Re: [PyMOL] Problems setting bg_rgb_top / bg_rgb_bottom

2014-10-08 Thread Tsjerk Wassenaar
Hi James,

Can you try:

cmd.set(bg_rgb_bottom,cmd.get_color_tuple(bottom))

The number refers to a color index, so that should probably work.

Hope it helps,

Tsjerk

On Wed, Oct 8, 2014 at 9:27 AM, James Davidson j.david...@vernalis.com
wrote:

  Dear All,



 I wonder if anyone can help with this issue?  I am currently using pymol
 1.7.0.2 (based on SVN rev. 4087).  Enabling gradient backgrounds works fine
 (as in previous versions) – however, when I try to change the gradient
 colours by setting bg_rgb_top / bg_rgb_bottom I see errors.



 For example:



 PyMOLtop = cmd.get(bg_rgb_top)

 PyMOLbottom = cmd.get(bg_rgb_bottom)

 PyMOLprint top, bottom

 0x4d 0x80

 PyMOLcmd.set(bg_rgb_top, bottom)

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 PyMOLcmd.set(bg_rgb_bottom, top)

 Setting-Error: type read mismatch (color) 664

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 664

 Setting-Error: type read mismatch (color) 664

 Setting-Error: type read mismatch (color) 664

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 664

 Setting-Error: type read mismatch (color) 664

 Setting-Error: type read mismatch (color) 664

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663

 Setting-Error: type read mismatch (color) 663



 If I then look in the settings using the GUI (‘edit all’), and filter-down
 using ‘bg_rgb’, I see that (for the values I have tried to modify) the
 original hex values are now represented as (presumably string
 representations) of lists of floats (ie like the settings used to be prior
 to version 1.6?!):



 bg_rgb  0x00

 bg_rgb_bottom[ 0.00784, 0.0, 0.0 ]

 bg_rgb_top[ 0.01098, 0.01098, 0.0 ]





 If I try to modify via the GUI, by entering a string hex-value, the change
 reverts to the list-type when I press the return key…

 This looks related to an existing thread (
 http://sourceforge.net/p/pymol/mailman/message/31473011/), where the
 final post suggests those issues were resolved in rev. 4043.



 Any help/advice would be greatly appreciated!



 Kind regards



 James



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Re: [PyMOL] Problems setting bg_rgb_top / bg_rgb_bottom

2014-10-08 Thread Thomas Holder
Hi James,

this was fixed in SVN rev 4094. So you may try the latest code from SVN, or 
apply the fix to your 1.7.0.2 code base. It's the first junk in this patch:

http://sourceforge.net/p/pymol/code/4094/tree//trunk/pymol/layer1/Setting.cpp?diff=50c0fc56e88f3d0bdf694277:4093

Cheers,
  Thomas

On 08 Oct 2014, at 03:27, James Davidson j.david...@vernalis.com wrote:

 Dear All,
  
 I wonder if anyone can help with this issue?  I am currently using pymol 
 1.7.0.2 (based on SVN rev. 4087).  Enabling gradient backgrounds works fine 
 (as in previous versions) – however, when I try to change the gradient 
 colours by setting bg_rgb_top / bg_rgb_bottom I see errors.
  
 For example:
  
 PyMOLtop = cmd.get(bg_rgb_top)
 PyMOLbottom = cmd.get(bg_rgb_bottom)
 PyMOLprint top, bottom
 0x4d 0x80
 PyMOLcmd.set(bg_rgb_top, bottom)
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 PyMOLcmd.set(bg_rgb_bottom, top)
 Setting-Error: type read mismatch (color) 664
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 664
 Setting-Error: type read mismatch (color) 664
 Setting-Error: type read mismatch (color) 664
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 664
 Setting-Error: type read mismatch (color) 664
 Setting-Error: type read mismatch (color) 664
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
 Setting-Error: type read mismatch (color) 663
  
 If I then look in the settings using the GUI (‘edit all’), and filter-down 
 using ‘bg_rgb’, I see that (for the values I have tried to modify) the 
 original hex values are now represented as (presumably string 
 representations) of lists of floats (ie like the settings used to be prior to 
 version 1.6?!):
  
 bg_rgb  0x00
 bg_rgb_bottom[ 0.00784, 0.0, 0.0 ]
 bg_rgb_top[ 0.01098, 0.01098, 0.0 ]
  
  
 If I try to modify via the GUI, by entering a string hex-value, the change 
 reverts to the list-type when I press the return key…
 This looks related to an existing thread 
 (http://sourceforge.net/p/pymol/mailman/message/31473011/), where the final 
 post suggests those issues were resolved in rev. 4043.
  
 Any help/advice would be greatly appreciated!
  
 Kind regards
  
 James

-- 
Thomas Holder
PyMOL Developer
Schrödinger, Inc.
--
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