On Wed, Feb 1, 2017 at 12:51 AM, Martin Morgan <
martin.mor...@roswellpark.org> wrote:
> Levi triggered the problem with install.packages("lazyeval",
> repos=biocinstallRepos(), which is an R-only command. Also, there have not
> been any changes to the logic of biocLite() in this regard, so the
On 01/31/2017 11:41 AM, Vincent Carey wrote:
On Mon, Jan 30, 2017 at 11:14 PM, Martin Morgan
>
wrote:
On 01/30/2017 09:52 AM, Levi Waldron wrote:
On Mon, Jan 30, 2017 at 12:23 AM, Martin Morgan
On Tue, Jan 31, 2017 at 3:30 PM, peter dalgaard wrote:
>
>> On 31 Jan 2017, at 18:56 , Avraham Adler wrote:
>>
>> Hello.
>>
>> When trying to unpack today's version of R-patched,
>
> From which source? The files from cran.r-project.org seems OK, both
> On 31 Jan 2017, at 18:56 , Avraham Adler wrote:
>
> Hello.
>
> When trying to unpack today's version of R-patched,
>From which source? The files from cran.r-project.org seems OK, both those in
>src/base-prerelease and those from ETHZ. Also, is it not "tar -xfz"
Hello.
When trying to unpack today's version of R-patched, I get the following error:
C:\R>tar -xf R-patched_2017-01-30.tar.gz
gzip: stdin: unexpected end of file
tar: Unexpected EOF in archive
tar: Unexpected EOF in archive
tar: Error is not recoverable: exiting now
I got the same error for
Hi Thomas,
This seems fully expected behaviour. Obviously unspecified arguments are
evaluated as missing regardless of a default value. So if you set mu as a
default, the function will call C_rnbinom with n, size and prob. As prob is
not specified you get the error one would expect. Specifying a
> Suharto Anggono Suharto Anggono via R-devel
> on Tue, 31 Jan 2017 15:43:53 + writes:
> Function 'aggregate.data.frame' in R has taken a different route. With
drop=FALSE, the function is also applied to subset corresponding to combination
of grouping
On Mon, Jan 30, 2017 at 11:14 PM, Martin Morgan <
martin.mor...@roswellpark.org> wrote:
> On 01/30/2017 09:52 AM, Levi Waldron wrote:
>
>> On Mon, Jan 30, 2017 at 12:23 AM, Martin Morgan
>> wrote:
>>
>>> It seems like this is a local cache of the rstudio file that
Function 'aggregate.data.frame' in R has taken a different route. With
drop=FALSE, the function is also applied to subset corresponding to combination
of grouping variables that doesn't appear in the data (example 2 in
https://stat.ethz.ch/pipermail/r-devel/2017-January/073678.html).
Because
See https://stat.ethz.ch/pipermail/bioc-devel/2017-January/010396.html
On 01/31/2017 07:57 AM, Christian Arnold wrote:
Hi,
it appears that in the newest devel version,
fetchExtendedChromInfoFromUCSC is broken (again). I found an earlier
post here:
Hi,
it appears that in the newest devel version,
fetchExtendedChromInfoFromUCSC is broken (again). I found an earlier
post here:
https://www.mail-archive.com/bioc-devel@r-project.org/msg06193.html,
which however states that this has been fixed already in the previous
version 1.11.2 of the
Thank you. Makes sense. It is *very* helpful to have R CMD check provide
that.
Cathy Lee Gierke
*“Darkness cannot drive out darkness: only light can do that. Hate cannot
drive out hate: only love can do that.” *
*“The arc of the moral universe is long, but it bends towards justice.”*
> Dirk Eddelbuettel
> on Mon, 30 Jan 2017 20:50:19 -0600 writes:
> On 30 January 2017 at 09:58, Kevin Ushey wrote:
> | The correct thing to do is indeed import any functions from any R
packages
> | you use, base or otherwise. The simplest fix, if you
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