Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-26 Thread Jason Moore
I just tried installing python-tables on a clean install of 12.10 on a different machine and all went fine. So I've got something corrupted on my machine...just a localized bug. Jason On Fri, Oct 26, 2012 at 2:40 PM, Jason Moore wrote: > I've posted a bug report here: > https://bugs.launchpad.n

Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-26 Thread Jason Moore
I've posted a bug report here: https://bugs.launchpad.net/ubuntu/+source/pytables/+bug/1071918 Maybe others could see if it is reproducible in Ubuntu 12.10. Thanks, Jason On Fri, Oct 26, 2012 at 2:09 PM, Jason Moore wrote: > The simlink is a workaround for Ubuntu 12.10. It is certainly not th

Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-26 Thread Jason Moore
The simlink is a workaround for Ubuntu 12.10. It is certainly not the long term solution, but I don't see why it is a bad idea. python-tables in the Ubuntu 12.10 repos cannot find the HDF5 library because it is looking for libhdf5.so.6 on the path but there is only libhdf5.so.7 (which is a simlink

Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-26 Thread Antonio Valentino
Hi Jason, Il 26/10/2012 21:59, Jason Moore ha scritto: > Solution was simple once I found it. Here is the workaround: > > https://bugs.launchpad.net/ubuntu/+source/octave/+bug/1005243 > > Just make a symlink to the new file. > > Jason Honestly I don't think it is a good idea. ciao -- Antonio

Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-26 Thread Antonio Valentino
Hi Jason, Il 26/10/2012 21:37, Jason Moore ha scritto: > I'll post the bug report, but I'd like to get this working on my system. > I've always had trouble compiling pytables from source due to the > dependencies. Right now I just need to get this working because I can no > longer use my software

Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-26 Thread Jason Moore
Solution was simple once I found it. Here is the workaround: https://bugs.launchpad.net/ubuntu/+source/octave/+bug/1005243 Just make a symlink to the new file. Jason On Fri, Oct 26, 2012 at 12:37 PM, Jason Moore wrote: > I'll post the bug report, but I'd like to get this working on my system.

Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-26 Thread Jason Moore
I'll post the bug report, but I'd like to get this working on my system. I've always had trouble compiling pytables from source due to the dependencies. Right now I just need to get this working because I can no longer use my software now that PyTabes is broken. Question 1: What are the exact com

Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-26 Thread Antonio Valentino
Hi Jason, Il 26/10/2012 18:44, Jason Moore ha scritto: > Where exactly do I submit the bug report? There doesn't seem to be a bug > option here: https://launchpad.net/ubuntu/quantal/+package/python-tables > > Jason of course you need a launchpad account, than you can follow instruction of the Re

Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-26 Thread Jason Moore
Where exactly do I submit the bug report? There doesn't seem to be a bug option here: https://launchpad.net/ubuntu/quantal/+package/python-tables Jason On Thu, Oct 25, 2012 at 11:27 PM, Antonio Valentino < antonio.valent...@tiscali.it> wrote: > Hi Jason, > > Il giorno 26/ott/2012, alle ore 07:28

Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-25 Thread Antonio Valentino
Hi Jason, Il giorno 26/ott/2012, alle ore 07:28, Jason Moore ha scritto: > So it looks like python-tables in Ubuntu 12.10 requires libhdf5-7 and > libhdf5-7 has /usr/lib/libhdf5.so.7 not libhdf5.so.6. Correct, the hdf5 package has been updated in ubuntu 12.10. If you use the standard python-t

Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-25 Thread Jason Moore
So it looks like python-tables in Ubuntu 12.10 requires libhdf5-7 and libhdf5-7 has /usr/lib/libhdf5.so.7 not libhdf5.so.6. Jason On Thu, Oct 25, 2012 at 4:10 PM, Aquil Abdullah wrote: > Can you check to see if libhdf5.so is in your p

Re: [Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-25 Thread Aquil Abdullah
Can you check to see if libhdf5.so is in your path? If not, you can add it to the path where it resides to your PATH variable. Hopefully, that helps. Aquil H. Abdullah On Oct 25, 2012, at 18:42, Jason Moore wrote: I just updated to Ubuntu 12.10 and my pytables install is broken. I reinstalled

[Pytables-users] PyTables broke in Ubuntu 12.10

2012-10-25 Thread Jason Moore
I just updated to Ubuntu 12.10 and my pytables install is broken. I reinstalled and it seems like I have hdf5 1.8.4 installed but I get this error: moorepants@moorepants-LT:BicycleDataProcessor(master)$ vitables InstrumentedBicycleData.h5 Traceback (most recent call last): File "/usr/bin/vitable