Re: [Bioc-devel] BiocParallel load balancing and runtime

2023-08-08 Thread Anna Plaxienko
n parallel): > > brukar system brukt > 0.000 0.004 0.088 > brukar system brukt > 0.114 0.001 1.336 > brukar system brukt > 0.074 0.124 0.060 > > How does that work on your actual data? > > Best, > Waldir > > ti., 08.08.2023 kl. 13.10 +0200, skrev Anna

[Bioc-devel] BiocParallel load balancing and runtime

2023-08-08 Thread Anna Plaxienko
Hi all! I'm switching from the base R *parallel* package to *BiocParallel* for my Bioconductor submission and I have two questions. First, I wanted advice on whether I've implemented load balancing correctly. Second, I've noticed that the running time is about 15% longer with BiocParallel. Any