Thank you. I was confused because survival was a standard (recommended) package, so I thought r-bugs was the appropriate place. I have contacted the maintainer of the package with this information. My thanks also to Peter Dalgaard for de-base64-coding my message; I have no idea how or why it got encoded that way. Additionally, this was meant as a follow-up to PR#13171. Both PR#13171 and PR#13180 can be considered dealt with. Please accept my apologies for messing the process up so much.
-- Brian Diggs, Ph.D. Senior Research Associate, Department of Surgery, Oregon Health & Science University -----Original Message----- From: Prof Brian Ripley [mailto:[EMAIL PROTECTED] Sent: Monday, October 20, 2008 10:29 AM To: Peter Dalgaard Cc: Brian Diggs; [EMAIL PROTECTED]; [EMAIL PROTECTED] Subject: Re: [Rd] (PR#13180) Wrong behavior of lines.survfit for conf.int="only" Note that survival is a contributed package: only the maintainer can alter it (or at least, if someone else does the change will get lost -- it has happened before). So it is not useful to report on it on R-bugs (see the FAQ and the posting guide). On Mon, 20 Oct 2008, Peter Dalgaard wrote: > [EMAIL PROTECTED] wrote: >> SSBkb3dubG9hZGVkIHRoZSBzb3VyY2UgZm9yIHN1cnZpdmFsIGFuZCBJIHRoaW5rIEkgZm91bmQg >> dGhlIGJ1Zy4gIEkgaGF2ZSBub3QgdHJpZWQgdG8gYnVpbGQgdGhlIHBhY2thZ2Ugd2l0aCB0aGlz >> IGNoYW5nZSB0byB0ZXN0IGl0LCBidXQganVzdCBkZWZpbmluZyB0aGUgZnVuY3Rpb24gd2l0aCB0 >> aGlzIGNoYW5nZSBzZWVtcyB0byB3b3JrLg0KDQpUaGUgY29kZQ0KDQoJaWYgKGNvbmYuaW50PT0n >> b25seScpIHsNCgkgICAgY29uZi5pbnQgPC0gVFJVRQ0KCSAgICBwbG90LnN1cnY8LSBUUlVFDQoJ >> ICAgIH0NCg0KU2hvdWxkIGJlDQoNCglpZiAoY29uZi5pbnQ9PSdvbmx5Jykgew0KCSAgICBjb25m >> LmludCA8LSBUUlVFDQoJICAgIHBsb3Quc3VydjwtIEZBTFNFDQoJICAgIH0NCg0KLS1CcmlhbiBE >> aWdncw0KDQo= >> >> ______________________________________________ >> R-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-devel > > Argh! Jitterbug...must...die... > > [EMAIL PROTECTED] base64 -d > SSBkb3dubG9hZGVkIHRoZSBzb3VyY2UgZm9yIHN1cnZpdmFsIGFuZCBJIHRoaW5rIEkgZm91bmQg > .... > aWdncw0KDQo= > > I downloaded the source for survival and I think I found the bug. I have not > tried to build the package with this change to test it, but just defining the > function with this change seems to work. > > The code > > if (conf.int=='only') { > conf.int <- TRUE > plot.surv<- TRUE > } > > Should be > > if (conf.int=='only') { > conf.int <- TRUE > plot.surv<- FALSE > } > > --Brian Diggs > > > > > -- > O__ ---- Peter Dalgaard Øster Farimagsgade 5, Entr.B > c/ /'_ --- Dept. of Biostatistics PO Box 2099, 1014 Cph. K > (*) \(*) -- University of Copenhagen Denmark Ph: (+45) 35327918 > ~~~~~~~~~~ - ([EMAIL PROTECTED]) FAX: (+45) 35327907 > > ______________________________________________ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > -- Brian D. Ripley, [EMAIL PROTECTED] Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595 ______________________________________________ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
