The National Institutes of Health is now accepting applications for
tenure-track positions through the Earl Stadtman recruitment mechanism.
Details are available here:
http://goo.gl/vF95Pi
Sean
[[alternative HTML version deleted]]
___
The National Institutes of Health is now accepting applications for
tenure-track positions through the Earl Stadtman recruitment mechanism.
Details are available here:
http://goo.gl/vF95Pi
Sean
[[alternative HTML version deleted]]
___
Hi Thomas,
- Original Message -
From: Thomas J Hardcastle tj...@cam.ac.uk
To: bioc-devel@r-project.org
Sent: Monday, September 8, 2014 5:19:09 PM
Subject: [Bioc-devel] Changing the name of a package
I have a package on the development build called riboSeq; my
biological
I just wanted to add my support to Josef request.
During the last few weeks I received several emails from users asking
me if I plan to make a version of RUVSeq compatible with R 3.1. (My
RUVSeq package is in devel).
I understand the error comes directly from install.packages, but is
there a way
Thanks Martin,
yes, you're right about the use the devel version, but perhaps
biocLite could check if the package is available in the devel, just to
distinguish between a package that is not in Bioconductor (mistyping?)
and one that is not yet available in release.
Just my two cents.
Davide
On
On 09/08/2014 06:15 AM, Gabe Becker wrote:
Michael,
Tags could work. Another approach would be to update the repository and
then look in the log to see if the version number was changed in the most
recent commit. In a sense this is the converse of what our GRANBase package
does when locating
Hi Martin,
I wonder where the users are getting the notion that they _should_ be able
to install RUVSeq in Bioc 2.14? I guess they follow the link in the Nature
Methods paper to the devel landing page, then follow the 'Installation'
instructions without paying attention to the various
I use a package to contain simple functions that can be handled by unit tests
for correctness and more complex functions that combine the simple functions
with business logic. Where there are proposals to change either the simple
functions or the business logic, a sample needs to be run before
Dear Stephanie,
Have a look at the testthat package and the related article in the R Journal.
Best regards,
ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and
Forest
team Biometrie Kwaliteitszorg / team Biometrics Quality Assurance
Kliniekstraat
I have unit tests using testthat but these are typically of these types:
1) Check for correct calculation for a single set of valid inputs
2) Check for correct calculation for a larger set of valid inputs
3) Check for errors when providing incorrect inputs
4) Check for known frailties / past
If you don't intend to keep the old business logic in the long run,
perhaps a version control system such as Git can help you. If you use it
in single-user mode, you can think of it as a backup system where you
manually create each snapshot and give it a name, but it actually can do
much more.
There is a small problem in the CRAN submission form, which is not super
urgent but probably good to be aware of.
So I noticed that after I submitted a package, the submission was confirmed
without me actually clicking the link in the confirmation email (which
could be a potential security risk).
On 09/10/2014 06:12 AM, Kirill Müller wrote:
If you don't intend to keep the old business logic in the long run,
perhaps a version control system such as Git can help you. If you use it
in single-user mode, you can think of it as a backup system where you
manually create each snapshot and give
Early on I had been wondering if deprecating I() and the AsIs class would
be a way to get the problem to go away. I imagine (based on no data at
all!) that they are rarely used. If I were writing the same code today, I
would use options(stringsAsFactors=FALSE) instead of sprinkling I() here
and
In the context of installing a Bioconductor package using our biocLite()
function, install.packages() warns
install.packages(RUVSeq, repos=http://bioconductor.org/packages/2.14/bioc;)
Installing package into
'/home/mtmorgan/R/x86_64-unknown-linux-gnu-library/3.1-2.14'
(as 'lib' is
15 matches
Mail list logo
