Re: [Rd] R (development) changes in arith, logic, relop with (0-extent) arrays

2016-09-12 Thread Hervé Pagès
Hi, On 09/12/2016 08:21 AM, Martin Maechler wrote: Radford Neal on Fri, 9 Sep 2016 10:29:14 -0400 writes: >> Radford Nea: >> > So it may make more sense to move towards consistency in the >> > permissive direction, rather than the restrictive

Re: [Rd] R (development) changes in arith, logic, relop with (0-extent) arrays

2016-09-12 Thread Gabriel Becker
On Mon, Sep 12, 2016 at 9:51 AM, Radford Neal wrote: > > > But isn't the intent to make it an error later? So I assume we're > > > debating making it an error, not just a warning. > > > > Yes, that's correct. > > But if we have a longish deprecation period (i.e.

[R-pkg-devel] vignette issues

2016-09-12 Thread Bert Gunter
Folks: My stripless package passed all cran checks and built without issues. But I received the following message from the Windows build: - Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) : there is no package called ‘lme4' Quitting from lines

Re: [Rd] Announcing the R Documentation Task Force

2016-09-12 Thread Andrew Redd
To clarify, the developers, Duncan Murdoch, Michael Lawrence, and Martin Maechler, who are R Core Developers are participating in the project, but this should not be construed to be an endorsement from the R Core Developers as a whole, and the work of the R Documentation Task Force is not

Re: [Rd] R (development) changes in arith, logic, relop with (0-extent) arrays

2016-09-12 Thread Radford Neal
> > But isn't the intent to make it an error later? So I assume we're > > debating making it an error, not just a warning. > > Yes, that's correct. > But if we have a longish deprecation period (i.e. where there's > only a warning) all important code should have been adapted > before

Re: [Rd] R (development) changes in arith, logic, relop with (0-extent) arrays

2016-09-12 Thread Martin Maechler
> Radford Neal > on Fri, 9 Sep 2016 10:29:14 -0400 writes: >> Radford Nea: >> > So it may make more sense to move towards consistency in the >> > permissive direction, rather than the restrictive direction. >> >> > That would mean allowing

Re: [Bioc-devel] Merging two CharacterList objects doesn't work in Bioc-devel

2016-09-12 Thread Leonardo Collado Torres
Thanks Hervé for fixing this! Best, Leo On Sat, Sep 10, 2016 at 5:47 AM, Hervé Pagès wrote: > Hi Leonardo, > > Not really intended. Should be addressed in S4Vectors 0.11.14. > > Cheers, > H. > > > On 09/08/2016 12:14 PM, Leonardo Collado Torres wrote: >> >> Hi, >> >> With

Re: [R-pkg-devel] Some windows binaries missing from PACKAGES, 3.3 & 3.4

2016-09-12 Thread Uwe Ligges
I guess they got corrupted during some system problems on winbuilder last night, new (complete) versions are already waiting to be synced by the CRAN master server (without manual interaction). Best, Uwe On 12.09.2016 12:00, Gábor Csárdi wrote: Dear all, I accidentally noticed that some

Re: [Bioc-devel] moving packages

2016-09-12 Thread Arunkumar Srinivasan
Hi Hervé, sure, thanks! On 6 September 2016 at 20:20:46, Hervé Pagès (hpa...@fredhutch.org) wrote: Hi Arun, Yes, let's please wait until the review process is over before you move gread to another account on github. I'm sorry that the review process is taking so long. I was away for a

[R-pkg-devel] Some windows binaries missing from PACKAGES, 3.3 & 3.4

2016-09-12 Thread Gábor Csárdi
Dear all, I accidentally noticed that some windows binary packages are missing from PACKAGES and PACKAGES.gz. I have seen it for 3.3 and 3.4, but not for 3.2, although I haven't systematically checked it. This includes packages that haven't been updated for a while, e.g. my pkgconfig package