Em 20-12-2011 14:09, MacQueen, Don escreveu:
Or:
require(xlsx)
test- function(x){
+a- data.frame(A=c(1,2),B=c(10,11))
+write.xlsx(a,file=a.xlsx)
+ }
test()
list.files(patt='xlsx')
[1] a.xlsx
Thanks,
with the write.xlsx all work.
Inte
Ronaldo
--
3ª lei - Na investigação
Hello,
I am trying to make a plot using the code below. The plot is divided into two
parts, using facet_grid. I would like the vertical axis (labelled 'place') to
be different for each location (=part). So in the upper part, only places 'n'
through 'z' are shown, while in the lower part, only
Hello,
Maybe this will help:
There is rgeos package
with gContains, gCovers, etc.
It is a full implementation of Java Topology Suite
http://cran.r-project.org/web/packages/rgeos/rgeos.pdf
--
Kind regards,
Antonio Rodriges
__
R-help@r-project.org
On Wed, Dec 21, 2011 at 1:06 PM, David Samuel
david.sam...@ons.gsi.gov.uk wrote:
To R Support Team,
Could you please let me know if ONS would be allowed to view your
software's source code?
If proof was ever needed that people don't read software license
agreements, this is it.
Is there a
Perfect! combn was the trick I needed. Although I'll probably rbind
the stuff instead of building a new frame. :)
On Thu, Dec 22, 2011 at 6:48 PM, Sarah Goslee sarah.gos...@gmail.com wrote:
I'm not at all sure what you mean with your matrix: is that supposed to
be three columns? What about:
On 12/20/2011 12:54 PM, Antonio Rodriges wrote:
Hello,
Is there a way to find points in SpatialPoints which lie inside a given
Polygon?
Hi,
Take a look at the over function from the sp-package.
Paul
--
Paul Hiemstra, Ph.D.
Global Climate Division
Royal Netherlands Meteorological
On 12/23/2011 07:52 AM, Ben Neal wrote:
Have made a stacked area plot, but now want to manipulate the x axis: make in
even increments (50) in order to suppress the tick marks (forming solid bar
under plot). However, the plot functions do not seem to work, and I cannot find
documentation for
On 12/23/2011 08:26 AM, Albert-Jan Roskam wrote:
Hello,
I am trying to make a plot using the code below. The plot is divided into two
parts, using facet_grid. I would like the vertical axis (labelled 'place') to
be different for each location (=part). So in the upper part, only places 'n'
On 12/23/2011 09:53 PM, Jim Lemon wrote:
CaribMatrix-matrix(order(sample(200:500,579,TRUE),nrow=579,ncol=3)
Oops, that should be
CaribMatrix-matrix(sort(sample(200:500,579,TRUE),nrow=579,ncol=3)
Jim
__
R-help@r-project.org mailing list
Merry Xmas to all,
I am writing a function and curiously this runs sometimes on one data set
and fails on another and i cannot figure out why.
Any help much appreciated.
If i run the code below with
data - iris[ ,1:4]
The code runs fine, but if i run on a large dataset i get the following
error
I am trying to solve the following problem using the mmap package:
1.) Store some data as a memory mapped file that resides on the disk.
2.) Open the data and add some new data (or change it) to that file.
1.) works fine using the following code:
cFile -tempfile()
dfrData -
Dear Dieter
There has been some effort examining Lasso-type estimators for mixed models.
It is more involved than with other type of models.
We have studied Gaussian and generalized linear mixed models including a
Lasso-type penalty for the fixed effects and we are now able to provide two
For example, prepare like this
df.0 - data.frame(x = 0, y = 0, note = 1)
df.1 - subset(df.0, note == 1)
df.2 - subset(df.0, note == 2)
Then a call to
ggplot() + aes(x = x, y = y) +
geom_point(data = df.1) + geom_point(data = df.2)
produces the error
Error in eval(expr, envir, enclos) :
Does this look similar to the error you are getting:
while(NA == TRUE) 1
Error in while (NA == TRUE) 1 : missing value where TRUE/FALSE needed
SO 'notconverged' is probably equal to NA. BTW, what is the value of
'tol'; I do not see it defined. So when computing 'notconverged' you
have
On Fri, Dec 23, 2011 at 1:06 AM, Taral tar...@gmail.com wrote:
Perfect! combn was the trick I needed. Although I'll probably rbind
the stuff instead of building a new frame. :)
You should try rbind() with the small example I gave before you use it
on your data. You'll immediately see why I
See https://github.com/hadley/ggplot2/issues/31 - I totally agree that
it's annoying.
Hadley
PS. You are more likely to get helpful responses about ggplot2 on the
ggplot mailing list.
On Fri, Dec 23, 2011 at 7:08 AM, Casper Ti. Vector
caspervec...@gmail.com wrote:
For example, prepare like
The help page for ?Extract says:
When extracting, a numerical, logical or character NA index picks an
unknown element and so returns NA in the corresponding element of a
logical, integer, numeric, complex or character result, and NULL for a
list. (It returns 00 for a raw result.]
On 23.12.2011 11:02, KUMAR wrote:
Hi,
I am using R version 2.14.0 on windows 7. Trying to use RCOM
package and followed example provided at
(http://cran.r-project.org/web/packages/rcom/rcom.pdf) .
Please ask on the mailing list that was set up for that package.
I wonder: Do
Thanks, I'll post to that list if the encountered problem is just about
ggplot2.
And from the date of the issue on GitHub it seems that I might need to
manually work around the problem some more times :)
On Fri, Dec 23, 2011 at 08:10:05AM -0600, Hadley Wickham wrote:
See
Pascal A Niklaus pascal.nikl...@ieu.uzh.ch
on Mon, 19 Dec 2011 20:46:57 +0100 writes:
Dear all, I am not sure if this mail is for R-help or
should be sent to R-devel instead, and therefore post to
both.
While using nlrob from package 'robustbase', I ran into
the
I have a problem where I need to calculate the corresponding cohort
percentile ranks for each of several variables.
Essentially, what I need is a function that will calculate the
distribution-free percentiles from each variable's data vector, returning a
corresponding vector of percentiles:
I've been running a glmer logit on a very large data set (600k obs).
Running on a 10% subset works correctly, but for the complete data set,
R completes apparently without error, but does not display the results.
Given these jobs take about 200 hours, it's very hard to make progress
by trial and
this is how the ouput from the code should be
structure(list(HTN = 1:10, HTN_FDR = structure(c(4L, 2L, 1L,
2L, 3L, 1L, 1L, 2L, 3L, 2L), .Label = c(Ctrl_noc, T1D_noc,
T1D_oc, T1d_w), class = factor), Dyslipidemia = structure(c(3L,
2L, 1L, 2L, 4L, 1L, 1L, 2L, 4L, 2L), .Label = c(Ctrl_noc,
Apologies, I was using top = 0.0001
I had looked at browser and did show notconverged = NA. But I couldn't
understand why it worked for one and not the other?
On Friday, 23 December 2011, jim holtman jholt...@gmail.com wrote:
Does this look similar to the error you are getting:
while(NA ==
Hi,
I need help writing a function
I capture seal pups mutliple times during the lactation season in order to
monitor their growth rate. When I release them, the recovery (mother-pup)
time is not the same for all individuals. I want to know if individuals that
recover their
Please ignore my previous posting, in the meanwhile I have realised that I
did not look carefully enough how nlrob works (irls), although this is
pretty obvious from the code.
The only issue that remains is the case of zero weight for redescending M
estimators, in which case NaN's are produced. I
Given that the maximum floating point value is:
$double.xmax
[1] 1.797693e+308
and the number you are trying to calculate is 5E323 you are exceeding
the size of numbers you can process.
Have a happy holiday and glad I could help.
On Fri, Dec 23, 2011 at 11:24 AM, Michael Pearmain
I'm not sure I understand the question, but does quantile() do what you want?
On Fri, Dec 23, 2011 at 10:28 AM, Steve Jones sjone...@jhmi.edu wrote:
I have a problem where I need to calculate the corresponding cohort
percentile ranks for each of several variables.
Essentially, what I need is
On Fri, Dec 23, 2011 at 9:25 AM, 1Rnwb sbpuro...@gmail.com wrote:
this is how the ouput from the code should be
What code might that be?
Readers of the R-help email list have no idea whatsoever what you're asking.
Please include context, as requested in the posting guide.
Sarah
On Dec 23, 2011, at 10:28 AM, Steve Jones wrote:
I have a problem where I need to calculate the corresponding cohort
percentile ranks for each of several variables.
Essentially, what I need is a function that will calculate the
distribution-free percentiles from each variable's data vector,
It's far more useful to send your explanation to the list than it is to send it
just to me. I've taken the liberty of doing so.
But this does sound like a job for ecdf() - what did you do, and what went
wrong?
On Fri, Dec 23, 2011 at 12:23 PM, Steven Jones sjone...@jhmi.edu wrote:
Actually,
You might find the ggplot mailing list a friendlier place to ask
questions about ggplot2.
Hadley
On Wed, Dec 21, 2011 at 2:16 PM, rachaelohde cox.rach...@gmail.com wrote:
Hello,
I am trying to plot means and standard errors conditioned by a factor, using
qplot. I am successful at getting the
You are more likely to get a helpful response if you provide a
reproducible example - without that I can only guess that you need to
use approx so you get y values at same x values.
Hadley
On Wed, Dec 21, 2011 at 8:13 AM, UncleFish bpn...@ucsd.edu wrote:
I wish to make a stacked area chart of a
On Wed, Dec 21, 2011 at 9:28 AM, arunkumar akpbond...@gmail.com wrote:
Hi,
can anyone please explain why the vif should have more than 2 terms.
*vif.lm(lmobj) : model contains fewer than 2 terms*
why it is throwng error if it is one variable.
The _VIF_ is a measure of
This seems like what you are interested in:
x - rnorm(50)
ecdf(x)(x)
Michael
On Fri, Dec 23, 2011 at 11:26 AM, Sarah Goslee sarah.gos...@gmail.com wrote:
It's far more useful to send your explanation to the list than it is to send
it
just to me. I've taken the liberty of doing so.
But
All questions related to rcom, statconnDCOM, and RExcel
should be posted on the mailing list of the statconnDCOM project.
You can subscribe at
http://rcom.univie.ac.at
On 12/23/2011 11:02 AM, KUMAR wrote:
Hi,
I am using R version 2.14.0 on windows 7. Trying to use RCOM
library(reshape2)
x = melt(airquality, id=c('month', 'day'))
With reshape I can cast with multiple functions:
library(reshape)
cast(x, month+variable~., c(mean,sd))
month variable mean sd
1 5ozone 23.615385 22.224449
2 5 solar.r 181.296296 115.075499
3
First, it may be a good idea to use 1 for âyesâ and 0 for ânoâ in the
motherrecovery column.
Then if you name your table e.g tab1, you may try something like this..
sum(tab1[,2]==1*tab1[,4])/sum(tab1[,2]==1)
2011/12/23 Joanie Van De Walle joanie.van-de-wall...@ulaval.ca
Hi,
I
I need to construct a custom XML reader, the files I'm working with are in
funky XML format:
str name=authorPaul H/str
str name=countryUSA/str
date name=created_date2010-02-16/date
I want to read the file so it looks like:
author = Paul H
country = USA
created_date=2010-02-16
Does any one
Yes, thanks for the direction. I am new to the list and new to R, and I can see
that was not a very helpful description.
I have since resolved my issue. My main issue was that stackpoly does not (I
think) interact with XOO objects or ts object, and my secondary issue was that
my time series
I just wrote this up for a project, perhaps 5 years is better than never...
code
cuzick = function(x,z,test.type=c(two.sided, upper, lower)) {
N = length(z)
n = unique(z)
ranks=rank(x)
T = sum(ranks*z)
p = (table(z)/N)
E_Z = sum(unique(z)*p)
Meant to say ZOO objects . . .
-Original Message-
From: Ben Neal [mailto:bn...@spg.ucsd.edu]
Sent: Fri 12/23/2011 10:15 AM
To: Hadley Wickham; UncleFish
Cc: r-help@r-project.org
Subject: RE: [R] Stacked area plot for time series
Yes, thanks for the direction. I am new to the list and
Thank you. That helps me understand the issue better. I came up with a similar
solution . . . but yours is more elegant (I just wrote out the labels . . ).
My solution follows:
stackpoly(CaribMatrix, stack=TRUE, xlab=Year,ylab=Catch in tons,
col.main=red, font.main=4,
Hi,
On 22 December 2011 09:16, rachaelohde cox.rach...@gmail.com wrote:
Hello,
I am trying to plot means and standard errors conditioned by a factor, using
qplot. I am successful at getting the bar graph I want with a error bar,
however I have tried many things and cannot get the bars to
On Dec 23, 2011, at 2:58 PM, Kaiyin Zhong wrote:
library(reshape2)
x = melt(airquality, id=c('month', 'day'))
With reshape I can cast with multiple functions:
library(reshape)
cast(x, month+variable~., c(mean,sd))
month variable mean sd
1 5ozone 23.615385
On Dec 23, 2011, at 5:58 PM, David Winsemius wrote:
On Dec 23, 2011, at 2:58 PM, Kaiyin Zhong wrote:
library(reshape2)
x = melt(airquality, id=c('month', 'day'))
With reshape I can cast with multiple functions:
library(reshape)
cast(x, month+variable~., c(mean,sd))
month variable
Hi everyone?
Does anybody know how can I estimate a
Latent class multinomial (or conditional) logit using R?
I have tried flexmix, poLCA, and
they do not seem to support this model.
thanks in advance
adan
--
View this message in context:
You may have a look at lcmixed/flexmixedruns in package fpc. This provides
flexmix methods that can be used to fit latent class models with locally
independent multinomials (no logits, though, and I'm not sure that for
categorical data only this is much different from what poLCA offers).
Best
Hello,
There are so many people posting answers that I'm curious and decided to try
one.
I don't know if this is it but it doesn't give an error and it reformats
your data
according to the rules in your original code.
#
nr - dim(c1)[1]
nc - dim(c1)[2]
c2 - NULL
c2_row - rep(, nc-1)
for(i in
Joanie Van De Walle wrote
Hi,
I need help writing a function
I capture seal pups mutliple times during the lactation season in order
to
monitor their growth rate. When I release them, the recovery
(mother-pup)
time is not the same for all individuals. I want to know if
Hello,
I want to do fisher test for the rows in data file which has value less than
5 otherwise chi square test .The p values from both test should be stored in
one resulted file. but there is some problem with bold if statement. I don't
know how
implement this line properly.
x =
Hi Jean,
Thanks for the help. I couldn't quite get the results I needed with the
merge command, but I ended up using the following work-around:
Weather - read.csv(Weather.csv)
Weather$diff.time - abs(.5 - Weather$TimeNumeric)
agg - aggregate(diff.time ~ Date, data = Weather, FUN = which.min)
Sorry, in the function body, NO 'tab1', use 'x' only:
recovery.rate - function(x) unlist(lapply(split(x, x[,2]), function(x)
mean(x[[4]]==y)))
The error is because 'tab1' existed in the environment and the function
would find it.
This time, tested after removing 'tab1'.
Rui Barradas
--
View
reena wrote
Hello,
I want to do fisher test for the rows in data file which has value less
than 5 otherwise chi square test .The p values from both test should be
stored in one resulted file. but there is some problem with bold if
statement. I don't know how
implement this line
Hi Christian,
Thanks a lot for the suggestion.
As you expected, lcmixed does not provide more functionality than poLCA for
the case of
only categorical data...
Do you know whether there is an explanation (some technical difficulty I
may be missing, I am Economist so it is very likely) of why I
Hi Andy,
On Dec 23, 2011, at 2:51 PM, pl.r...@gmail.com wrote:
I need to construct a custom XML reader, the files I'm working with are in
funky XML format:
str name=authorPaul H/str
str name=countryUSA/str
date name=created_date2010-02-16/date
I want to read the file so it looks
On Fri, Dec 23, 2011 at 1:58 PM, Kaiyin Zhong kindlych...@gmail.com wrote:
library(reshape2)
x = melt(airquality, id=c('month', 'day'))
With reshape I can cast with multiple functions:
library(reshape)
cast(x, month+variable~., c(mean,sd))
month variable mean sd
1 5
Have you looked at the .summarise argument to dcast? That seems to deliver
the same sort of results one gets with base::aggregate.
Actually I see after looking at examples on the plyr-reshape-googlegroups
group that it is not '.summarise' but rather 'summarise'. Unfortunately
there are no
Matt Considine wrote
Hi,
I am trying to work with the output of the MINE analysis routine found at
http://www.exploredata.net
Specifically, I am trying to read the results into a matrix (ideally an
n x n x 6 matrix, but I'll settle right now for getting one column into
a matrix.)
On Dec 23, 2011, at 9:23 PM, Hadley Wickham wrote:
Have you looked at the .summarise argument to dcast? That seems to
deliver
the same sort of results one gets with base::aggregate.
Actually I see after looking at examples on the plyr-reshape-
googlegroups
group that it is not
I don't know if timeboxing is the correct term to use to accomplish
what I'm attempting, so allow me to explain. I have a set n of tagged
observations in time series t. What I'm interested in is taking i
seconds before and after every n. My code is below:
# observations.xts is an xts time series
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