[Rd] R GUI editor window - help field does not return the help topic (PR#14146)

2009-12-16 Thread y_alperovych
Full_Name: Yan Alperovych Version: R 2.10.1, GUI 1.31 OS: Mac OS 10.6.2 Submission from: (NULL) (139.165.27.244) Hello everyone, I am not sure if I am at the right place to put this question, so don't hesitate to redirect me to the correct mailing list. My question is about the editor window

[Rd] apparently incorrect p-values from 2-sided Kolmogorov-Smirnov test (PR#14145)

2009-12-16 Thread allwrigh
This message is in MIME format. The first part should be readable text, while the remaining parts are likely unreadable without MIME-aware tools. --1132542651-1468968864-1260896436=:8788 Content-Type: TEXT/PLAIN; format=flowed; charset=US-ASCII I am using R version 2.6.2 (2008-02-08) on a

[Rd] Redirect standard output (PR#14148)

2009-12-16 Thread joemsong
Full_Name: Joe Song Version: 2.10.0 OS: Windows 7 Submission from: (NULL) (97.123.159.234) Symptom: The following command in R system(program run.log) would not redirect standard output to the file run.log. This bug did not exist on Windows XP, but appeared on Windows 7 when the same

[Rd] Flexclust barchart issue when mcol=NULL (PR#14150)

2009-12-16 Thread christopher . a . hane
Full_Name: Chris Hane Version: 2.10.1 OS: Windows Submission from: (NULL) (198.203.181.181) When using barchart in the flexcust package, setting mcol=NULL to avoid the lollipops causes an error. Each panel shows the text message Error using packet n replacement has length zero. where n is the

Re: [Rd] Redirect standard output (PR#14148)

2009-12-16 Thread Romain Francois
On 12/15/2009 09:20 PM, joems...@cs.nmsu.edu wrote: Full_Name: Joe Song Version: 2.10.0 OS: Windows 7 Submission from: (NULL) (97.123.159.234) Symptom: The following command in R system(program run.log) would not redirect standard output to the file run.log. This bug did not exist on

Re: [Rd] Redirect standard output (PR#14148)

2009-12-16 Thread Prof Brian Ripley
On Tue, 15 Dec 2009, joems...@cs.nmsu.edu wrote: Full_Name: Joe Song Version: 2.10.0 OS: Windows 7 Submission from: (NULL) (97.123.159.234) Symptom: The following command in R system(program run.log) would not redirect standard output to the file run.log. This bug did not exist on

Re: [Rd] Flexclust barchart issue when mcol=NULL (PR#14150)

2009-12-16 Thread Prof Brian Ripley
Please do read the section on 'BUGS' in the FAQ. This is not the bug-reporting address for package 'flexclust'. On Wed, 16 Dec 2009, christopher.a.h...@gmail.com wrote: Full_Name: Chris Hane Version: 2.10.1 OS: Windows Submission from: (NULL) (198.203.181.181) When using barchart in the

Re: [Rd] Redirect standard output (PR#14148)

2009-12-16 Thread Duncan Murdoch
On 15/12/2009 3:20 PM, joems...@cs.nmsu.edu wrote: Full_Name: Joe Song Version: 2.10.0 OS: Windows 7 Submission from: (NULL) (97.123.159.234) Symptom: The following command in R system(program run.log) would not redirect standard output to the file run.log. This bug did not exist on

[Rd] [R] R CMD check when package directory is symlinked

2009-12-16 Thread Prof. John C Nash
I've done a couple of searches and not found mention of the issue below, though some older scripts mention getting absolute paths for R CMD check. If the issue is new or unfamiliar I'll be happy to follow up and document it, but suspect it is in some sense already known and I've missed the

Re: [Rd] R GUI editor window - help field does not return the help topic (PR#14146)

2009-12-16 Thread Simon Urbanek
Please read the posting guide before submitting bug reports, especially if you don't even know that it's the proper way! I cannot reproduce the problem, so please supply the details as we kindly ask you to - at the very least sessionInfo()... Also the proper place for Mac-related questions is

Re: [Rd] Flexclust barchart issue when mcol=NULL

2009-12-16 Thread Friedrich Leisch
On Wed, 16 Dec 2009 07:05:11 +0100 (CET), christopher a hane (cah) wrote: Full_Name: Chris Hane Version: 2.10.1 OS: Windows Submission from: (NULL) (198.203.181.181) When using barchart in the flexcust package, setting mcol=NULL to avoid the lollipops causes an error. Each

Re: [Rd] R CMD check may not detect a code/documentation mismatch

2009-12-16 Thread Peter Dalgaard
[orig. correspondence below] Brian and Kurt have been sinking their teeth further into this. It turned out that there was a gotcha with the .Primitive functions like `:`, `.C`, etc., for which formals() always returns NULL. However, replacement with a check for typeof(f) == closure made things

Re: [Rd] R GUI editor window - help field does not return the help topic (PR#14146)

2009-12-16 Thread simon . urbanek
Yan, On Dec 16, 2009, at 10:13 AM, Yan ALPEROVYCH wrote: Hello Simon,=20 =20 I did read the posting guide, and I did as your colleague from the GUI = discussion instructed me to (Forwarded text bellow). It's ok, I got my = lesson.=20 =20 The session info: =20 sessionInfo() R version 2.10.1

Re: [Rd] apparently incorrect p-values from 2-sided Kolmogorov-Smirnov test (PR#14145)

2009-12-16 Thread tlumley
On Tue, 15 Dec 2009, allwr...@maths.ox.ac.uk wrote; (in part) x-1:5 y-c(2.5,4.5) ks.test(x,y) The value of the D_2,5 statistic is calculated as 0.4 correctly, but the p-value is stated by R as 1, though in fact it should be 20/21=0.9524 What we seem to have here is a rounding error

Re: [Rd] apparently incorrect p-values from 2-sided Kolmogorov-Smirnov (PR#14151)

2009-12-16 Thread tlumley
On Tue, 15 Dec 2009, allwr...@maths.ox.ac.uk wrote; (in part) x-1:5 y-c(2.5,4.5) ks.test(x,y) The value of the D_2,5 statistic is calculated as 0.4 correctly, but the p-value is stated by R as 1, though in fact it should be 20/21=0.9524 What we seem to have here is a rounding error

[Rd] ?setGeneric garbled (PR#14153)

2009-12-16 Thread ross
Full_Name: Ross Boylan Version: 2.10.0 OS: Windows XP Submission from: (NULL) (198.144.201.14) Some of the help for setGeneric seems to have been garbled. In the section Basic Use, 5th paragraph (where the example counts as a single line 3rd paragraph) it says quote Note that calling