Re: [Rd] R-devel does not compile under FreeBSD-7.0 CURRENT

2006-11-30 Thread Prof Brian Ripley
As I said to you privately, I believe this to be a make issue: does GNU make work? We don't guarantee R to work with other makes (although it usually does). My guess is that the problem is the missing .m in the .SUFFIXES list in Makeconf.in, but Solaris make and GNU make see no problem and it

Re: [Rd] strange error from R CMD check about xaxp

2006-11-30 Thread Prof Brian Ripley
I've also seen this checking randomForest. It looks like the result of memory corruption, so please try with valgrind and/or using gctorture. On Wed, 29 Nov 2006, Liaw, Andy wrote: Dear R-devel, Kurt had alerted me to the problem that the randomForest package that I maintain has been

Re: [Rd] R CMD check warning about boot ?

2006-11-30 Thread Uwe Ligges
Dirk Eddelbuettel wrote: Running R CMD check on a local package, I get * checking Rd files ... OK * checking Rd cross-references ... WARNING Error in .find.package(package, lib.loc) : there is no package called 'boot' Probably the boot installation in one of your libraries is

Re: [Rd] data.frame within a function (PR#9294) (cont'd)

2006-11-30 Thread Prof Brian Ripley
This is not to do with your subject line, and not a bug (and PR#9294 as been closed). You don't even say what you think the 'issue' is: it seems to be your lack of understanding of the scope rules. I get f2() ok Error in inherits(x, data.frame) : object dtf not found which is quite correct:

Re: [Rd] R CMD check warning about boot ?

2006-11-30 Thread Kurt Hornik
Uwe Ligges writes: Dirk Eddelbuettel wrote: Running R CMD check on a local package, I get * checking Rd files ... OK * checking Rd cross-references ... WARNING Error in .find.package(package, lib.loc) : there is no package called 'boot' Probably the boot installation in one of your

[Rd] use one custom package with multiple R versions?

2006-11-30 Thread Andrew Piskorski
with something like --prefix=/usr/local/R-2.4-branch-20061130 is straightforward, but are there any other best practices I should be aware of for using multiple R installs? In particular, I wonder how to best handle my custom R packages, some of which contain compiled C or Fortran. Is it safe to use

Re: [Rd] R CMD check warning about boot ?

2006-11-30 Thread Dirk Eddelbuettel
On 30 November 2006 at 12:37, Kurt Hornik wrote: | Uwe Ligges writes: | | Dirk Eddelbuettel wrote: | Running R CMD check on a local package, I get | | * checking Rd files ... OK | * checking Rd cross-references ... WARNING | Error in .find.package(package, lib.loc) : | there is no

Re: [Rd] use one custom package with multiple R versions?

2006-11-30 Thread Simon Urbanek
. Fetching the sources with Subversion and running configure with something like --prefix=/usr/local/R-2.4-branch-20061130 is straightforward, but are there any other best practices I should be aware of for using multiple R installs? Personally, I prefer using default prefix (i.e

Re: [Rd] use one custom package with multiple R versions?

2006-11-30 Thread Andrew Piskorski
On Thu, Nov 30, 2006 at 10:39:33AM -0500, Simon Urbanek wrote: Personally, I prefer using default prefix (i.e. the equivalent to -- prefix=/usr/local) and then use make install rhome=/usr/local/R/2.4 The advantage of this is that it will behave as if it was installed in the regular prefix

Re: [Rd] Web site link problems (PR#9401)

2006-11-30 Thread Ross Boylan
On Thu, Nov 30, 2006 at 10:59:13AM +0100, Peter Dalgaard wrote: [EMAIL PROTECTED] wrote: 2. http://www.r-project.org/posting-guide.html includes in the section Surprising behavior and bugs, make sure you read R Bugs in the R-faq. The latter is the link

[Rd] bug in arima?

2006-11-30 Thread A.I. McLeod
I don't think arima works exactly the way one would expect when there is differencing. What I think should happen is that by default the mean of the differenced series is estimated and if include.mean=F, then it is not. This is not what happens. Instead when there is differencing the

[Rd] bug in arima? (PR#9404)

2006-11-30 Thread aim
I don't think arima works exactly the way one would expect when there is differencing. What I think should happen is that by default the mean of the differenced series is estimated and if include.mean=F, then it is not. This is not what happens. Instead when there is differencing the

Re: [Rd] bug in arima? (PR#9404)

2006-11-30 Thread murdoch
On 11/30/2006 2:20 PM, [EMAIL PROTECTED] wrote: I don't think arima works exactly the way one would expect when there is differencing. What I think should happen is that by default the mean of the differenced series is estimated and if include.mean=F, then it is not. This is not what

[Rd] Arbeitsplatze in der Schweiz!

2006-11-30 Thread Emmeliano Juno
Finanzmanager (m/w) in freier Mitarbeit Für unser Unternehmen suchen wir Finanzmanager/innen (Porex GmbH) zur gelegentlichen oder regelmabigen Durchfuhrung von Uberweisungen zwischen unseren Kunden, Beratungen und Buchhaltung. Uber uns Porex GmbH ist eine Beratungs- und

[Rd] Arbeitsplatze in der Schweiz!

2006-11-30 Thread Emmeliano Juno
Finanzmanager (m/w) in freier Mitarbeit Für unser Unternehmen suchen wir Finanzmanager/innen (Porex GmbH) zur gelegentlichen oder regelmabigen Durchfuhrung von Uberweisungen zwischen unseren Kunden, Beratungen und Buchhaltung. Uber uns Porex GmbH ist eine Beratungs- und

[Rd] viral setClassUnion?

2006-11-30 Thread Martin Morgan
I'm looking for help with the following warning message: Subclass A of class numeric is not local and cannot be updated for new inheritance information; consider setClassUnion() in: .checkSubclasses(class1, classDef, class2, classDef2, where1) I see this with, e.g., R CMD INSTALL --clean in a

[Rd] printing coefficients with text

2006-11-30 Thread Ross Boylan
I want to print the coefficient estimates of a model in a way as consistent with other output in R as possible. stats provides the printCoefmat function for doing this, but there is one problem. I have an additional piece of textual information I want to put on the line with the other info on

[Rd] Magic Menu library loading error (PR#9405)

2006-11-30 Thread jleecbd
Full_Name: Jeff Lee Version: 2.4.0 OS: Mac OS X 10.4 (Tiger) Submission from: (NULL) (12.150.164.100) Just upgraded to an Intel based Mac. Upon launch, I receive the following error: 2006-11-30 12:39:36.870 R[407] *** -[NSBundle load]: Error loading code

Re: [Rd] order of levels in interaction()

2006-11-30 Thread Prof Brian Ripley
On Thu, 30 Nov 2006, Deepayan Sarkar wrote: Hi, ?interaction says: See Also: 'factor'; ':' where 'f:g' is the similar to 'interaction(f, g, sep=:)' when 'f' and 'g' are factors. This is not quite true (or maybe 'similar' is the operative word), since: f - factor(1:3); g -

Re: [Rd] Magic Menu library loading error (PR#9405)

2006-11-30 Thread stefano iacus
Jeff, this is not a bug report for R, and you already posted to R-Sig-mac (and get answered) Maybe you want to contact the author of MagicMenu (or what ever is the software you use) to understand why such bad interaction with R.app takes place. stefano On 01/dic/06, at 05:51, [EMAIL

Re: [Rd] Magic Menu library loading error (PR#9405)

2006-11-30 Thread stefano iacus
Jeff, maybe I confused your mail with a similar report. Apologizes. Anyway, this is not a proper R bug report. Next time, please, use (or search) R-Sig-Mac. Googling around, it seems that there is a MagicMenu which is installed by Stuffit. We don't load it in R.app at any time. stefano On

[Rd] Totally OutOfDebt Overnight

2006-11-30 Thread tasia gilbert
0ur Attorneys have discovered a loophole in the banking laws. With this discovery, we've been successfu1 at eliminating people's creditcarddebt with out them paying one more cent. WeGuarantee that we can help you with this. C0ntact us at 1--3 1 3--263--2706 The judgment of the jury was received

[Rd] promptClass misses methods

2006-11-30 Thread Ross Boylan
I've had repeated problems with promptClass missing methods, usually telling me a class has no methods when it does. In my current case, I've defined an S4 class mspathCoefficients with a print method setMethod(print, signature(x=mspathCoefficients), function(x, ...) { # etc The file promptClass

Re: [Rd] promptClass misses methods (addendum)

2006-11-30 Thread Ross Boylan
On Thu, Nov 30, 2006 at 10:29:06PM -0800, Ross Boylan wrote: I've had repeated problems with promptClass missing methods, usually telling me a class has no methods when it does. In my current case, I've defined an S4 class mspathCoefficients with a print method setMethod(print,