Michael,
this is really a CRAN question rather than a package question so you may have
more luck asking CRAN, but generally it is not a a good idea to have strong
dependencies (Depends/Imports) on Bioconductor packages. If you want to use
non-CRAN packages I would recommend weak depends like
> Gábor Csárdi writes:
Thanks. c81206 changes to use
user <- Sys.info()[["effective_user"]]
which afawct should always give the same as the uname for files created
by the current user. Pls check: if not, we can go for something like
foo <- function() {
writeLines("ABC", tf <-
On Thu, 18 Nov 2021, Henrik Bengtsson wrote:
Hi,
the following question sprung out of a package settings option warn=-1
to silence warnings, but those warnings were still caught by
withCallingHandlers(..., warning), which the package author did not
anticipate. The package has been updated to
Hi,
the following question sprung out of a package settings option warn=-1
to silence warnings, but those warnings were still caught by
withCallingHandlers(..., warning), which the package author did not
anticipate. The package has been updated to use suppressWarnings()
instead, but as I see a
I guess I failed to explain:
In the yaml section of the rmarkdown I can only use a single R expression;
i.e., I can not write:
```
configuration: !r data('somedata', package="xyz"); somedata$uvw
```
because these are two expressions.
I could write:
xyz::somedata$uvw
So to rephrase my
Hi Witold,
I am not sure what the use case is for loading data in the yaml header.
If you're swapping out data for your vignettes, perhaps your introduction
chunks could contain the code to load the data.
In any case, I recommend that you use `data("dataset", package = "package")`
to load the
Hi,
I with BiocCheck I am getting a warning that my packages uses LazyData:
true.
So far some of the package vignettes loaded the data in the params
section of the Rmd file e.g.,
---
title:
...
...
params:
configuration: !r data(prolfqua::data_ionstar);
> Duncan Murdoch
> on Mon, 15 Nov 2021 13:06:23 -0500 writes:
> I'd recommend responding now with a pointer to that bug
> report: whoever at CRAN is dealing with your package
> doesn't necessarily know about the bug report. You might
> or might not need to make a
> Gábor Csárdi
> on Wed, 17 Nov 2021 16:11:43 +0100 writes:
> Hi all,
> AFAICT https://stat.ethz.ch/R/daily/R-patched.tar.gz is
> still R 4.0.5 patched.
> Probably needs a branch bump. FYI, Gabor
Yes; this has been an oversight by me (back in March).
It's amazing
My addresses are phil.ange...@gmail.com (not philipp) and
flying-sh...@web.de.
I’ll add a key as soon as I’m able to log in.
Am Mo., 15. Nov. 2021 um 15:56 Uhr schrieb Nitesh Turaga <
nturaga.b...@gmail.com>:
> You have to activate the account at
>
10 matches
Mail list logo
