On Fri, 2008-07-11 at 13:38 -0700, theBenjamin wrote:
I need to plot multiple sets of data, on one Ternary plot (from the VCD
package). Since they all need to be formatted differently, I can't just
coerce them into one matrix, I need three separate calls. Is there a way to
do this? Thanks
On Fri, 2008-07-11 at 13:25 -0500, Neil Gupta wrote:
Hello R users,
I would apprecaite any help to my current problem. I wanted to plot the
following data:
...
Hi Neil,
I just read the data in (as zoop), invoked
plot(zoop)
and got quite a respectable looking scatterplot. If you are
On Sat, Jul 12, 2008 at 7:44 AM, sj [EMAIL PROTECTED] wrote:
Hello,
I am trying to do some fairly straightforward data summarization, i.e., the
kind you would do with a pivot table in excel or by using SQL queires. I
have a moderately sized data set of ~70,000 records and I am trying to
Dear R users,
an update of the package ppls - Penalized Partial Least Squares - is now
available on CRAN.
It implements the methods described in
N. Krämer, A.-L. Boulesteix, G. Tutz
Penalized Partial Least Squares with Applications to B-Spline
Transformations and Functional Data
Chem.
I have search the archive and I could not find what I need so I will try to ask
the question here.
I read a table in (read.table)
a - read.table(.)
The table has column names like DayOfYear, Quantity, and Category.
The values in the row for Category are strings (characters).
I want to
Hi,
I have an error happened when I use exp() in my Fortran code. My Fortran
code is
SUBROUTINE f(n,c)
REAL, INTENT(IN) :: n(10)
REAL, INTENT(OUT) :: c(10)
INTEGER :: k
DO k=1, 10
c(k) = exp( n(k) )
Hey,
as a bloddy beginner in R I want to simulate a Arima (2,1,0) process with R.
My problem is, that I don't know how to specify the AR.
For a ARIMA(1,1,0) I use the following syntax: S -
arima.sim(list(order=c(1,1,0), ar=0.9), n=100).
I think it is a stupid question with an easy answer. But
Johannes Huesing wrote:
I am still trying to build a package. At the moment I am stuck with a
file not found error message when processing R code from the tests
subdirectory. What would be the accurate relative path for files in
the tests directory to access files in the data directory?
You
On 12/07/2008 3:56 AM, Hao Ren Sr wrote:
Hi,
I have an error happened when I use exp() in my Fortran code. My Fortran
code is
SUBROUTINE f(n,c)
REAL, INTENT(IN) :: n(10)
REAL, INTENT(OUT) :: c(10)
INTEGER :: k
DO k=1, 10
Hi Miklos.
If you want to install R packages to the /usr/lib/R/library directory you need
to start R with 'root' user privileges. Ordinary users do not have the
appropriate permissions to write to this directory. At the command line type:
sudo R
type your password when prompted.
You won't
Please provide commented, minimal, self-contained, reproducible code,
or at least a before/after of what you data would look like. Taking a
guess at what you are asking, here is one way of doing it:
x - data.frame(cat=sample(LETTERS[1:3],20,TRUE),a=1:20, b=runif(20))
x
cat a b
1
See sqldf home page:
http://sqldf.googlecode.com
e.g.
library(sqldf)
set.seed(1)
pti -rnorm(7,10)
fid - rnorm(7,100)
finc - rnorm(7,1000)
# set is a reserved word in SQL so use sset
sset - data.frame(fid,pti,finc)
system.time(out - sqldf(select fid, sum(pti) from sset group by
fid))
A slight modification gives the equivalent results instead of using 'tail'
m - matrix(rexp(6e6,rate=0.05), nrow=600) # 5,000 cols
m[m20] - 20
func1 - function(v,cut=20) max(which(v20))
func2 - function(v,cut=20) {
+ x - which(v20)
+ x[length(x)]
+ }
system.time(apply(m, 2, func1))
Hi all,
I have a problem when running lmer.
In my data set, Agree is a binary(0/1) response. WalkerID and ObsID is
the identification number of the subjects. the description of the
other variables are as follows:
levels(regdat$Display)
[1] Dynamic Static
levels(regdat$Survey)
[1] HM1_A HM1_B
On Sat, Jul 12, 2008 at 6:23 AM, Lan Wei [EMAIL PROTECTED] wrote:
Hi all,
I have a problem when running lmer.
In my data set, Agree is a binary(0/1) response. WalkerID and ObsID is
the identification number of the subjects. the description of the
other variables are as follows:
By the way, did you notice that the levels of Emotion include both
joy and joy . You may want to correct that.
On Sat, Jul 12, 2008 at 7:47 AM, Douglas Bates [EMAIL PROTECTED] wrote:
On Sat, Jul 12, 2008 at 6:23 AM, Lan Wei [EMAIL PROTECTED] wrote:
Hi all,
I have a problem when running lmer.
Hi Chris:
Please try:
ts.sim - arima.sim(list(order = c(2,1,0), ar = c(1.2,-0.4)), n = 200)
Hope this helps!
Sincerely,
Erin
On Sat, Jul 12, 2008 at 2:48 AM, Christopher Gürke
[EMAIL PROTECTED] wrote:
Hey,
as a bloddy beginner in R I want to simulate a Arima (2,1,0) process with R.
My
Hello,
I'm looking for a package/function which handles visualization of
multiple sequence alignments. Does something like this exist?
Thanks,
Schraga Schwartz
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
Hi all,
Worked looked around for a while on this to no avail. I'm trying to
create a plotmath expression that achieves:
Δi 0
and while:
expression(Delta*i0)
comes close, I'd prefer to have the (denoting very much greater
than). Maybe is a non-standard expression and therefore not
apparently he does
https://stat.ethz.ch/pipermail/r-packages/2007/000298.html
Felipe Carrillo wrote:
Hi (Hadley): Do you still have the ggplot2 book being published this
summer?
Felipe D. Carrillo Fishery Biologist Department of the Interior US
Fish Wildlife Service California,
have you tried reshape package?
library(reshape)
dfm - melt(dataframe, m = date)
You can find out more about reshape at http://had.co.nz/reshape
sprohl wrote:
Hello,
I have to merge several serie by date. I used:
cb-merge(cbds,cbbond,by=c(date),all=T).
I have the daily and the high
Hi Mike,
try:
plot(1:10, main=expression(paste(Delta*i, , 0)))
Christian
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide
As the note at the bottom says provide commented, minimal, self-contained,
reproducible code.
It is difficult to comment on a loop when we have no code to read.
--- On Fri, 7/11/08, Andrew Rominger [EMAIL PROTECTED] wrote:
From: Andrew Rominger [EMAIL PROTECTED]
Subject: [R] Help with
Hi everybody,
somehow i dont get the shapiro wilk test for normality. i just can´t
find what the H0 is .
i tried :
shapiro.test(rnorm(5000))
Shapiro-Wilk normality test
data: rnorm(5000)
W = 0.9997, p-value = 0.6205
If normality is the H0, the test says it´s probably not
This works on my Windows Vista system:
plot(1, main = \u394i \u300b 0)
See:
http://www.fileformat.info/info/unicode/char/300b/index.htm
http://www.fileformat.info/info/unicode/char/394/index.htm
On Sat, Jul 12, 2008 at 10:12 AM, Mike Lawrence [EMAIL PROTECTED] wrote:
Hi all,
Worked looked
At 11:30 AM 7/12/2008, Bunny, lautloscrew.com wrote:
Hi everybody,
somehow i dont get the shapiro wilk test for normality. i just can´t
find what the H0 is .
i tried :
shapiro.test(rnorm(5000))
Shapiro-Wilk normality test
data: rnorm(5000)
W = 0.9997, p-value = 0.6205
If
Hmm thanks,
But on the other hand it just says i cant reject normality, which
doesnt really mean it is normal. Wouldn´t be nice to test for non-
normality ? if i´d reject that a high level i could be pretty sure it
´s normal... ??
thanks in advance
matthias
Am 12.07.2008 um 18:10 schrieb
And this gives a slightly different one:
plot(1, main = \u394i \ubb 0)
2008/7/12 Gabor Grothendieck [EMAIL PROTECTED]:
This works on my Windows Vista system:
plot(1, main = \u394i \u300b 0)
See:
http://www.fileformat.info/info/unicode/char/300b/index.htm
I am using a simple R statement to read in the file:
a - read.csv(Sample.dat, header=TRUE)
There is alot of data but the first few lines look like:
DayOfYear,Quantity,Fraction,Category,SubCategory
1,82,0.390392720794458,(Unknown),(Unknown)
2,78,0.371349173438631,(Unknown),(Unknown)
. .
On 12/07/2008 12:31 PM, [EMAIL PROTECTED] wrote:
I am using a simple R statement to read in the file:
a - read.csv(Sample.dat, header=TRUE)
There is alot of data but the first few lines look like:
DayOfYear,Quantity,Fraction,Category,SubCategory
1,82,0.390392720794458,(Unknown),(Unknown)
Hello,
I'm looking for help on the best approach to get multi-value data fields into
R for simple descriptive analysis.
-
I am new to this list and new to R, but I really want to get over the hump and
get productive with it. Some help with how to best get
There might be a test that uses not normal as the HO but I don't know of
it. There's been a lot of discussion on this list in the past on the
pitfalls associated with tests of normality in general so maybe you
can find them in the archives.
I think you should figure out why you are testing for
(I checked the archive and it seems the entire text of my post was 'scrubbed' -
trying again)
Hello,
I'm looking for help on the best approach to get multi-value data fields into
R for simple descriptive analysis.
-
I am new to this list and new to R, but
Can you provide a more complete example (say 10 lines) of what the
input is like. Does each line have a unique index that can be related
to it? Do you want to summarize all the multi1-n values of Col2? Do
you want to know the percentage of input lines that have a
Col3/multi-value4 on them? You
On Fri, 11 Jul 2008, Dieter Menne wrote:
y
Jim Porzak jporzak at gmail.com writes:
I just noticed that CRAN Package check Error for Windows Mac:
http://www.r-project.org/nosvn/R.check/r-patched-windows-x86_64/odfWeave-00check.html
I've run into a problem with odfWeave 0.7.5 running
At 12:48 PM 7/12/2008, Bunny, lautloscrew.com wrote:
first of all thanks yall. it´s always good to get it from people that
know for sure.
my bad, i meant to say it´s compatible with normality. i just wanted
to know if it wouldnt be better to test for non-normality in order to
know for sure.
and
The Journal of Statistical Software was founded by Jan
de Leeuw in 1996. Currently, there are 26 volumes with 260
aricles and the journal publishes about 4 new volumes
per year. The web address is www.jstatsoft.org. All
articles are pdf files, since 2005 all produced from
JSS LaTeX templates.
Hi:
I have a dataset and need to interpolate for missing days. In Excel I either
average from sampled days from above and below the missing days or use the
TREND function to make up for the missing values. I have been reading about
na.approx, is this function similar to the TREND function?
From the R console I invoke:
install.packages(RWinEdt)
and get:
Warning in install.packages(RWinEdt) :
argument 'lib' is missing: using 'F:\Users\Kevin\Documents/R/win-library/2.7'
--- Please select a CRAN mirror for use in this session ---
trying URL
I am sorry but if read.csv returns a dataframe and a dataframe is like a matrix
and I have a set of input like below and a[1,] gives me the first row, what is
the second index? From what I read and your input I am guessing that it is the
column number. So a[1,1] would return the DayOfYear
Dear List,
I use Rgraphviz for display of graphs in some packages. Since Rgraphviz is no
longer on CRAN it needs to be installed from Bioconductor and that is fine, but
I have trouble figureing out the following: I create a plot method which - if
Rgraphviz is installed - uses Rgraphviz for
Hi, I would be careful with imputing values. Imputing is a disputed practice.
Also, you seem to have huge variation in your data with a nonlinear trend.
Since your data is time series data, you may consider modeling the time
series and then to predict n-time periods ahead and use these predicted
I think there is a problem with my file or with 'read.csv'.
As you said, a[1,] returns the first row
a[1,]
DayOfYear Quantity Fraction Category SubCategory
1 1 82 0.390392720794458 (Unknown) (Unknown)
a[2,] returns the second row
a[2,]
DayOfYear Quantity
Hello Miklos,
Do you have the build-essential package installed in Ubuntu? If not try
installing it, as it will install the basic tools needed for compiling
things from source. Also as Iain pointed out run R with sudo R from the
terminal if you want to install packages for all users i.e to
Yes. If you want read.csv to ignore quotes, the have as a parameter: quote=
What is happening is that otherwise it assumes you have values
enclosed in quotes because they might have spaces or the separator
character in them. You data (7 Plate) looks like a quoted string
starting after the 7.
Soren,
When I had an almost identical problem last
year. I also wanted to use Rraphviz but only if
people had it.
Kurt Hornik suggested that I replace a direct
call to the function, foo, that uses Rgraphviz
with
if(require(Rgraphviz)) foo()
Bill
At 10:23 PM +0200 7/12/08, Søren
Hi the list,
After months of keen work (!), thousands of questions on the R-help (and
on the French R forum GuR), I am pleased to announce the birth of new a
tutorial on S4:
*** A (Not So) short Introduction to S4 ***
http://christophe.genolini.free.fr/webTutorial/index.html
It
Bill,
Thanks for the suggestion, but it does not solve the problem; I get the same
warning from rcmd check. I suspect that rcmd check actually checks that any
package referred to in require() is declared in the DESCRIPTION file. From the
version numbers from your 'psych' package I guess you are
On 12/07/2008 3:59 PM, [EMAIL PROTECTED] wrote:
I am sorry but if read.csv returns a dataframe and a dataframe is like a matrix
and I have a set of input like below and a[1,] gives me the first row, what is
the second index? From what I read and your input I am guessing that it is the
column
On 12/07/2008 6:27 PM, Søren Højsgaard wrote:
Bill,
Thanks for the suggestion, but it does not solve the problem; I get the same
warning from rcmd check. I suspect that rcmd check actually checks that any
package referred to in require() is declared in the DESCRIPTION file. From the
version
The tricky part is not getting it through the checks on my computer. It is when
I upload to CRAN I get the problems, because their computers need Rgraphviz
as well... (Suggests does not seem to be the solution...)
Cheers
Søren
Fra: Duncan Murdoch
At 6:36 PM -0400 7/12/08, Duncan Murdoch wrote:
On 12/07/2008 6:27 PM, Søren Højsgaard wrote:
Bill,
Thanks for the suggestion, but it does not
solve the problem; I get the same warning from
rcmd check. I suspect that rcmd check actually
checks that any package referred to in
require() is
OK. Now I know that I am dealing with a data frame. One last question on this
topic. a - read.csv() gives me a dataframe. If I have 'c - split(x,
x$Category), then what is returned by split in this case? c[1] seems to be OK
but c[2] is not right in my mind. If I run ci - split(nrow(a),
[EMAIL PROTECTED] wrote:
OK. Now I know that I am dealing with a data frame. One last question on this topic. a
- read.csv() gives me a dataframe. If I have 'c - split(x, x$Category), then
what is returned by split in this case? c[1] seems to be OK but c[2] is not right in my
mind. If I run
Is this something like what you were asking for? The output of a
'split' will be a list of the dataframe subsets for the categories you
have specified.
x - data.frame(g1=sample(LETTERS[1:2],30,TRUE),
+ g2=sample(letters[1:2], 30, TRUE),
+ g3=1:30)
y - split(x, list(x$g1, x$g2))
str(y)
MIklos,
You may have missed this part of the Ubuntu README on CRAN:
Users who need to compile packages should also install the r-base-dev
package:
sudo apt-get install r-base-dev
This will fetch all the standard tools you need to compile packages.
If you have more Ubuntu specific
Thanks for the reply Jim.
Here is a representation of the data I want to analyze - 10 records as
requested. Each line can easily include an ID number as below.
So I want to determine a frequency or percentage of respondents that bring each
of the 5 foods (Hamburgers, Hot Dogs, Potato Salad,
This is almost it. Maybe it is as good as can be expected. The only problem
that I see is that this seems to form a Category/SubCategory pair where none
existed in the original data. For example, A might have two sub-categories a
and b, and B might have two categories c and d. As far as I can
Thank you. This was very informative.
When I run this command (str(y)), I get something like:
$ WOMEN.X MEN 3
:'data.frame': 0 obs. of 5 variables:
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