip
8.0.3, numpy 1.10.4+mkl, pmw 2.0.1, pymol 1.8.1.0 and pymol_launcher 1.0
whl files, all of them downloaded from the  Christoph Gohlke webpage.
However, after typing in the command prompt

C:\Python27\python.exe pip-8.0.3-py2.py3-none-any.whl/pip install
--no-index --find-links="%CD%" pymol_launcher

I get the following error:

 "Could not find  a version that satifisfies the requirement pymol-launcher
(from versions: )
No matching distribution found for pymol launcher"


Could you provide me any help? Am i doing anything wrong? Have i skipped
any step in the installation process?

Thanks

Sergio
--
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Accelerate data analysis in your applications with
Intel Data Analytics Acceleration Library.
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[PyMOL] problem with pymol installation

2010-10-08 Thread Gincel 
Dear all

I try to run Pymol on windows vista
I installed the 1.1 version, but when I launch pymol, I get a big error 
message
I have no plugin installed (I first installed pymol and tried to install 
some plugin, but I got error messages, so I uninstalled everything and 
tried to reinstall pymol from scratch)
abd now, I get this :

/Exception in plugin 'stride_ss' -- Traceback follows...
Traceback (most recent call last):
  File C:\Program Files\DeLano 
Scientific\PyMOL/modules\pmg_tk\PMGApp.py, line 222, in initializePlugins
__builtin__.__import__(mod_name)
  File C:\Program Files\DeLano 
Scientific\PyMOL/modules\pmg_tk\startup\stride_ss.py, line 125, in ?
cmd.extend(stride2pymol,stride2pymol)
NameError: name 'cmd' is not defined
Error: unable to initialize plugin 'stride_ss'.
C:\Program Files\DeLano Scientific\PyMOL/modules\pmg_tk\PMGApp.py:222: 
DeprecationWarning: Non-ASCII character '\xfe' in file C:\Program 
Files\DeLano Scientific\PyMOL/modules\pmg_tk\startup\rendering.py on 
line 2, but no encoding declared; see 
http://www.python.org/peps/pep-0263.html for details
  __builtin__.__import__(mod_name)
Exception in plugin 'rendering' -- Traceback follows...
Traceback (most recent call last):
  File C:\Program Files\DeLano 
Scientific\PyMOL/modules\pmg_tk\PMGApp.py, line 222, in initializePlugins
__builtin__.__import__(mod_name)
  File C:\Program Files\DeLano 
Scientific\PyMOL/modules\pmg_tk\startup\rendering.py, line 1
 PKF(aSiW-RV3;jzf#n[TTv
   ^
 SyntaxError: invalid syntax
Error: unable to initialize plugin 'rendering'.
Exception in plugin 'fitting' -- Traceback follows...
Traceback (most recent call last):
  File C:\Program Files\DeLano 
Scientific\PyMOL/modules\pmg_tk\PMGApp.py, line 227, in initializePlugins
mod.__init__(self)
TypeError: module.__init__() argument 1 must be string, not instance
Error: unable to initialize plugin 'fitting'.
Exception in plugin 'list_contacts' -- Traceback follows...
Traceback (most recent call last):
  File C:\Program Files\DeLano 
Scientific\PyMOL/modules\pmg_tk\PMGApp.py, line 227, in initializePlugins
mod.__init__(self)
TypeError: module.__init__() argument 1 must be string, not instance
Error: unable to initialize plugin 'list_contacts'.


/Could someone help me ?



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email : edith.gin...@parisdescartes.fr
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[PyMOL] Problem with pymol installation in ubuntu 8.10

2009-02-12 Thread Abhik Mukhopadhyay 
Dear All
I am trying to install pymol as described in the pymol wiki. I am experiencing
some problems. I am using Ubuntu 8.10 64 bits version in an AMD machine. The
last part of the output after the sudo python setup.py install was 

layer0/os_gl.h:69: error: expected ‘)’ before ‘width’
layer0/os_gl.h:121:20: error: GL/glut.h: No such file or directory
In file included from layer5/main.h:35,
 from layer0/Block.c:20:
layer0/os_python.h:28:19: error: Python.h: No such file or directory
In file included from layer0/Block.c:20:
layer5/main.h:45: error: expected ‘)’ before ‘*’ token
layer5/main.h:46: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before
‘*’ token
layer0/Block.c: In function ‘BlockFill’:
layer0/Block.c:43: warning: implicit declaration of function ‘glBegin’
layer0/Block.c:43: error: ‘GL_POLYGON’ undeclared (first use in this function)
layer0/Block.c:43: error: (Each undeclared identifier is reported only once
layer0/Block.c:43: error: for each function it appears in.)
layer0/Block.c:44: warning: implicit declaration of function ‘glVertex2i’
layer0/Block.c:48: warning: implicit declaration of function ‘glEnd’
layer0/Block.c: In function ‘BlockOutline’:
layer0/Block.c:56: error: ‘GL_LINE_LOOP’ undeclared (first use in this function)
error: command 'gcc' failed with exit status 1

Then I checked this 

caspio:~/pymol_temp/pymol gcc -v
Using built-in specs.
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.2-1ubuntu12'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-checking=release
--build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
gcc version 4.3.2 (Ubuntu 4.3.2-1ubuntu12) 

If anyone has any idea to solve this.
Thanks in advance.
Abhik
-- 
Dr. Abhik Mukhopadhyay 
Post Doctoral Associate
Universidade Nova de Lisboa, 
FCT, Caparica,

[PyMOL] problem with pymol installation

2007-07-05 Thread Mayzel Max 

Hi Pymol-users,
I'm trying to install pymol from svn repository. After 
compiling ( python setup.py build, python setup.py install, 
python setup2.py install) when I'm running pymol I have 
such an error


 OpenGL graphics engine:
  GL_VENDOR: NVIDIA Corporation
  GL_RENDERER: GeForce4 MX 440 with AGP8X/AGP/SSE/3DNOW!
  GL_VERSION: 1.5.8 NVIDIA 96.39
Traceback (most recent call last):
  File 
/usr/lib/python2.4/site-packages/pymol/__init__.py, line 
254, in exec_deferred

cmd.config_mouse(quiet=1)
  File 
/usr/lib/python2.4/site-packages/pymol/__init__.py, line 
278, in adapt_to_hardware

cmd.set('ribbon_smooth',0,quiet=1)
  File 
/usr/lib/python2.4/site-packages/pymol/__init__.py, line 
364, in launch_gui

__import__(self.invocation.options.gui)
  File 
/usr/lib/python2.4/site-packages/pmg_tk/__init__.py, line 
22, in ?

from PMGApp import *
  File /usr/lib/python2.4/site-packages/pmg_tk/PMGApp.py, 
line 32, in ?

class PMGApp(Pmw.MegaWidget):
AttributeError: 'module' object has no attribute 'MegaWidget'
 PyMOL: abrupt program termination.

I suppose this is due to errors in python Pmw installation?
Any ideas?
Many thanks in advance,
Max
--
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