Re: [Rd] Problem with a regular expression.

2017-08-17 Thread Rui Barradas
Hello, This seems to be serious. RGui.exe, fresh session. I've clicked File > New Script and wrote Oldterm <- c("A", "B", "A", "*", "B") strsplit(Oldterm, ")" ) Ran each instruction at a time with Ctrl+r and with the strsplit call the system froze. Ctrl+Alt+Del didn't work, I had to go

Re: [Rd] Problem with a regular expression.

2017-08-17 Thread Moshe Olshansky via R-devel
I tried this on a Linux (Ubuntu) server invoking R from the command line and the result was the same, except that I could kill the R session from another terminal window. From: Rui Barradas To: Chris Triggs ; "r-devel@r-project.org"

Re: [Rd] Problem with a regular expression.

2017-08-17 Thread Tomas Kalibera
The problem is in TRE library, in regcomp, while compiling the regular expression. This is enough to trigger in R (to do this without re-boot: ulimit -v 50 ): > strsplit("", ")") To repeat in TRE, one can build TRE from sources and run > ./src/agrep ")" README.md Tomas On

Re: [Rd] strange behaviour read.table and clipboard

2017-08-17 Thread PIKAL Petr
Hi > -Original Message- > From: Robert Baer [mailto:rb...@atsu.edu] > Sent: Wednesday, August 16, 2017 3:04 PM > To: PIKAL Petr ; Duncan Murdoch > > Cc: r-devel@r-project.org > Subject: Re: [Rd] strange behaviour read.table and clipboard

Re: [Rd] strange behaviour read.table and clipboard

2017-08-17 Thread Tomas Kalibera
Thank you for the report, it is a bug in buffering in R (not specific to Windows) and will be fixed. Best Tomas On 08/17/2017 10:37 AM, PIKAL Petr wrote: Hi -Original Message- From: Robert Baer [mailto:rb...@atsu.edu] Sent: Wednesday, August 16, 2017 3:04 PM To: PIKAL Petr

[Rd] Problem with a regular expression.

2017-08-17 Thread Wollschlaeger, Daniel
The issue seems related to R bug report 15012: https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=15012 As mentioned in the comments there, a pull request to the TRE library has recently been made, but I don't know about its status. Daniel Von:

[Bioc-devel] SVN date stamping on vignette's does not work anymore.

2017-08-17 Thread Turaga, Nitesh
Hi Maintainers, You have been using SVN properties to stamp dates in your vignettes. Since the git transition, this does not work anymore. These packages have been identified in this GitHub issue (https://github.com/Bioconductor/bioc_git_transition/issues/32). Best, Nitesh This email

[Bioc-devel] Generate valid SSH keys for the bioc-git server!

2017-08-17 Thread Turaga, Nitesh
Hi Maintainers, Some of you have submitted keys which look like this, ```3d:9a:10:86:19:3d:ac:b4:a1:fe:c2:a9:8c:28:55:49``` ##wrong, this is a SSH key fingerprint. This is NOT an ssh key. A valid ssh key looks like, ``` ssh-rsa

[Bioc-devel] Bioconductor-mirror permanently removed August 25th

2017-08-17 Thread Turaga, Nitesh
Hi Maintainers, The https://github.com/Bioconductor-mirror is now stale after Bioconductor’s git transition. We are no longer going to support it, and will be taking it offline permanently on August 25th (next Friday). If you have “forked” a repository from the Bioconductor-mirror, you will be