On Wed, Jun 6, 2012 at 8:21 AM, Michael Friendly frien...@yorku.ca wrote:
[Env: Win Xp / StatET 2.0 / R 2.15.0]
In my heplots package I extended the HE-examples.Rnw vignette under
inst/doc. The package passes R CMD check
on my machine:
* using log directory 'C:/eclipse-3.7/heplots.Rcheck'
* using R version 2.15.0 (2012-03-30)
* using platform: i386-pc-mingw32 (32-bit)
...
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ...
'HE-examples.Rnw' ... OK
'repeated.Rnw' ... OK
...
2 suggestions.
First, On your own workstation, run the cmd check like so
R CMD check --as-cran package.tar.gz
That will give you results more like CRAN or Rforge.
Second, how did your pdf get into the folder fig? It makes me
suspect you are using some forbidden Sweave settings.
Oh, Third, here's a suggestion. Build your own vignette, copy from
vignettes to inst/doc, and then in the DESCRIPTION file include the
option to ask the R system not to rebuild your vignette.
BuildVignettes: false
I think you will see this discussed/debated in R-devel and the
situation is somewhat fluid.
pj
However, on R-Forge and on CRAN, the following error/warning is generated:
Mon Jun 4 20:18:22 2012: Checking package heplots (SVN revision 136) ...
* using log directory
‘/mnt/building/build_2012-06-04-20-02/RF_PKG_CHECK/PKGS/heplots.Rcheck’
* using R version 2.15.0 Patched (2012-06-03 r59505)
* using platform: x86_64-unknown-linux-gnu (64-bit)
...
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
‘HE-examples.Rnw’ ... [4s/4s] OK
‘repeated.Rnw’ ... [4s/4s] OK
[9s/9s] OK
* checking re-building of vignette PDFs ... NOTE
Error in re-building vignettes:
...
Loading required package: car
Loading required package: MASS
Loading required package: nnet
Error: processing vignette 'HE-examples.Rnw' failed with diagnostics:
cannot open file 'fig/plot-plastic1.pdf'
Execution halted
* checking PDF version of manual ... OK
I am unable to determine why the file fig/plot-plastic1.pdf cannot be
opened. It is in my inst/doc/fig directory is regenerated
by the .Rnw file. What could cause this?
Second, I have tried manually running tools::compactPDF(HE-examples.pdf) on
the .pdf file under inst/doc in the package,
but no change is made to the .pdf file. I can't see any way to correct this.
--
Michael Friendly Email: friendly AT yorku DOT ca
Professor, Psychology Dept.
York University Voice: 416 736-5115 x66249 Fax: 416 736-5814
4700 Keele Street Web: http://www.datavis.ca
Toronto, ONT M3J 1P3 CANADA
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--
Paul E. Johnson
Professor, Political Science Assoc. Director
1541 Lilac Lane, Room 504 Center for Research Methods
University of Kansas University of Kansas
http://pj.freefaculty.org http://quant.ku.edu
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