Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white

2013-09-08 Thread Thomas Holder
Hi Engin, the sequence viewer background and font colors are fixed in the latest open-source code (SVN rev 4041) and will be fixed in the next PyMOL release. Cheers, Thomas Engin Özkan wrote, On 09/04/13 19:59: Hi everybody, Using MacPyMOL 1.6.0.0 Incentive Build, I no longer can see

Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white

2013-09-05 Thread Christoph Parthier
Hi, I experience the same with WinPyMOL 1.6.0.0 Incentive Build (running under Windows 7, NVidia Quadro 4000) - but not under Linux PyMOL 1.6.0.0. In addition I have the following related problem in WinPyMOL 1.6.0.0: when setting the background color (of the graphics window) to white, the

Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white

2013-09-04 Thread Engin Özkan
Thanks, Vaheh. As I did say that in my first post, actually purple, brown, forest etc. work too. But none of the primary colors (RGB or CMYK) does. And a number of them (like pink) give wrong colors. And thanks for confirming the issue. Engin On 9/4/13 4:03 PM, Oganesyan, Vaheh wrote: Engin,

Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white

2013-09-04 Thread Oganesyan, Vaheh
Engin, If you go to Edit_all and change the seq_view_label_color to grey the numbers will become visible with white bkgr. Vaheh -Original Message- From: Engin Özkan [mailto:eoz...@stanford.edu] Sent: Wednesday, September 04, 2013 4:40 PM To: pymol-users@lists.sourceforge.net

Re: [PyMOL] Sequence numbers in MacPyMOL 1.6.0.0 with background set to white

2013-09-04 Thread Engin Özkan
I forgot to explicitly say, this is only for the Sequence View panel, which has a black background regardless of the background parameter. And it applies to both sequence numbers and chain labels. Sequences themselves are displayed correctly. Engin On 9/4/13 12:59 PM, Engin Özkan wrote: Hi