Hi Brian and Uwe,
Given my package passes all checks but I have received no further responses
since your initial reply, I assume you are no longer interested in the package
Rigroup-0.84.0. Your concerns about my chosen license being too vague GPL |
LGPL is in direct contradiction to what your
thanks. yes, I was considering to use as.character(f) but your solution
2 is much better -- did not know ' was a R function as well. just
checked: model.frame does not get confused and this will be used to
evaluate formula by all functions in my packages.
however, there could be related problems
The problem is that if you don't just use the PC for running R but use
it to run other programs too then any program and that utilizes
Windows batch scripts making use of find.exe or sort.exe likely won't
work if Rtools is on your path.
The fact that devtools, batchfiles and Rcpp have
On Sun, Apr 21, 2013 at 8:18 AM, Hadley Wickham h.wick...@gmail.com wrote:
The problem is that if you don't just use the PC for running R but use
it to run other programs too then any program and that utilizes
Windows batch scripts making use of find.exe or sort.exe likely won't
work if Rtools
Because it can conflict with other Windows software unless you add a
layer over it. What other popular software that runs on Windows has
these problems? I can't think of any. The closest I can come up with
was that for a short time after git was ported to Windows it would
change the font
On Sun, Apr 21, 2013 at 9:49 AM, Hadley Wickham h.wick...@gmail.com wrote:
Because it can conflict with other Windows software unless you add a
layer over it. What other popular software that runs on Windows has
these problems? I can't think of any. The closest I can come up with
was that
Because it can conflict with other Windows software unless you add a
layer over it. What other popular software that runs on Windows has
these problems? I can't think of any. The closest I can come up with
was that for a short time after git was ported to Windows it would
change the font
[Env: OS: Win Xp; R 2.15.2; IDE: eclipse/StatET]
Each time I update my heplots package, I get warnings from R CMD check
on R-Forge,
* checking sizes of PDF files under ‘inst/doc’ ... WARNING
‘gs+qpdf’ made some significant size reductions:
compacted ‘HE-examples.pdf’ from 739Kb to 366Kb
On 21.04.2013 19:28, Michael Friendly wrote:
[Env: OS: Win Xp; R 2.15.2; IDE: eclipse/StatET]
Each time I update my heplots package, I get warnings from R CMD check
on R-Forge,
* checking sizes of PDF files under ‘inst/doc’ ... WARNING
‘gs+qpdf’ made some significant size reductions:
While as a Linux user who has not so far been banished to Winland I have
not experienced this problem, it seems to be the type of issue where a
how to, for example, on the R Wiki, would be helpful. Moreover, surely
this is a name conflict on different platforms, so possibly a list of
these
On Sun, Apr 21, 2013 at 12:57 PM, Hadley Wickham h.wick...@gmail.com wrote:
Because it can conflict with other Windows software unless you add a
layer over it. What other popular software that runs on Windows has
these problems? I can't think of any. The closest I can come up with
was that
On 4/21/2013 1:47 PM, Uwe Ligges wrote:
Since vignettes are re-built from sources and then installed into
inst/doc, I don't see why
PDF compaction cannot be run as part of the build process. That is, if
R CMD check --as-cran detects a problem, shouldn't there be some
option for
R CMD build
I (as well) keep a specific Rsetup.bat file for launching Windows
cmd.exe with the proper PATH etc setup for build R packages etc. It's
only after this thread I gave it a second thought; you can indeed
temporarily set the PATH via ~/.Rprofile or ~/.Renviron, which *are*
processed at the very
PS. Hadley, is this what you meant when you wrote Better solutions
(e.g. Rstudio and devtools) temporarily set the path on when you're
calling R CMD *., or those approaches are only when you call 'R CMD'
from the R prompt? I believe the latter, but I just want to make sure
I didn't miss
On Sun, Apr 21, 2013 at 6:17 PM, Henrik Bengtsson h...@biostat.ucsf.edu wrote:
I (as well) keep a specific Rsetup.bat file for launching Windows
cmd.exe with the proper PATH etc setup for build R packages etc. It's
only after this thread I gave it a second thought; you can indeed
temporarily
Well, color me confused as heck. I've upgraded to R 3.0 so that I can bring
my packages up to date, but the instructions surrounding Rtools30 are not a
model of clarity.
On Sun, Apr 21, 2013 at 4:04 PM, Gabor Grothendieck ggrothendi...@gmail.com
wrote:
On Sun, Apr 21, 2013 at 6:17 PM, Henrik
Here's the short answer: Whatever you used to do should still work.
I started this thread, not knowing that it was going to get sucked into
a whirlpool on the fringes of an operating system religious war. My
sincerest apologies to everyone who has gotten confused as a consequence.
I only
Hi Michael,
On Sat, Apr 20, 2013 at 12:18 AM, Michael Love
michaelisaiahl...@gmail.com wrote:
hi Steve,
Thanks. Can you send a minimal example of the error? I can provide an
alternate formula without error:
dds - makeExampleDESeqDataSet()
design(dds) - formula(~ condition)
rld -
Hi Robert,
On Fri, 2013-04-19 at 11:51 -0400, Robert M. Flight wrote:
...
The reason is alt-metrics. I thought it would be cool to have a little R
package that takes a supplied Bioconductor package name, and compares its
download statistics to the download statistics for all the other
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