Hi,
assume I have an existing file 'pathname' and I want to rename it to
'pathnameN' (which does not exist). I use:
res - file.rename(pathname, pathnameN);
Is it guaranteed that:
(1) if res == TRUE, the file now have name 'pathnameN' and there is no
file with name 'pathname'?
(2) if res ==
Hi.
I can use the src/ directory to create executable, cf. Section
'Package subdirectories' in 'Writing R Extensions:
A few packages use the src directory for purposes other than making a
shared object (e.g. to create executables). Such packages should have
files src/Makefile and
On Fri, Feb 18, 2011 at 10:43 PM, Friedrich Leisch
friedrich.lei...@stat.uni-muenchen.de wrote:
On Fri, 18 Feb 2011 22:00:28 -0600,
Paul Johnson (PJ) wrote:
Hi, everybody
I have an account on Dreamhost.com and when I renewed it recently,
their message said my usage of storage and
On Sun, Feb 13, 2011 at 5:30 AM, Duncan Murdoch
murdoch.dun...@gmail.com wrote:
On 11-02-12 4:57 PM, Henrik Bengtsson wrote:
FYI, I'm sure the following is a temporary issue, but in case it slips
through, I want to raise it here. On Windows 7 64-bit, running Rcmd
check on R devel gives:
I
Hi.
On Sun, Feb 13, 2011 at 10:18 AM, TakeoKatsuki takeo.kats...@gmail.com wrote:
Hi Henrik,
It would be nice if functions of the matrixStats package can handle array
data.
For example, rowSums() of the base package sums along the third axis of an
array by rowSums(x, dim=2).
That is a
Hi,
this is about iterating over any data type/object 'xs' in the for-loop
constructor:
for (x in xs) { ... }
From help(for), on can read that 'xs' has to be An expression
evaluating to a vector (including a list and an expression) or to a
pairlist or NULL. A factor value will be coerced to a
FYI, I'm sure the following is a temporary issue, but in case it slips
through, I want to raise it here. On Windows 7 64-bit, running Rcmd
check on R devel gives:
* using R version 2.13.0 Under development (unstable) (2011-02-11 r54330)
* using platform: x86_64-pc-mingw32 (64-bit)
* using
On Sat, Feb 12, 2011 at 4:26 PM, Henrik Bengtsson h...@biostat.ucsf.edu wrote:
Never ever use JPEG for bitmap data plots. Use PNG instead. See
attach image (origin unknown; it is *not* an xkcd comics).
Oops - missed to include the following:
To generate PNGs, you can do it manually
On Wed, Feb 9, 2011 at 11:25 AM, Simon Urbanek
simon.urba...@r-project.org wrote:
Ben,
I have committed something analogous to R-devel (your rotation code was not
unlike mine, I replicated the color handling from R internals to be
consistent, I fixed the drawing limits and added a check for
On Wed, Feb 9, 2011 at 11:53 AM, Simon Urbanek
simon.urba...@r-project.org wrote:
On Feb 9, 2011, at 2:36 PM, Henrik Bengtsson wrote:
On Wed, Feb 9, 2011 at 11:25 AM, Simon Urbanek
simon.urba...@r-project.org wrote:
Ben,
I have committed something analogous to R-devel (your rotation code
Also, if it it adds any value to what you are looking for, the output
of serialize() also has header information, cf. R-devel thread 'Small
inconsistency in serialize() between R versions and implications on
digest()' started March 7, 2007:
be passed to serialize(), but it doesn't sound like it is
too urgent to add that. Any updates to digest() will also be backward
compatible, so as long as you use digest() you shouldn't have to worry
about consistency.
/Henrik
Hadley
On Mon, Feb 7, 2011 at 4:06 PM, Henrik Bengtsson h
On Tue, Feb 1, 2011 at 4:46 PM, Paul Murrell p.murr...@auckland.ac.nz wrote:
Hi
On 1/02/2011 9:22 p.m., Martin Maechler wrote:
Henrik Bengtssonh...@biostat.ucsf.edu
on Mon, 31 Jan 2011 11:16:59 -0800 writes:
Hi, str() on raster objects fails for certain dimensions. For
Hi,
str() on raster objects fails for certain dimensions. For example:
str(as.raster(0, nrow=1, ncol=100))
'raster' chr [1, 1:100] #00 #00 #00 #00 ...
str(as.raster(0, nrow=1, ncol=101))
Error in `[.raster`(object, seq_len(max.len)) : subscript out of bounds
This seems to
Hi.
The following results in a data.frame with column names starting with A.:
X - data.frame(x=1:2, y=1:2)
X
x y
1 1 1
2 2 2
data.frame(A=X)
A.x A.y
1 1 1
2 2 2
whereas with a single-column matrix you won't get A.:
Y - X[,1,drop=FALSE];
Y
x
1 1
2 2
data.frame(A=Y);
x
message (below).
Browsing the SVN logs for R devel I see that Brian Ripley is the one
who has done all the great work related to this one.
Thank you!
/Henrik
On Tue, Nov 23, 2010 at 6:12 AM, Henrik Bengtsson h...@biostat.ucsf.edu wrote:
Hi,
I've noticed that as.vector() always allocates a new
] LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
/Henrik
(Just wanted to share these observations; not really using this feature myself).
On Thu, Nov 25, 2010 at 10:12 AM, Henrik Bengtsson h
First, if you look carefully, then you see that argument 'files'
should specify *filepaths*, i.e. directories and not specific files.
Thus, if you for instance place your files in directory foo/ and
then call
tar(foo.tar, files=foo/);
you would do the right thing.
HOWEVER, looking at the
FYI, this topic was discussed in R-help thread 'cat(), Rgui, and
support for carriage return \r...' on March 17-29, 2006:
https://stat.ethz.ch/pipermail/r-help/2006-March/101863.html
Some modifications to Rgui's behavior was brought up and (I think)
implemented at the time.
As far as I
On Thu, Nov 25, 2010 at 10:02 AM, Henrik Bengtsson h...@biostat.ucsf.edu
wrote:
FYI, this topic was discussed in R-help thread 'cat(), Rgui, and
support for carriage return \r...' on March 17-29, 2006:
https://stat.ethz.ch/pipermail/r-help/2006-March/101863.html
Some modifications
Hi,
I've noticed that as.vector() always allocates a new object, e.g.
x - 1:10;
x - as.vector(x);
tracemem(x);
[1] 0x05622db8
x - as.vector(x);
tracemem[0x05622db8 - 0x05622ec0]: as.vector
x - as.vector(x);
tracemem[0x05622ec0 - 0x05622f18]: as.vector
On Mon, Nov 15, 2010 at 3:26 PM, Hadley Wickham had...@rice.edu wrote:
Hi all,
I'm trying to understand how the search path and namespaces interact.
For example, take the devtools package which suggests the testthat
package. Here's what the search path looks like after I load each of
those
See devSet() in R.utils, e.g.
library(R.utils);
graphics.off();
devSet(6);
devSet(myFigure); # Also possible
print(devList());
myFigure Device 6
26
/Henrik
On Sat, Nov 13, 2010 at 2:44 AM, Petr Savicky savi...@cs.cas.cz wrote:
I am preparing a script, which uses three
2010/11/4 Uwe Ligges lig...@statistik.tu-dortmund.de:
On 03.11.2010 19:26, Henrik Bengtsson wrote:
On Wed, Nov 3, 2010 at 9:50 AM, Uwe Ligges
lig...@statistik.tu-dortmund.de wrote:
Yes, .svn is special cased.
Good.
Note that it does not seem to be the case for the *.zip archive, only
Hi.
On Thu, Nov 4, 2010 at 7:42 AM, Tim Hesterberg timhesterb...@gmail.com wrote:
On Wed, Nov 3, 2010 at 3:54 PM, Henrik Bengtsson h...@biostat.ucsf.eduwrote:
Hi, consider this one as an FYI, or a seed for further discussion.
I am aware that many traps on sample() have been reported over
Is the dash in –lR really a dash? Shouldn't it be -lR so it is
interpreted as a flag/option?!
My $.02
/H
On Wed, Nov 3, 2010 at 5:20 AM, aysun.cetinyu...@ulg.ac.be wrote:
Dear developers,
I am trying to run some C/ Fortran code in R. Although I have experience with
that in Windows
Hi, consider this one as an FYI, or a seed for further discussion.
I am aware that many traps on sample() have been reported over the
years. I know that these are also documents in help(sample). Still
I got bitten by this while writing
sample(units, size=length(units));
where 'units' is an
in R?
/Henrik
On Wed, Nov 3, 2010 at 3:54 PM, Henrik Bengtsson h...@biostat.ucsf.eduwrote:
Hi, consider this one as an FYI, or a seed for further discussion.
I am aware that many traps on sample() have been reported over the
years. I know that these are also documents in help(sample). Still
On Wed, Nov 3, 2010 at 11:07 AM, Henrik Bengtsson h...@biostat.ucsf.edu wrote:
On Wed, Nov 3, 2010 at 11:02 AM, Henrique Dallazuanna www...@gmail.com
wrote:
The resample function in the example section from sample help page does it
or not?
Yes, I just noticed that one [at the very end
On Wed, Nov 3, 2010 at 9:50 AM, Uwe Ligges
lig...@statistik.tu-dortmund.de wrote:
Yes, .svn is special cased.
Good.
Note that it does not seem to be the case for the *.zip archive, only
for the *.tar.gz archive, as I showed.
/H
Uwe Ligges
On 02.11.2010 23:53, Henrik Bengtsson wrote
In Section 'Package subdirectories' of 'Writing R Extensions', it
says about the inst/ directory that:
The contents of the inst subdirectory will be copied recursively to
the installation directory (except perhaps hidden files with names
starting with ‘.’).
Indeed, on Windows with R v2.12.0
On Fri, Oct 29, 2010 at 10:53 AM, Hervé Pagès hpa...@fhcrc.org wrote:
Hi,
On 10/29/2010 12:17 AM, Prof Brian Ripley wrote:
I have no idea what 'timeout' means, but that *should* take an
extraordinarily long time (it is at least quadratic in the input
length). This is the point of hashing --
FYI,
the option 'help.ports' is not document under help(options). Should
it? It is documented under help(startDynamicHelp, package=tools).
This is for for R v2.13.0dev and Rv2.12.0.
/Henrik
__
R-devel@r-project.org mailing list
FYI, in case you are not aware of it,
both
http://cran.r-project.org/bin/windows/base/rpatched.html
http://cran.r-project.org/bin/windows/base/rdevel.html
link to old builds (2010-10-14 r53300).
/Henrik
__
R-devel@r-project.org mailing list
For whatever it is worth, a long time ago I had this problem when ssh
-X connecting to a server and doing simple plots such as plot(1:10).
It was painfully slow and I could see how each data points was
plotted. After using X11.options(type=Xlib) in R things was back to
normal (fast) again. I
Off topic, but since I've observe both styles, does anyone know the
history behind/reason for using ## instead of a single # to start
comments in R. I know some editors do this by default. Is it because
in C it is easier to distinguish (search/replace/...) comments from C
preprocessor directives
Each of the following calls crash (core dumps) R (R --vanilla) on
various versions and OSes:
regexpr(a{2-}, )
sub(a{2-}, )
gsub(a{2-}, )
EXAMPLES:
sessionInfo()
R version 2.11.1 Patched (2010-09-16 r52949)
Platform: i386-pc-mingw32 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max ==
, 2010, at 11:04 PM, Henrik Bengtsson wrote:
Each of the following calls crash (core dumps) R (R --vanilla) on
various versions and OSes:
regexpr(a{2-}, )
sub(a{2-}, )
gsub(a{2-}, )
EXAMPLES:
sessionInfo()
R version 2.11.1 Patched (2010-09-16 r52949)
Platform: i386-pc-mingw32 (32-bit
On Tue, Sep 21, 2010 at 9:20 PM, David Winsemius dwinsem...@comcast.net wrote:
On Sep 22, 2010, at 12:12 AM, Henrik Bengtsson wrote:
David's post made me realize that I got the sub()/gsub() lines wrong.
It should be:
regexpr(a{2-}, )
sub(a{2-}, , )
gsub(a{2-}, , )
Still no crash
FYI and for the R-forge maintainers information:
Trying to access http://r-forge.r-project.org/ at this very moment gives:
An error occured in the logger. ERROR: could not extend relation
1663/19060/19983: No space left on device HINT: Check free disk
space.
/Henrik
Hi,
in R CMD check, the version of the package being checked is reported, e.g.
Thu Sep 9 05:02:30 2010: Checking package R.utils (SVN revision 399) ...
* using log directory ‘/srv/R/R.check/R-devel/PKGS/R.utils.Rcheck’
* using R version 2.12.0 Under development (unstable) (2010-09-07 r52876)
*
On Tue, Sep 14, 2010 at 6:23 PM, Benjamin Tyner bty...@gmail.com wrote:
Hi,
I'm aware that the language definition states R objects are often coerced
to different types during computations. Two questions:
1. Is it possible to configure the R environment so that, for example,
coercion from
Hi, I'm just following your messages the overhead that the code for
dealing with possible NA/NaN values brings. When I was setting up
part of the matrixStats package, I've also though about this. I was
thinking of having an additional logical argument 'hasNA'/'has.na'
where you as a user can
trying to
figure out how that tool works.
On Mon, Jul 26, 2010 at 5:20 PM, Duncan Murdoch
murdoch.dun...@gmail.com wrote:
On 26/07/2010 10:25 AM, Henrik Bengtsson wrote:
Shame on me; I put important only in the subject line.
It's Windows Vista Business 32-bit (Service Pack 2) English
On Wed, Jul 28, 2010 at 6:24 PM, Duncan Murdoch
murdoch.dun...@gmail.com wrote:
On 28/07/2010 11:06 AM, Duncan Murdoch wrote:
On 28/07/2010 9:37 AM, Henrik Bengtsson wrote:
Hi,
by pure luck, I discovered that it has to do with the number of
characters (or similar) in the Windows system
: 9431192a7274b0ee769861df31ecee58
Additional Information 3: f768
Additional Information 4: 930d06d3f6aed4162dca7601993082f5
Anyone knows if there anything else I can do to provide more debug
information on this?
/Henrik
On Sat, May 22, 2010 at 10:37 AM, Henrik Bengtsson h...@stat.berkeley.edu
wrote
Shame on me; I put important only in the subject line.
It's Windows Vista Business 32-bit (Service Pack 2) English with the
latest updates.
/Henrik
On Mon, Jul 26, 2010 at 1:30 PM, Duncan Murdoch
murdoch.dun...@gmail.com wrote:
On 26/07/2010 5:15 AM, Henrik Bengtsson wrote:
Just FYI: Problem
On Fri, Jul 9, 2010 at 6:49 AM, Bryan W. Lewis bwaynele...@gmail.com wrote:
Dear R developers,
The slow performance of serializing to a raw vector on Windows is an
issue that has appeared in this list before.
My guess is that you are referring to:
[Rd] serialize() to via temporary file is
See packages R.oo and proto.
If you wish to do it yourself, you want to utilize environments for this.
/Henrik
On Thu, Jul 8, 2010 at 6:52 AM, Paul Bailey pdbai...@umd.edu wrote:
I'm working with a large object that I want to modify slightly in a function.
Pass-by-reference would make a lot
...and for tracing memory allocations/duplications, see tracemem().
/Henrik
On Thu, Jul 8, 2010 at 9:14 AM, Henrik Bengtsson h...@stat.berkeley.edu wrote:
See packages R.oo and proto.
If you wish to do it yourself, you want to utilize environments for this.
/Henrik
On Thu, Jul 8, 2010
On Tue, Jul 6, 2010 at 11:53 AM, Martin Maechler
maech...@stat.math.ethz.ch wrote:
HenrikB == Henrik Bengtsson h...@stat.berkeley.edu
on Mon, 5 Jul 2010 22:53:59 +0200 writes:
HenrikB ...and, of course, just after sending it off I found out that
from R
HenrikB v2.11.0
For what it's worth, see arrayIndex() in R.utils, e.g.
# Single index
print(arrayIndex(21, dim=c(4,3,3)))
# Multiple indices
print(arrayIndex(20:23, dim=c(4,3,3)))
# Whole array
x - array(1:30, dim=c(5,6))
print(arrayIndex(1:length(x), dim=dim(x)))
# Find (row,column) of maximum value
m -
...and, of course, just after sending it off I found out that from R
v2.11.0 there is now an arrayInd() in the 'base' package doing exactly
the same thing. See help(arrayInd).
/Henrik
On Mon, Jul 5, 2010 at 10:49 PM, hb h...@stat.berkeley.edu wrote:
For what it's worth, see arrayIndex() in
This is just a note/wishlist/for the record:
With
foo1 - function() {
res;
}
foo2 - function() {
for (i in c()) res - 1;
res;
}
foo3 - function() {
while (FALSE) res - 1;
res;
}
foo4 - function() {
if (FALSE) res - 1;
res;
}
we get:
foo1()
Error in foo1() : object 'res' not
On Mon, May 31, 2010 at 10:41 AM, Barry Rowlingson
b.rowling...@lancaster.ac.uk wrote:
On Sun, May 30, 2010 at 5:50 PM, Romain Francois
rom...@r-enthusiasts.com wrote:
Hi,
Sure. I could and I would provide a patch. Since this is more of a nice to
have, I wanted to first find out whether
Using the latest developers version of R [2.12.0 Under development
(unstable) (2010-05-21 r52061)], R.exe crashes:
%ProgramFiles%/R/R-2.12.0dev/bin/i386/R.exe
with Windows reporting:
Problem signature:
Problem Event Name: APPCRASH
Application Name: R.exe
Application Version:
Hi,
I'd like to suggest that DESCRIPTION and/or NEWS files, or other
information revealing the version, would be added to the different
Rtools compilations (http://www.murdoch-sutherland.com/Rtools/).
Currently it's not easy to figure out which version is installed.
Another suggestion is to have
In 'R for Windows FAQ' for R version 2.11.0 Patched (2010-05-11
r51982) you can read:
[2.29] Can both 32- and 64-bit R be installed on the same machine?
Obviously, only relevant if the machine is running a 64-bit version of Windows.
Yes, with a little care. For R 2.11.x they should be installed
On Sun, Apr 25, 2010 at 1:09 PM, Duncan Murdoch
murdoch.dun...@gmail.com wrote:
On 24/04/2010 1:15 PM, Christopher Brown wrote:
I looked through the documentation and the mailing lists and could not
find an answer to this. My apologies if it has already been answered.
If it has, a pointer
Hi,
On Thu, Apr 15, 2010 at 3:45 PM, Simon Urbanek
simon.urba...@r-project.org wrote:
On Apr 15, 2010, at 2:26 AM, Henrik Bengtsson wrote:
For a couple of days, MacOS X binaries are not build on CRAN (for my
recently uploaded packages only?):
AFAICS your package was posted on Apr 13 so
It could be that you define the below in two different source files
and you are only updating the first and it is overwritten by the
second which you never edit? /Henrik
On Thu, Apr 15, 2010 at 4:21 PM, Adrian Waddell adr...@waddell.ch wrote:
Hello there,
I define a accessor method for one of
On Tue, Apr 20, 2010 at 3:58 PM, Simon Urbanek
simon.urba...@r-project.org wrote:
On Apr 20, 2010, at 2:57 AM, Henrik Bengtsson wrote:
Hi,
On Thu, Apr 15, 2010 at 3:45 PM, Simon Urbanek
simon.urba...@r-project.org wrote:
On Apr 15, 2010, at 2:26 AM, Henrik Bengtsson wrote:
For a couple
:
On Mon, 12 Apr 2010, William Dunlap wrote:
-Original Message-
From: r-devel-boun...@r-project.org
[mailto:r-devel-boun...@r-project.org] On Behalf Of Henrik Bengtsson
Sent: Monday, April 12, 2010 8:24 AM
To: Duncan Murdoch
Cc: r-devel; Michael Dewey
Subject: Re: [Rd] R CMD check tells
On Fri, Apr 16, 2010 at 5:51 PM, Thomas Lumley tlum...@u.washington.edu wrote:
On Fri, 16 Apr 2010, Simon Urbanek wrote:
On Apr 16, 2010, at 4:38 AM, Henrik Bengtsson wrote:
I think what people are also thinking about is that the policy for
publishing a package on CRAN is that it have
For a couple of days, MacOS X binaries are not build on CRAN (for my
recently uploaded packages only?):
The R.oo package is listed as MacOS X binary: not available, see
check log?, but the 'check log' show no errors
URL: http://cran.r-project.org/web/packages/R.oo/
Is this a known issue?
On Mon, Apr 12, 2010 at 5:08 PM, Duncan Murdoch murd...@stats.uwo.ca wrote:
On 12/04/2010 10:51 AM, Michael Dewey wrote:
When I run R CMD check on a package I have recently started work on I get
the following:
* checking R code for possible problems ... NOTE
addlinear: no visible binding
On Wed, Apr 7, 2010 at 6:13 PM, Seth Falcon s...@userprimary.net wrote:
On 4/7/10 1:09 AM, Christophe Genolini wrote:
Hi all,
I define a S4 class 'foo'. I define '[' and '[-' for it.
I do not want to export foo, so I do not put it in NAMESPACE.
I do not want to export '[' and '[-' either
Hi,
I found in a bit of code the following test for infinity:
if (x == Inf) ...
Is that valid, or should it be (as I always thought):
if (is.infinite(x)) ...?
Does it depend on whether 'x' is float or integer?
My question is related to testing for missing values where is.na(x) is
See rowMins(), rowMaxs() and rowRanges() in matrixStats (on CRAN).
The matrixStats package was created for the purpose of providing such
row*/col*() methods. First the functionality is provided, then the
methods are optimized for speed and memory, e.g. vectorizing,
implementing in native code,
On Mon, Mar 29, 2010 at 12:15 PM, cgeno...@u-paris10.fr wrote:
Getting back to the original poster who may have been forgotten in all
this, alternatives are switching to Linux and using R-Forge with that
(if such a switch in platforms is feasible) or using googlecode
(that's the largest
Christophe, if you want to solve your problem, please see if you first
can do it *without* ssh-keys. *Only* when that is working, worry
about the ssh keys. For detailed information on both cases, see by
Thread '[Rd] Setting up TortoiseSVN and PuTTY on Windows for
r-forge.r-project.org' on
Here are some notes/observations I've done on my setup that works for
me. Hopefully it will be added to some r-forge documentation/wiki.
I use:
Windows Vista Business SP2 32bit
TortoiseSVN 1.6.7 (Build 18415 - 32 Bit , 2010/01/22 17:55:06)
PuTTY v0.60 (with Pageant v0.60)
I have a deprecated
On Sat, Mar 27, 2010 at 3:12 PM, Christophe Genolini
cgeno...@u-paris10.fr wrote:
Hi the list,
I try to use R-Forge for developping a projet. I am using tortoise SVN (last
version) but I do not manage to Commit. I read the R-Forge user Manual and
some post on but I do not manage to find the
2010/3/27 hb h...@stat.berkeley.edu:
On Sat, Mar 27, 2010 at 3:12 PM, Christophe Genolini cgeno...@u-paris10.fr
wrote:
Hi the list,
I try to use R-Forge for developping a projet. I am using tortoise SVN (last
version) but I do not manage to Commit. I read the R-Forge user Manual and
some
2010/3/27 Christophe Genolini cgeno...@u-paris10.fr:
Henrik Bengtsson a écrit :
2010/3/27 hb h...@stat.berkeley.edu:
On Sat, Mar 27, 2010 at 3:12 PM, Christophe Genolini
cgeno...@u-paris10.fr wrote:
Hi the list,
I try to use R-Forge for developping a projet. I am using tortoise SVN
PM, Henrik Bengtsson h...@stat.berkeley.edu
wrote:
2010/3/27 Christophe Genolini cgeno...@u-paris10.fr:
Henrik Bengtsson a écrit :
2010/3/27 hb h...@stat.berkeley.edu:
On Sat, Mar 27, 2010 at 3:12 PM, Christophe Genolini
cgeno...@u-paris10.fr wrote:
Hi the list,
I try to use R-Forge
Hi.
On Mon, Mar 22, 2010 at 5:36 PM, Seth Falcon s...@userprimary.net wrote:
On 3/22/10 3:57 AM, Martin Maechler wrote:
SF == Seth Falcons...@userprimary.net
on Fri, 19 Mar 2010 13:47:17 -0700 writes:
SF On 3/17/10 9:11 AM, Henrik Bengtsson wrote:
Currently library
Hi,
from 'Writing R Extensions' [R version 2.11.0 Under development
(unstable) (2010-03-16 r51290)] one can read:
The optional `Imports' field lists packages whose name spaces are
imported from but which do not need to be attached. [...] Versions can
be specified, but will not be checked when
Currently help.search(.conflicts.OK) gives:
methods::.conflicts.OKAdditional (Support) Functions for Methods
However, help(.conflicts.OK, package=methods) provides no
information on the term .conflicts.OK.
Check the R-devel SVN source code, this is only because there is an:
Currently library() and attach() fail to locate an existing
'.conflicts.OK' in a package wit name space, unless it is exported.
Since there should be little interest in exporting '.conflicts.OK'
otherwise, one may argue that those methods should look for
'.conflicts.OK' even if it is not exported.
Thanks for the troubleshooting,
I just want to second this patch; it would be great if PATH_MAX could
be used everywhere.
In case someone else searches the archives later, but also for those
who don't know what this is about, PATH_MAX specifies the maximum
number of symbols allowed in a
My Wednesday procrastination:
There's quite some number of decimals in the SVG and some whitespace,
so some dummy trimming gives:
x - readLines(http://developer.r-project.org/Logo/Rlogo-1.svg;);
nx - sum(nchar(x))+length(x);
for (kk in 2:0) {
# Keep only K decimals
pattern -
FYI,
you're much more likely to get a response/see actions on this if you
report issues using the most recent stable version (R v2.10.1) and/or
even the developers version (R v2.11.0). You're current version is,
as you see, more than 2 years old. It is likely that the threshold to
compare the
Confirmed behavior on R version 2.10.1 Patched (2010-01-12 r50990) and
R version 2.11.0 Under development (unstable) (2010-02-14 r51138)
[Windows Vista]:
INTEGERS:
v - integer(5)
v
[1] 0 0 0 0 0
v[[2]] - integer(0)
v
[1] 0 2892960 0 0 0
v[[4]] - 1L[c()]
v
[1] 0
FYI/to the maintainers of r-forge:
R-forge seems to be down:
1. http://r-forge.r-project.org/ gives minimal page R-Forge Could Not
Connect to Database:.
2. svn+ssh://user name@svn.r-forge.r-project.org/ - svn requests
does not work.
3. ping svn.r-forge.r-project.org does indeed respond.
/Henrik
Hi,
I discovered a case where the code validation of R CMD check fails to
detect this issue. If a non-existing is defined/assigned in the same
function as a non-existing object is used, it passes unnoticed. For
example,
foo - function(...) {
nonExistingDummy1 - nonExistingDummy1(...);
Hi.
Here are some guidelines that I find useful:
- Avoid changing the arguments of generic functions provided by the
default R packages, especially the ones in base. Just, accept those
arguments. If there are extra arguments you don't like, you can
always add '...' to your method and they will
FYI,
a while ago I was looking into the problem with generic settings
files. I didn't find an omnibus/perfect solution, but have a look at
the Settings class in the R.utils package (R/Settings.R in the source
code). It tries to deal with automatic loading and saving of settings
(robust
, at 7:53 , Henrik Bengtsson wrote:
On Mon, Jan 18, 2010 at 1:36 AM, Prof Brian Ripley
rip...@stats.ox.ac.uk wrote:
Not an issue for *this* list!
I used this list to share this with package developers - not
particularly MacOS X users. As a package provider I'd like to know
when packages
FYI,
no MacOS X binaries have been built for CRAN since 2010-01-07:
url - http://cran.r-project.org/bin/macosx/universal/contrib/r-release/;;
x - readLines(url);
pattern - .*([0-9]{2}-[A-Za-z]{3}-[0-9]{4}) ([0-9]{2}:[0-9]{2}).*;
y - grep(pattern, x, value=TRUE);
y - grep(PACKAGE, y,
and you can always install from
the sources (in the vast majority of cases with no extra tools other than
Xcode).
On Sun, 17 Jan 2010, Henrik Bengtsson wrote:
FYI,
no MacOS X binaries have been built for CRAN since 2010-01-07:
url -
http://cran.r-project.org/bin/macosx/universal/contrib/r
Currently, system.file() on a non-existing package returns an empty string:
path - system.file(package=foo);
print(path);
[1]
The same goes for non-existing paths in existing package directories:
path - system.file(foo, package=base);
print(path);
[1]
Is there a rationale for this, or is it
in gtools. Also on http://gsubfn.googlecode.com see
mixsort example in the section starting ### more examples
On Tue, Jan 5, 2010 at 6:34 PM, Henrik Bengtsson h...@stat.berkeley.edu
wrote:
I know it is fairly easy to implement (though not always well
defined), but is there an existing sort
Thanks, and sorry - I missed those two missing letter ed and though
you only refer to that URL for extra example code. mixsort() does it
for me.
/H
On Thu, Jan 7, 2010 at 3:50 PM, Henrik Bengtsson h...@stat.berkeley.edu wrote:
Follow up/bug:
mixedsort() gets confused when there are periods
I know it is fairly easy to implement (though not always well
defined), but is there an existing sort function out there that takes
alphanum strings and sort them in a human fashion? For example,
instead of:
z1.doc z10.doc z100.doc z101.doc z11.doc z2.doc
it should out put:
z1.doc z2.doc
Should file.access(as.character(NA)) return -1 to be consisting with
non-existing files?
file.access(c(Non-existing-file, NA), mode=1)
Non-existing-file NA
-1 0
file.access(c(Non-existing-file, NA), mode=2)
Non-existing-file NA
I guess one problem is who is in charge of the name Rcpp on CRAN. For
instance, can I fork of yet another version of Rcpp (or any other
CRAN package) and submit it to CRAN? Can the original author submit a
completely different Rcpp package breaking all the additions made by
the new contributors?
Only for the record,
an unnecessary overhead when nothing is assigned:
x - integer(10)
str(x)
int [1:10] 0 0 0 0 0 0 0 0 0 0
x[c()] - 1.0;
str(x)
num [1:10] 0 0 0 0 0 0 0 0 0 0
'x' could equally well have renamed untouched.
/Henrik
__
Hi,
here is some discussion/information in the same vein:
(1) R-help thread '[R] The R fork', March 18, 2006:
https://stat.ethz.ch/pipermail/r-help/2006-March/101913.html
(2) R-devel thread '[Rd] New simpleExit() condition (Was: Re: Can
example() code stop the example without generating an
In order to clarify that getAnywhere(str) where str is a character
string object, will look for object with name str and not the value
of 'str', I suggest the following Rd updated for utils::getAnywhere():
Update the argument list:
\item{x}{a [literal] character string or name.}
The term
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