Re: [Rd] filenames with special characters in the R/ directory of a package?

2010-02-12 Thread Barry Rowlingson
On Fri, Feb 12, 2010 at 5:35 AM, blue sky bluesky...@gmail.com wrote:
 According to R-exts.pdf (page 3):
 For maximal portability filenames should only
 contain only ASCII characters not excluded already (that is
 A-Za-z0-9._!#$%+,;=...@^(){}’[]

 I have some files with special characters like '[' and '%' e.g.
 '[.set.R'.

That character list in your extract from R-exts.pdf is a list of
non-special characters. And [ and % are in there.

 It's clarification of three sentences previous, which says:

the characters ‘’, ‘*’, ‘:’, ‘/’, ‘’, ‘’, ‘?’, ‘\’, and ‘|’ are
not allowed in file names

 I also have some functions that also have those special
 characters defined in those files exported in NAMESPACE.

 I use the following command to install. And I get no warning or errors.

 R CMD INSTALL -d -l my_custom_dir my.pkg

 I then load the package. I get the following errors and warnings. I
 changed a file to one without these special characters. Then the
 corresponding warning/error disappears. Is it the case that there
 should never be files with special characters as names?

 library(my.pkg)
 Error in namespaceExport(ns, exports) :
  undefined exports: %is%
 In addition: Warning message:
 S3 methods ‘[.set’ were declared in NAMESPACE but not found
 Error: package/namespace load failed for 'my.pkg'

 Have you done an R CMD check on your package? I suspect a problem in
your NAMESPACE file, but it's not related to special characters.

Barry

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Re: [Rd] filenames with special characters in the R/ directory of a package?

2010-02-12 Thread Prof Brian Ripley
'Writing R Extensions' does say what names are allowed in the R 
directory (at the start of section 1.1.3 in section-numbered formats). 
To wit


  The R subdirectory contains R code files, only. The code files to be
  installed must start with an ASCII (lower or upper case) letter or
  digit and have one of the extensions .R, .S, .q, .r, or .s.

'[.set.R' does not meet that rule, and so is skipped.  This is not 
something R CMD check reports, since the wording implies that other 
names can be used for files to be not installed.



On Fri, 12 Feb 2010, Barry Rowlingson wrote:


On Fri, Feb 12, 2010 at 5:35 AM, blue sky bluesky...@gmail.com wrote:

According to R-exts.pdf (page 3):
For maximal portability filenames should only
contain only ASCII characters not excluded already (that is
A-Za-z0-9._!#$%+,;=...@^(){}’[]

I have some files with special characters like '[' and '%' e.g.
'[.set.R'.


That character list in your extract from R-exts.pdf is a list of
non-special characters. And [ and % are in there.

It's clarification of three sentences previous, which says:

the characters ‘’, ‘*’, ‘:’, ‘/’, ‘’, ‘’, ‘?’, ‘\’, and ‘|’ are
not allowed in file names


I also have some functions that also have those special
characters defined in those files exported in NAMESPACE.

I use the following command to install. And I get no warning or errors.

R CMD INSTALL -d -l my_custom_dir my.pkg

I then load the package. I get the following errors and warnings. I
changed a file to one without these special characters. Then the
corresponding warning/error disappears. Is it the case that there
should never be files with special characters as names?


library(my.pkg)

Error in namespaceExport(ns, exports) :
 undefined exports: %is%
In addition: Warning message:
S3 methods ‘[.set’ were declared in NAMESPACE but not found
Error: package/namespace load failed for 'my.pkg'


Have you done an R CMD check on your package? I suspect a problem in
your NAMESPACE file, but it's not related to special characters.

Barry

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--
Brian D. Ripley,  rip...@stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel:  +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UKFax:  +44 1865 272595__
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Re: [Rd] filenames with special characters in the R/ directory of a package?

2010-02-12 Thread blue sky
It is strange to me why the filename must start with a letter or
digit, while the following characters can be something like '['. Is
there a reason why it is designed in this way? So that I can
understand the design principle rather than memorizing the facts
derived from the principle.

On Fri, Feb 12, 2010 at 5:10 AM, Prof Brian Ripley
rip...@stats.ox.ac.uk wrote:
 'Writing R Extensions' does say what names are allowed in the R directory
 (at the start of section 1.1.3 in section-numbered formats). To wit

  The R subdirectory contains R code files, only. The code files to be
  installed must start with an ASCII (lower or upper case) letter or
  digit and have one of the extensions .R, .S, .q, .r, or .s.

 '[.set.R' does not meet that rule, and so is skipped.  This is not something
 R CMD check reports, since the wording implies that other names can be used
 for files to be not installed.


 On Fri, 12 Feb 2010, Barry Rowlingson wrote:

 On Fri, Feb 12, 2010 at 5:35 AM, blue sky bluesky...@gmail.com wrote:

 According to R-exts.pdf (page 3):
 For maximal portability filenames should only
 contain only ASCII characters not excluded already (that is
 A-Za-z0-9._!#$%+,;=...@^(){}’[]

 I have some files with special characters like '[' and '%' e.g.
 '[.set.R'.

 That character list in your extract from R-exts.pdf is a list of
 non-special characters. And [ and % are in there.

 It's clarification of three sentences previous, which says:

 the characters ‘’, ‘*’, ‘:’, ‘/’, ‘’, ‘’, ‘?’, ‘\’, and ‘|’ are
 not allowed in file names

 I also have some functions that also have those special
 characters defined in those files exported in NAMESPACE.

 I use the following command to install. And I get no warning or errors.

 R CMD INSTALL -d -l my_custom_dir my.pkg

 I then load the package. I get the following errors and warnings. I
 changed a file to one without these special characters. Then the
 corresponding warning/error disappears. Is it the case that there
 should never be files with special characters as names?

 library(my.pkg)

 Error in namespaceExport(ns, exports) :
  undefined exports: %is%
 In addition: Warning message:
 S3 methods ‘[.set’ were declared in NAMESPACE but not found
 Error: package/namespace load failed for 'my.pkg'

 Have you done an R CMD check on your package? I suspect a problem in
 your NAMESPACE file, but it's not related to special characters.

 Barry

 __
 R-devel@r-project.org mailing list
 https://stat.ethz.ch/mailman/listinfo/r-devel


 --
 Brian D. Ripley,                  rip...@stats.ox.ac.uk
 Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
 University of Oxford,             Tel:  +44 1865 272861 (self)
 1 South Parks Road,                     +44 1865 272866 (PA)
 Oxford OX1 3TG, UK                Fax:  +44 1865 272595

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[Rd] filenames with special characters in the R/ directory of a package?

2010-02-11 Thread blue sky
According to R-exts.pdf (page 3):
For maximal portability filenames should only
contain only ASCII characters not excluded already (that is
A-Za-z0-9._!#$%+,;=...@^(){}’[]

I have some files with special characters like '[' and '%' e.g.
'[.set.R'. I also have some functions that also have those special
characters defined in those files exported in NAMESPACE.

I use the following command to install. And I get no warning or errors.

R CMD INSTALL -d -l my_custom_dir my.pkg

I then load the package. I get the following errors and warnings. I
changed a file to one without these special characters. Then the
corresponding warning/error disappears. Is it the case that there
should never be files with special characters as names?

 library(my.pkg)
Error in namespaceExport(ns, exports) :
 undefined exports: %is%
In addition: Warning message:
S3 methods ‘[.set’ were declared in NAMESPACE but not found
Error: package/namespace load failed for 'my.pkg'

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