On Thu, 2007-11-22 at 16:16 +0500, Shoaaib Mehmood wrote:
hi,
is there a way of calculating of measuring dependence between two
categorical variables. i tried using the chi square test to test for
independence but i got error saying that the lengths of the two
vectors don't match. Suppose
amna khan wrote:
Dear Sir
When I close R console then following message apear when I want to save the
workspace. If I close the R console without saving workspace then R console
is closed otherwise not.
Error in gzfile(file, wb) : unable to open connection
In addition: Warning message:
Xin Huang wrote:
Hi,
I wrote my own R program doing some MCMC simulation but I often got
Runtime Error even the program only run for a couple of hundred
times. The detail error message is as following:
Runtime Error!
Program: C:\Program Files\R\R-2.5.1\bin\Rgui.exe
This application
Denver,
data is a matrix like this
AMR BS GE HR MO UK SP500
1974 -0.3505 -0.1154 -0.4246 -0.2107 -0.0758 0.2331 -0.2647
1975 0.7083 0.2472 0.3719 0.2227 0.0213 0.3569 0.3720
1976 0.7329 0.3665 0.2550 0.5815 0.1276 0.0781 0.2384
1977
Daniel Berner daniel.berner at mail.mcgill.ca writes:
It would be great to know if and where an R code for Common Principal
Component Analysis is available.
The only code I know is in IMSL Fortran library, and that is proprietary, and
that is expensive. After a quick look, it really appears
Hi
Thank you very much for you interest and help in this mysterious problem.
I am going to investigate the random numbers issue. Concerning the
order.maxit helps but it is not what I have in mind. I think that in
case
order.max - if (is.null(order.max)) floor(10 * log10(n.))
Hello
I'm very much a beginner on meta-analysis, so apologies if this is a
trivial posting. I've been sent a set data from separate experimental
studies, Treatment and Control, but no measure of the variance of effect
sizes, numbers of replicates etc. Instead, for each study, all I have
is the
On Saturday 24 November 2007, Paul Smith wrote:
Dear All,
Can R produce dot plots like the one of the following picture:
http://en.wikipedia.org/wiki/Image:Dotplot_of_random_values.png
?
I have tried dotchart, but no success.
I'm coming late to this thread, but I believe what Paul wants is
CCordeiro wrote:
Hi
Thank you very much for you interest and help in this mysterious
problem.
I am going to investigate the random numbers issue. Concerning the
order.maxit helps but it is not what I have in mind. I think that in
case
Dear Clara,
this did actually get
Jari Oksanen wrote:
Daniel Berner daniel.berner at mail.mcgill.ca writes:
It would be great to know if and where an R code for Common Principal
Component Analysis is available.
The only code I know is in IMSL Fortran library, and that is proprietary,
and
that is expensive. After a
Dear Everyone in list:
I am writing some codes to automate the process of
fitting linear models where the names of variables of
models are produced and stored in character vectors.
But I have problems to pass the vectors to the lm( )
because I don't know how to strip the quotation marks
Here are the codes of the example of lm( ):
## Annette Dobson (1990) An Introduction to
Generalized Linear Models.
## Page 9: Plant Weight Data.
ctl -
(4.17,5.58,5.18,6.11,4.50,4.61,5.17,4.53,5.33,5.14)
trt -
(4.81,4.17,4.41,3.59,5.87,3.83,6.03,4.89,4.32,4.69)
group - gl(2,10,20,
prettyR
--- Shoaaib Mehmood [EMAIL PROTECTED] wrote:
i cant find help for xtab. Which package contains
this function
On Nov 24, 2007 12:16 PM, G Ilhamto
[EMAIL PROTECTED] wrote:
hi shohaib,
have you tried xtab instead of chisq.test?
Ilham
On Nov 22, 2007 6:16 AM, Shoaaib
Hi All,
I would like to output the results of a function into a text file,
legible as a such. The function produces a summary quite like:
summary(lm(x ~ y + w * z))
[for instance]
and I am not clear how to save this summary into a text file
'automagically', because I need to be able to do
Dear list,
I am starting a new project in cmdscale, and I have a question regarding
distance matrix and covariance matrix.
Can I use covariance as my distance matrix?
Any good reference in this matter?
Thank you,
ilham
[[alternative HTML version deleted]]
Would something like this do it?
sink(file=reg.txt)
summary(reg)
sink()
--- Federico Calboli [EMAIL PROTECTED] wrote:
Hi All,
I would like to output the results of a function
into a text file,
legible as a such. The function produces a summary
quite like:
summary(lm(x ~ y + w * z))
I've rolled up R-2.6.1.tar.gz a short while ago.
This is a maintenance release and fixes a number of mostly minor bugs
and platform issues, as well as a couple of major problems.
Probably, the most important issues were
- save-to-postscript on Windows
- tcltk event loop with X11
- build issue on
?capture.output
On Nov 26, 2007 9:31 AM, Federico Calboli [EMAIL PROTECTED] wrote:
Hi All,
I would like to output the results of a function into a text file,
legible as a such. The function produces a summary quite like:
summary(lm(x ~ y + w * z))
[for instance]
and I am not clear how
I would like to output the results of a function into a text file,
legible as a such. The function produces a summary quite like:
summary(lm(x ~ y + w * z))
You can either redirect output to a file using cat or sink; generate a
latex table using xtable (in the xtable package); or export
The pcaMethods package offers a collection of different algorithms for
PCA, some of which (NIPALS and others) can be used on data that have
missing values.
Kevin Wright
On Nov 24, 2007 4:59 PM, Hartmut Oldenbürger [EMAIL PROTECTED] wrote:
Hi Birgit, and All
Possibly you should not consider
Hi Spencer,
The default tolerance in your function might be a bit too conservative (i.e.
too small). Here is an example:
set.seed(123)
z - polyroot(sample(1:5, size=40, rep=T)) # polynomial of degree 39
zmat - which(outer(z, z, FUN=is.conj), arr.ind=T)
zmat[zmat[,1] zmat[,2], ]
row
Also, this works:
s - summary(iris)
capture.output(s, file = myfile.txt)
and the Hmisc and xtable packages can output it in latex:
library(xtable)
print(xtable(s), file = myfile.tex)
library(Hmisc)
latex(s, file= myfile.tex)
On Nov 26, 2007 9:59 AM, John Kane [EMAIL PROTECTED] wrote:
Would
Dear R-users,
I'm posting a problem I already asked help for some time ago, because I'm
facing that problem once again and even because now, reading that old
e-mail, and the answer recevied, I understand I've not made myself clear.
Here's the question: I need to create an empty list of a specific
Federico Calboli [EMAIL PROTECTED] wrote:
I would like to output the results of a function into a text file,
legible as a such. The function produces a summary quite like:
Take a look at the sink() function. Does that do what you need?
--
Mike Prager, NOAA, Beaufort, NC
* Opinions
hadley wickham [EMAIL PROTECTED] wrote:
Which moves somewhat back towards my original suggestion of review
articles. To me, an article which compared and contrasted four or
five packages on a given topic would be much more useful than an
article which reviewed only a single package. I think
Hello!
I posted earlier - about my problems with R 2.6 crashing (i.e.,
telling me it needs to shut down) every time I tried to open an R
script. First, it looked like it was unhappy with my working outside
of R folder (under Program Files). But not it looks like it was not
really the problem.
Now,
On Mon, 2007-11-26 at 14:17 +, [EMAIL PROTECTED] wrote:
Here are the codes of the example of lm( ):
## Annette Dobson (1990) An Introduction to
Generalized Linear Models.
## Page 9: Plant Weight Data.
ctl -
(4.17,5.58,5.18,6.11,4.50,4.61,5.17,4.53,5.33,5.14)
trt -
On 11/26/2007 11:03 AM, Dimitri Liakhovitski wrote:
Hello!
I posted earlier - about my problems with R 2.6 crashing (i.e.,
telling me it needs to shut down) every time I tried to open an R
script. First, it looked like it was unhappy with my working outside
of R folder (under Program Files).
I've downloaded R-2.6.0 I want to install it on Solaris, so, I run the
configure command, it to be fine, but once I run
make it give me the following error:
*ld: fatal : fichier Rmain.o : type de machine ELF erronV : EM_386
ld: fatal : Erreurs dans le traitement des fichiers. Aucun rVsultat n'a
Dear Sir
I was facing various problems especially in making graphs. No graph file was
displayed. I reinstall the R 2.6.0. During installation all files icon is
inactive. It has not been marked. Which is creating many problems
particularly grDevices are not responding.
How to solve this problem
On Mon, 26 Nov 2007, aziza belmaati wrote:
I've downloaded R-2.6.0 I want to install it on Solaris, so, I run the
configure command, it to be fine, but once I run
make it give me the following error:
*ld: fatal : fichier Rmain.o : type de machine ELF erronV : EM_386
ld: fatal : Erreurs
My question is a seemingly simple one. I have a bunch of user-defined
functions which compute such-and-such objects. I want to be able to define a
variable in a particular function, then make use of it later, perhaps in a
different function, without necessarily having to move it around in
aziza belmaati wrote:
I've downloaded R-2.6.0 I want to install it on Solaris, so, I run the
configure command, it to be fine, but once I run
make it give me the following error:
*ld: fatal : fichier Rmain.o : type de machine ELF erronV : EM_386
ld: fatal : Erreurs dans le traitement des
Dieter Menne wrote:
Dear List, possibly called Frank,
I tried to create an ftable lookalike of the following data set in
LaTeX/Sweave
with summary(formula,..), but I could not get it to work for count tables;
numeric tables work fine.
summary(formula,...,fun=table) does not give the
On Mon, Nov 26, 2007 at 04:35:53PM +0100, Niccolò Bassani wrote:
Dear R-users,
I'm posting a problem I already asked help for some time ago, because I'm
facing that problem once again and even because now, reading that old
e-mail, and the answer recevied, I understand I've not made myself
Spencer,
I just observed that the polynomial root calculation in the package,
polynom, using the function solve() is more accurate than the polyroot()
function in the base package. Here is an example:
set.seed(1234)
p - polynomial(sample(1:10, size=45, rep=T)) # degree 44
z - solve(p)
Hi there,
I am looking for R-packages that can help me visualize properties on
nucleotide sequences. I want to display sequences in the 1-100K base range
as lines and plot features above and below those lines.
Any ideas would be welcome.
Thanks,
Bernd
[[alternative
On Mon, 2007-11-26 at 09:25 -0800, Bricklemyer, Ross S wrote:
All,
I have been using a data set to build pls models for three different
soil properties. Two of the three models run fine; however I receive
the following error for the final model.
libs.IC.cal - mvr(libs.IC.fmla, data =
Thomas L Jones wrote:
My question is a seemingly simple one. I have a bunch of user-
defined functions which compute such-and-such objects. I want to be
able to define a variable in a particular function, then make use of
it later, perhaps in a different function, without necessarily
On 11/26/2007 1:25 PM, Alberto Monteiro wrote:
Thomas L Jones wrote:
My question is a seemingly simple one. I have a bunch of user-
defined functions which compute such-and-such objects. I want to be
able to define a variable in a particular function, then make use of
it later, perhaps in
Hi there,
I am looking for R-packages that can help me visualize properties on
nucleotide sequences. I want to display sequences in the 1-100K base range
as lines and plot features above and below those lines.
Any ideas would be welcome.
Thanks,
Bernd
Dieter Menne wrote:
I tried to create an ftable lookalike of the following data set in
LaTeX/Sweave
with summary(formula,..), but I could not get it to work for count tables;
numeric tables work fine.
summary(formula,...,fun=table) does not give the full cross breakdown.
Frank E
Duncan Murdoch wrote:
R doesn't really have global variables. - goes looking in parent
environments until it finds the target variable, and makes the
assignment there. If it never finds one, it makes the assignment in
the global environment, but the name is misleading: it should
Dear colleagues,
I'm an epidemiologist with no background in programming and just
started using R a few weeks ago. I am working on the epidemiology of
African sleeping sickness, and am trying to use R to perform a Monte
Carlo Markov Chain analysis to estimate three unknown parameters within
a
Hi everyone,
I need help in writing a statistical function for bootstrap. Suppose m is a
matrix with n cols and p rows, my original data. What I want to do is a
bootstrap (using boot from package boot) on eigenvectors from a PCA done on m
with a statistic function calculating the eigenvector
On Wed, 14 Nov 2007, Manal Helal wrote:
Dimn Waves Tot. Parts In Wave Wave NoSerial Index W Order
M
Index DepTot. D1-Serial D1-IndexD1-OrderD1-M
Index D2-Serial D2-IndexD2-OrderD2-M Index
2 7 1 0 1
I have a series of numbers I'm wanting to plot. They come from a
nanodrop machine, which graphs with a specific x and y indices. X goes
from 220nm to 350nm, which I can set. But the y axis should go from -5
to 65, but I'm finding it impossible to hardcode that.
I've looked. I've typed ?plot at
Hi Amy,
Many (perhaps most) of the people on the list do not receive emails with
html...so we can't see colored text. Also it would be helpfully to have
a bit of your data, so we can run your code (see the posting guide in
this regard,http://www.R-project.org/posting-guide.html).
Please
As an alternative you could try quantile regression (find a regression
line for the 95th percentile), if the relationship between max(y) and x
is only due to more points (and therefore more oportunities for large
values) then the estimated quantile lines should not differ
significantly from 0.
On Monday 26 November 2007, Dave Jacoby wrote:
I have a series of numbers I'm wanting to plot. They come from a
nanodrop machine, which graphs with a specific x and y indices. X goes
from 220nm to 350nm, which I can set. But the y axis should go from -5
to 65, but I'm finding it impossible to
Dear R-List,
I am using Tobit regression models to estimate censored dependent
variables (using survreg in the survival package). I have 2 questions:
1) Is there any package providing specification tests for Tobit models
(Hausman test proposed by Newey (1987), Journal of Econometrics, White
Dear All,
Suppose that you have the following data:
X Frequency
1 3
4 2
3 4
To get a vector with all observations, one could use
data - c(rep(1,3),rep(4,2),rep(3,4))
I am wondering whether there exists an easier way of doing this. Any ideas?
Thanks in advance,
Paul
Hi everyone, I'm trying to understand some R output here for ordinal
regression. I have some integer data called A split up into 3 ordinal
categories, top, middle and bottom, T, M and B respectively.
I have to explain this output to people who have a very poor idea about
statistics and just
On 2007-11-23, hadley wickham [EMAIL PROTECTED] wrote:
What I need is a reference to the tests implemented in glht, so I can
decide which one is appropriate for my data. Sequen, Changepoint et
al. may be common terms in some fields, but not in the references I'm
working from.
Have you read
x - c(1,4,3)
freq - c(3,2,4)
rep(x, freq)
[1] 1 1 1 4 4 3 3 3 3
Gabor
On Mon, Nov 26, 2007 at 07:34:36PM +, Paul Smith wrote:
Dear All,
Suppose that you have the following data:
X Frequency
1 3
4 2
3 4
To get a vector with all observations, one could use
On Nov 26, 2007 7:45 PM, Gabor Csardi [EMAIL PROTECTED] wrote:
x - c(1,4,3)
freq - c(3,2,4)
rep(x, freq)
[1] 1 1 1 4 4 3 3 3 3
Thanks, Gabor. I had just tried
rep(1:10,10:20)
but should have tried
rep(1:10,11:20)
Paul
On Mon, Nov 26, 2007 at 07:34:36PM +, Paul Smith wrote:
My mistake, by xlabel and ylabel you are refering to the row and column
names of your matrix, right? To label a matrix you can simply use
colnames() and rownames().
Still its not clear to me what you are trying to do with your code.
Perhaps if you give us a sample of your data and explain
You could try something like this (untested).
lapply(unique(elio2$id), function(i){
sub.mu - exp.mu[exp.mu$id==i, ]
n - nrow(sub.mu)
D - matrix(0, n, n)
diag(D) - sub.mu$deriv.link
A - mat.cov[seq_len(n), seq_len(n)]
R - corstr[seq_len(n), seq_len(n)]
SolveD - solve(D)
SolveA -
One additionnal question about a problem that I just noticed in my script:
the list created by my split function is sorted in the increasing order
and not in the current order of the elements of the do.call argument
(see the results of the two last lines of the following script). I was
Hi,
I am having trouble with a large dataset I am importing from SPSS.
The problem is I have to merge two datasets (which seems to be
working OK) then select rows based on attributes. I have a column
with either blank cells, B or E entered. I want to select all rows
with E. I have other
Roy Sanderson a écrit :
Hello
I'm very much a beginner on meta-analysis, so apologies if this is a
trivial posting. I've been sent a set data from separate experimental
studies, Treatment and Control, but no measure of the variance of effect
sizes, numbers of replicates etc. Instead, for
Gavin Simpson a écrit :
On Mon, 2007-11-26 at 14:17 +, [EMAIL PROTECTED] wrote:
Here are the codes of the example of lm( ):
## Annette Dobson (1990) An Introduction to
Generalized Linear Models.
## Page 9: Plant Weight Data.
ctl -
(4.17,5.58,5.18,6.11,4.50,4.61,5.17,4.53,5.33,5.14)
Hmm - I looked for the codetools package on the UK(London) cran site and
couldn't find it - where can I find it please?
Martin
[EMAIL PROTECTED] wrote:
library(codetools)
findGlobals(power)
Thanks for your answer.
In addition, findGlobals(power,FALSE) gives the list of the globals
Hello,
I want to calculate Odds Ratio.
I have a binary outcome and two groups of exposure: '1' are exposed, and
'2' are not-exposed.
I want '2' to be the reference group.
By factor I get group '1' as a reference because it sorted in increasing
order.
How do I change it?
Thank you,
Sigalit.
Try some other mirror, or the main site:
http://cran.r-project.org/src/contrib/Descriptions/codetools.html
You can easily install it via
install.packages(codetools)
and then selecting an appropriate mirror.
Gabor
On Mon, Nov 26, 2007 at 08:19:39PM +, Martin Waller wrote:
Hmm - I looked
one way is the following:
vals - do.call(paste, c(mydata[1:2], sep = :))
fc - factor(vals, levels = unique(vals))
mydata.split - split(mydata, fc, drop = TRUE)
names(mydata.split)
I hope it helps.
Best,
Dimitris
Dimitris Rizopoulos
Ph.D. Student
Biostatistical Centre
School of Public
On Mon, 26 Nov 2007, Max wrote:
Hi everyone, I'm trying to understand some R output here for ordinal
regression. I have some integer data called A split up into 3 ordinal
categories, top, middle and bottom, T, M and B respectively.
I have to explain this output to people who have a very poor
It is part of recent versions of R (a recommended package), so if Mr
Waller follows the advice of the posting guide, he will find it already
installed.
On Mon, 26 Nov 2007, Gabor Csardi wrote:
Try some other mirror, or the main site:
You can use the reshape package:
x - read.table(textConnection(Samp MCI PCT
+ 11 2
+ 1 4 5
+ 1 7 8
+ 2 4 4
+ 2
On 11/26/2007 1:46 PM, Alberto Monteiro wrote:
Duncan Murdoch wrote:
R doesn't really have global variables. - goes looking in parent
environments until it finds the target variable, and makes the
assignment there. If it never finds one, it makes the assignment in
the global
Hello,
I am very new to R and Time Series. I need some help including R codes
about the following issues. I' ll really appreciate any number of
answers...
# I have a time series data composed of 24 values:
myinput = c(n1,n2...,n24);
# In order to make a forecasting a, I use the following codes
sigalit mangut-leiba wrote:
Hello,
I want to calculate Odds Ratio.
I have a binary outcome and two groups of exposure: '1' are exposed, and
'2' are not-exposed.
I want '2' to be the reference group.
By factor I get group '1' as a reference because it sorted in increasing
order.
How do I
hadley wrote:
On 11/23/07, thegeologician [EMAIL PROTECTED] wrote:
I'd like to produce a series of maps with different data on, but exactly
the
same extent in each plot. Is there a way of switching the automatic
extent
(to the data of the last layer added) OFF? I'm trying something
The hpd function in the TeachingDemos package does this computation (for
unimodal densities).
--
Gregory (Greg) L. Snow Ph.D.
Statistical Data Center
Intermountain Healthcare
[EMAIL PROTECTED]
(801) 408-8111
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On
With 24 values you are asking the impossible from your data. If you
use the standard Box Jenkins approach rather than an automatic ARIMA
and using any prior knowledge of the data you might manage some form
of forecast. Look at graphs of the data and their first differences.
Look at graphs of
Ozcan Asilkan wrote:
Hello,
I am very new to R and Time Series. I need some help including R codes
about the following issues. I' ll really appreciate any number of
answers...
# I have a time series data composed of 24 values:
myinput = c(n1,n2...,n24);
# In order to make a
It worked. The web page must have been down when I tried it the other day.
Thank you, Becky
On 11/26/07, Jonathan Baron [EMAIL PROTECTED] wrote:
Try http://popgen.unimaas.nl/~jlindsey/rcode.html
On 11/25/07 10:41, Becky Parker wrote:
Hello -
I cannot get to
?subset
subset(data, column == E)
On Nov 26, 2007 3:07 PM, Katherine Jones [EMAIL PROTECTED] wrote:
Hi,
I am having trouble with a large dataset I am importing from SPSS.
The problem is I have to merge two datasets (which seems to be
working OK) then select rows based on attributes. I have
I was able to get the repeated library from
http://popgen.unimaas.nl/~jlindsey/rcode.htmlhttp://popgen.unimaas.nl/%7Ejlindsey/rcode.html
I still have not been able to find the repeated library on CRAN. It is not
listed on http://cran.r-project.org/src/contrib/PACKAGES.html
I also tried clicking
This sort of works. It does select the E data, but unfortunately it
doesn't select the data from the other columns; I want to select data
across about 5 columns by the factor E in one of the columns. It
should be easy, but for some reason it is not working. The spaces
being added don't
On Mon, 26 Nov 2007, Becky Parker wrote:
I was able to get the repeated library from
http://popgen.unimaas.nl/~jlindsey/rcode.htmlhttp://popgen.unimaas.nl/%7Ejlindsey/rcode.html
I still have not been able to find the repeated library on CRAN. It is not
listed on
That should give you back a subset of 'data' (with all its columns),
for those with E in 'column'. Can you show an example of your data
and what the desired output would be. The posting guide asks provide
commented, minimal, self-contained, reproducible code so we don't
have to speculate on
Hi all,
I'm fairly new to R, so I'm still trying to feel out what is available to
me. I would like to be able to plot joint density in a two dimensional plot
where density is indicated by color or darkness gradients, like a 2d color
coded topographic map. Ideally, the output would be something
Prof Brian Ripley explained :
On Mon, 26 Nov 2007, Max wrote:
Hi everyone, I'm trying to understand some R output here for ordinal
regression. I have some integer data called A split up into 3 ordinal
categories, top, middle and bottom, T, M and B respectively.
I have to explain this
Look at levelplot in the lattice package.
On Nov 26, 2007 5:19 PM, Josef Fruehwald [EMAIL PROTECTED] wrote:
Hi all,
I'm fairly new to R, so I'm still trying to feel out what is available to
me. I would like to be able to plot joint density in a two dimensional plot
where density is
Global variables are strongly discouraged in R, but there are sometimes
when they may be needed and so are possible.
One example where they are used is in random number generation, every
time a random number function is called (rnorm for example) the global
variable .Random.seed is updated so
just my2cent:
could you make a derived feature by including the desired predictor in
each of features you use to present to rpart?
(by the way, if I can understand your question right, I assume rpart
picks only one predictor each time at each node)
Best,
Weiwei
On 11/26/07, Wensui Liu [EMAIL
Others have shown some approaches that work well for after you fit the
model. Here is another approach starting with the model fit itself:
tmp - c(control, glucose, fructose,
gluc+fruct, sucrose)
treatment - factor(rep( tmp, each=10 ), levels=tmp)
length - c(75, 67,
Max a écrit :
Prof Brian Ripley explained :
On Mon, 26 Nov 2007, Max wrote:
Hi everyone, I'm trying to understand some R output here for ordinal
regression. I have some integer data called A split up into 3 ordinal
categories, top, middle and bottom, T, M and B respectively.
I have to
Hi R Gurus!
I have a package that I am putting together.
I waited until the end to do the documentation and would like to
generate a set of empty .Rd files.
Is there a quick way to do this, please?
Thanks,
Edna Bell
PS I can't seem to access the Writing R Extensions manual from 2.6.1
on
If the function is f, you can use prompt(f)
Sorry
thanks,
Edna
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented,
Edna,
maybe there is a way, but Rd files are not that difficult,
writing an empty one requires less time than writing this email.
Then just copy your empty file as many times as you want.
Gabor
ps. perhaps you didn't install the manuals. You can always read
the up-to-date versions at the R
Paul Smith [EMAIL PROTECTED] wrote in
news:[EMAIL PROTECTED]:
On Nov 26, 2007 7:45 PM, Gabor Csardi [EMAIL PROTECTED] wrote:
x - c(1,4,3)
freq - c(3,2,4)
rep(x, freq)
[1] 1 1 1 4 4 3 3 3 3
Thanks, Gabor. I had just tried
rep(1:10,10:20)
but should have tried
rep(1:10,11:20)
# Hello,
# I have a matrix that contains some missing values denoted by NA.
# I would like to calculate the mean for each column and not have the
# NA values included. here is a sample matrix X below.
c1 - c(1,4,3,2,NA,2,5,6,4,2)
c2 - c(1,3,6,NA,NA,2,9,6,1,2)
c3 - c(2,4,2,NA,4,2,NA,6,3,5)
c4
colMeans(X,na.rm=T)
?colMeans
2007/11/27, Luke Neraas [EMAIL PROTECTED]:
# Hello,
# I have a matrix that contains some missing values denoted by NA.
# I would like to calculate the mean for each column and not have the
# NA values included. here is a sample matrix X below.
c1 -
Luke
Check
?colMeans or help(colMeans)
you will see there is an agrument, na.rm, which by default is FALSE -
you need to set it to TRUE.
Peter Alspach
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Luke Neraas
Sent: Tuesday, 27 November 2007
Hi,
This is probably a case where someone has to see what is happening on
my computer and it is complicated by my data being from SPSS (not my
choice). It is quite hard to give my data, because it is such a large
dataset. I have analysed 9 other datasets that work fine, but this
Hello:
I have an lme object, say lme_res2, which was generated using the varIdent.
I'm trying to extract the double 1.532940 from the object, but I can't find it
by attributes(lme_res2) or attributes(summary(lme_res2)). How can I pull it
out (so that I can save it to another variable)?
Can you provide a small subset of the data that shows the problem. In
a sense, what you are doing with:
selectE-Data[Fatmethod== E,]
should pull your rows of interest. What does 'str(Data)' show? What
does 'str(selectE)' show? If you can at least include 10-20 rows of
data that show what is
Loren Engrav wrote:
It is clear that R and Bio are amazing resources and that many people invest
lots of time in making them work, thank you
Having said that
From the point of view of an R/Bio novice an improved method to find
packages would be very helpful as suggested by John Sorkin
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