Re: [Rd] Plotting an agnes tree with images instead of labels?

2010-11-24 Thread Bálint Czúcz
Hi Darfunkel, It is not agnes, but similar plots can be achieved using ctree() and plot.BinaryTree() in package party. FWIW. Bálint -- Bálint Czúcz Institute of Ecology and Botany of the Hungarian Academy of Sciences H-2163 Vácrátót, Alkotmány u. 2-4. HUNGARY Tel: +36 28 360122/137  +36 70

[Rd] Reference Classes: how to clone/copy instances?

2010-11-24 Thread Janko Thyson
Dear list, I don't know what's the correct term for this in the OOP context, but is it possible to clone/copy an instance of a reference class (say 'a') so that I get an *autonomous* second instance 'b'? Autonomous in the sense that changes to 'a' do not affect 'b'. I know that this is somewhat

[Rd] nonparametric analysis of covariance

2010-11-24 Thread Daniela Recchia
Hi there, I want to do a nonparametric covariance analysis and I have tried to use the package sm function sm.ancova but it didn't work for me because I have more then one covariates (I have 18 covariates and 3 factors). I want to analyse for one factor (who has 13 levels) where the

Re: [Rd] nonparametric analysis of covariance

2010-11-24 Thread Ben Bolker
Daniela Recchia daniela_recchia at yahoo.com.br writes: I want to do a nonparametric covariance analysis and I have tried to use the package sm function sm.ancova but it didn't work for me because I have more then one covariates (I have 18 covariates and 3 factors). [snip snip] Wrong

Re: [Rd] installing RMySQL (PR#13633)

2010-11-24 Thread Wonsang You
I guess that you already solved the error in installing the R package RMySQL. Recently, I also suffered from the same problem in Ubuntu 10.10. I would like to report my solution. I just installed a linux package libmysqlclient-dev which contains MySQL database development files and headers.

Re: [Rd] installing RMySQL (PR#13633)

2010-11-24 Thread Dirk Eddelbuettel
On 24 November 2010 at 04:06, Wonsang You wrote: | | I guess that you already solved the error in installing the R package RMySQL. | Recently, I also suffered from the same problem in Ubuntu 10.10. I would | like to report my solution. | | I just installed a linux package libmysqlclient-dev

[Rd] segfault interest?

2010-11-24 Thread ivo welch
in a long program, I ran into  *** caught segfault *** address 0xdc3f9b48, cause 'memory not mapped' Traceback:  1: rep.int(seq_len(nx), rep.int(rep.fac, nx))  2: rep.int(rep.int(seq_len(nx), rep.int(rep.fac, nx)), orep)  3: expand.grid(seq_len(nx), seq_len(ny))  4: merge.data.frame(d, ss)  5:

Re: [Rd] segfault interest?

2010-11-24 Thread Duncan Murdoch
On 24/11/2010 11:18 AM, ivo welch wrote: in a long program, I ran into *** caught segfault *** address 0xdc3f9b48, cause 'memory not mapped' Traceback: 1: rep.int(seq_len(nx), rep.int(rep.fac, nx)) 2: rep.int(rep.int(seq_len(nx), rep.int(rep.fac, nx)), orep) 3: expand.grid(seq_len(nx),

Re: [Rd] segfault interest?

2010-11-24 Thread ivo welch
I just figured out what is happening. The root drive (presumably OSX virtual memory) becomes depleted. The error message about memory not mapped was a hint, too. So, not really R's fault. However, I wonder whether R can be made to abort more gracefully, or at least trap the error message and