Re: [R] Reading several tables from stdin

Since you don't seem to recognize the term sessionInfo, you definitely need to read the posting guide. See the link at the bottom of the message. RSiteSearch(XML) is a good tool to know about. --- Jeff Newmiller

Re: [R] noob requesting help

Hello, Now the output of str() says 'dat' is a list not a data.frame. That's why R is complaining about dimensions (lack of, in this case). Try dat2 - data.frame(do.call(cbind, dat), stringsAsFactors=FALSE) Then run the lapply() Also, if dput(head(dat, 20)) is very big, ommit the argument

[R] merge many files together using R

I have hundreds of text files which has data like a data frame with three columns.The column names are same in all the files.I need to merge all files into a single big file. My files are like this file1 new.col ppm.p. freq.p. 1_3_diaminopropane 3.13859 5.67516 1_3_diaminopropane 3.137 6.65388

[R] fixed trimmed mean for j-group

Hello...i want to find the empirical rate for type 1 error using fixed trimmed mean. To make it easy, i'm referring to journal given by this website http://www.academicjournals.org/ajmcsr/PDF/pdf2011/Yusof%20et%20al.pdf. I already run the programme and there is no error in it but i got zero for

[R] need help in sentiment analysis

hello I am doing sentiment analysis using score.sentiment... from the below link you can see how this work... http://dl.dropbox.com/u/2698672/sentiment.r I want to do some modification in this code what this score.sentiment is doing is that its taking a sentence like I am very happy,

Re: [R] need help in sentiment analysis

you can see the whole algorithm of sentiment analysis from the below link http://www.dataissexy.co.uk/twitter-sentiment-analysis-in-30-seconds -- View this message in context: http://r.789695.n4.nabble.com/need-help-in-sentiment-analysis-tp465p466.html Sent from the R help mailing list

[R] how to export output

hello, I am using following command classify_polarity(documents,algorithm=bayes,verbose=TRUE) output is: [1] DOCUMENT 1 [1] WORD: excited CAT: positive POL: strongsubj SCORE: 8.44419229853175 [1] WORD: happy CAT: positive POL: strongsubj SCORE: 8.44419229853175 [1] WORD: optimistic CAT: positive

Re: [R] Decision Trees or Markov Models for Cost Effectiveness

hi Noah, you might want to look at http://goo.gl/KqXpJ -- haven't played with it, and was actually surprised because whenever i think about decision trees -- which as you know are completely different from CART type of models -- i tend to think of excel add-ons or treeage. interested in learning

[R] Lowest number in a numeric string

Hi all, I've got a very long numeric string. I want to find the lowest number that isn't in that string. E.G String = 123456 Therefore 7 is the lowest number not in that string E.G.2 String = 1234567891011 Therefore 13 is the lowest number not in that string. Any thoughts? p.s. I'm an R

Re: [R] R and Ruby integration using RSruby gem

you might want to look at http://goo.gl/g6hGK On Mon, Jun 11, 2012 at 12:53 PM, Ashy43 ashy4...@gmail.com wrote: Hi All, Could anyone please tell the installation steps of RSruby gem on Windows XP. I have latest version of ruby R installed on Windows. Thanks -- View this message in

[R] Parameter estimation of a model with markov RHmm

Hi, Firstly, I want to apologize for my english. For a project, I have to estimate parameter estimation of a Markov model with the package RHmm. But I don't know how to. I have to use the EM algorithm. I don't understand what is the second parameter in the function asymptoticCov(HMM, obs). If

Re: [R] where to find a host server with R

EC2 is an option http://goo.gl/uw0Ze On Tue, Jun 12, 2012 at 4:03 PM, Xiaokuan Wei weixiaok...@yahoo.com wrote: Hi, I am building a website with using R and bioconductor packages. I am wondering where I can find a good quality hosting service which provides servers running R and allows me

Re: [R] need help in sentiment analysis

result can be in the following way also score positive_score negative_scoretext 3 3 0 I am very happy, excited, and optimistic. -- View this message in context:

Re: [R] separate the sentence after finding a particular word

hello Can you help me further Is this possible to get output in the following way- [1 ]I love to watch movies of Hollywood but should not be romantic...I want to join you school but due to bad financial condition I cant.. [2] I want output in following format [3] I love to watch

Re: [R] merge many files together using R

Hello, Suppose your files list is called 'flist'. And that your files have blanks as separators. dflist - lapply(flist, read.table, header=TRUE, stringsAsFactors=FALSE) big - do.call(rbind, dflist) You can get a list of all files you want with list.files(). See ?list.files Hope this

Re: [R] Lowest number in a numeric string

On 06/14/2012 06:08 PM, mogwai84 wrote: Hi all, I've got a very long numeric string. I want to find the lowest number that isn't in that string. E.G String = 123456 Therefore 7 is the lowest number not in that string E.G.2 String = 1234567891011 Therefore 13 is the lowest number not in that

Re: [R] asign variables in a for loop

On 06/13/2012 11:41 PM, Nympha Nymphaea wrote: Dear R-helpers, I'm stuck with a little problem that surely has an easy solution but I can't think of a way to solve it. I'd really appreciate any help you can offer me! I'll provide a small example. Given a dataframe data.txt that looks like

Re: [R] Lowest number in a numeric string

On Thu, Jun 14, 2012 at 01:08:53AM -0700, mogwai84 wrote: Hi all, I've got a very long numeric string. I want to find the lowest number that isn't in that string. E.G String = 123456 Therefore 7 is the lowest number not in that string E.G.2 String = 1234567891011 Therefore 13 is

[R] plot cdf

Good Afternoon, I'm trying to create a cdf plot, with the following code.It works well, but I have little doubt, if you can help solve.When I create the plot, like the graph line would still not appear with point #cdf x-table(Dataset$Apcode) View(s) hist(s) *plot(ecdf(x))* x-1

[R] density plot on a log scale

I'm working with a large dataset - large enough that when I do a scatter plot the points all blur together, so I want to plot their density by color - a heat map or something like that. I've used smoothScatter for tasks like this, but the problem is that my current dataset really only looks good

[R] Open windows explorer with specific path using system command

Hello! I found out that it is possible to open the windows explorer with a predefined path via the cmd.exe program using the following command: explorer PATH Back in R using the following command opens up the windows explorer: system(explorer, intern=TRUE) However, when I specify a path R

Re: [R] Lowest number in a numeric string

On Thu, Jun 14, 2012 at 01:08:53AM -0700, mogwai84 wrote: Hi all, I've got a very long numeric string. I want to find the lowest number that isn't in that string. E.G String = 123456 Therefore 7 is the lowest number not in that string E.G.2 String = 1234567891011 Therefore 13 is

Re: [R] asign variables in a for loop

Thank you so much Sarah and Jim, both solutions worked perfectly!! I still have so much to learn about R, and this fantastic team motivates me a lot! I'd like to congratulate to all people that makes this work so well, it's so useful for those of us that are just beginning with R... and surely to

[R] p-values from lm()

Hi everyone! Can anyone tell me, how to obtain p.values from a linear model? Example: mod1-lm(dV~iV1+iV2) Now, I can get the coefficients with mod1$coef But how can I get p-values? ($p.values seems to work with cor.test() only) Thank you! [[alternative HTML version deleted]]

Re: [R] p-values from lm()

Hello, What do you want to do with these p-values? Best Regards Le 12/06/14 19:44, David Studer a écrit : Hi everyone! Can anyone tell me, how to obtain p.values from a linear model? Example: mod1-lm(dV~iV1+iV2) Now, I can get the coefficients with mod1$coef But how can I get p-values?

[R] gsub

Hi,   I have a string t1=(Ithis) I(test). I need to get t2=(Ithis) test.   Can someone look into this. ?I have tried using gsub(I[^)],,t1) , but didn't get the required result.   Thanks, Pratap [[alternative HTML version deleted]] __

[R] Question about sampling

Dear list I wish to extract from a population genotypized for 10 SNP a subsample of the same population of size n with similar allele frequencies. Essentially i have a matrix of 200 rows (df) like this Name,Condition,rs1385699_X,rs6625163_X,rs962458_X,Rs4658627_1, sample01,Case,1,1,1,-1

Re: [R] p-values from lm()

Dear David, Try summary(mod1)$coef[,4] Best Ozgur -- View this message in context: http://r.789695.n4.nabble.com/p-values-from-lm-tp4633357p4633361.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list

[R] finite mixture modeling

Hi all, I have a question, is there any R package dealing with latent transition analysis with both categorical and continuous indicators? So far what I found from GOOGLE are only packages dealing with latent class analysis. So what about the longitudinal situation? Any way we could look at

[R] Cholesky decomposition error

Dear friends, When I do Cholesky decomposition for a 15x15 matrix using the function chol(), I get the following error for which I do not understand the meaning of the error Error in chol.default(M_cov) : the leading minor of order 10 is not positive definite When I searched online for

Re: [R] Open windows explorer with specific path using system command

On Jun 14, 2012, at 12:14 , syrvn wrote: Hello! I found out that it is possible to open the windows explorer with a predefined path via the cmd.exe program using the following command: explorer PATH Back in R using the following command opens up the windows explorer:

Re: [R] density plot on a log scale

On 06/14/2012 07:08 PM, field.cady wrote: I'm working with a large dataset - large enough that when I do a scatter plot the points all blur together, so I want to plot their density by color - a heat map or something like that. I've used smoothScatter for tasks like this, but the problem is

[R] Complex summary of counts of rank positions over multiple dataframes

Hi, I've kind of a tricky question, which I don't know how to solve yet: I get multiple dataframes loaded (readRDS) in a loop function. Each loaded dataframe contains two columns one with a var-name and one with a value. The rownumber (order) is very important as it is a value of the rank

Re: [R] finite mixture modeling

Have you manually searched the CRAN Task Views? Sometimes you'll find something there that searches won't pick up. -- Bert On Thu, Jun 14, 2012 at 4:12 AM, ya xinxi...@163.com wrote: Hi all, I have a question, is there any R package dealing with latent transition analysis with both

[R] Increase the word list in the sentiment analysis

Hi, I'am using the sentient analysis available in R2.15. Now the challenge that I'am facing is that the Naïve Baye's has an inbuilt list of 6500 words in which it has been trained. So my question that can I increase the number of words on which this algorithm is trained? In case i can increase

[R] odfWeave, xtable and tex

Hello, I try to use xtable under odfWeave. With echo=FALSE,results=xml= library(xtable) xtable(iris) @ this results in an endless list of xmlParseEntityRef: no name On internet I find that results should be tex: echo=FALSE,results=tex=

Re: [R] Cholesky decomposition error

Your matrix is not symmetric, positive definite. If you don't know what this means, you shouldn't be using chol() This may be because it isn't to begin with, or due to numerical error, it doesn't behave as one in the decomposition. My relative ignorance of numeric methods for linear algebra

Re: [R] Question about sampling

sample() takes a prob = argument which lets you supply weights, which need not sum to one so, if I understand you, you could just pass TRUEs and FALSEs for those rows you want. If I'm wrong about that last bit, I'm still pretty confident sample(prob = ) is the way to go. Best, Michael On Thu,

Re: [R] noob requesting help

On Jun 14, 2012, at 3:20 AM, Rui Barradas wrote: Hello, Now the output of str() says 'dat' is a list not a data.frame. That's why R is complaining about dimensions (lack of, in this case). Try dat2 - data.frame(do.call(cbind, dat), stringsAsFactors=FALSE) The construction

Re: [R] p-values from lm()

Hi David, summary(res)$coefficients[,Pr(|z|)] or summary(res)$coefficients[,4] M Regrads Le 14/06/12 12:44, David Studer a écrit : Hi everyone! Can anyone tell me, how to obtain p.values from a linear model? Example: mod1-lm(dV~iV1+iV2) Now, I can get the coefficients with mod1$coef

[R] glht multiple comparisons for glm with 2 factors

Hi All, I have used glm to model my data, I have two factors and a covariate as described in the example code below (mod.1). I have been able to force glht to perform multiple comparisons by creating a combined variable for the factors, accepting that there will be a loss of statistical power

Re: [R] gsub

On Jun 14, 2012, at 13:03 , nalluri pratap wrote: Hi, I have a string t1=(Ithis) I(test). I need to get t2=(Ithis) test. Can someone look into this. ? Well, you can, it is your problem You need to look into the hairier parts of regular expression syntax. Looks like the problem

[R] R matrix help

Dear R experts, I am interested in getting the dimensions for the matrix dynamically, based on the the number of elements in a matrix for example. if the number is 12, I should get dim= 3X4, if it is 20, dim=5X4. please help me do this. Thank you Regards karthick -- View this message in

Re: [R] how to export output

Hello, Try sink(sentiment.txt) classify_polarity(...etc...) sink() If this doesn't do it see ?capture.output Hope this helps, Rui Barradas Em 14-06-2012 09:13, raishilpa escreveu: hello, I am using following command classify_polarity(documents,algorithm=bayes,verbose=TRUE) output is:

Re: [R] gsub

sub(I\\((.*?)\\), \\1, t1) # nongreedy [1] (Ithis) test On Thu, Jun 14, 2012 at 7:03 AM, nalluri pratap pratap_s...@yahoo.co.in wrote: Hi, I have a string t1=(Ithis) I(test). I need to get t2=(Ithis) test. Can someone look into this. ?I have tried using gsub(I[^)],,t1) , but didn't get

[R] Transform date - style

Hello, is there any posibility to automatically transform this date notation X01.11.2010 into 01.Nov.10 ? I did not see it before starting my simulation and now I have to deal with it. It is no problem for my calculations but for my graphical outputs I would like to

Re: [R] gsub

Hello, Try t1 - (Ithis) I(test) t2 - (Ithis) test t3 - sub(I\\((.+)\\), \\1, t1) t2 == t3 #[1] TRUE If there are more than one occurences, use 'gsub'. Hope this helps, Rui Barradas Em 14-06-2012 12:03, nalluri pratap escreveu: Hi, I have a string t1=(Ithis) I(test). I need to get

Re: [R] Help for boxplot

-Original Message- First, i use the BOXPLOT() and SUBSET() to produce the box plot of all the 5 funds performance individually: ... *So the FIRST QUESTION is how to eliminate the other 5 strategies on the Y-aix? * either use

Re: [R] noob requesting help

Hello, Thanks, I wasn't really liking it very much but it more of a diffuse feeling than of a founded thought. It's good to see an example. Rui Barradas Em 14-06-2012 14:22, David Winsemius escreveu: On Jun 14, 2012, at 3:20 AM, Rui Barradas wrote: Hello, Now the output of str() says

[R] Time difference between two dates/timing

Hi, Here, i have a matrix like this MyMatrix - *DATETIMEHEADER1HEADER2* 1/1/2010 0:10 197.1947 100.0859 1/1/2010 0:20 203.8811 100.1013 1/1/2010 0:30 206.564 100.0433 1/1/2010 0:40 207.9563

Re: [R] Transform date - style

Try this: old.date - X01.11.2010 new.date - format(as.Date(old.date,format=X%d.%m.%Y),%d.%b.%y) [1] 01.Nov.10 -- View this message in context: http://r.789695.n4.nabble.com/Transform-date-style-tp4633377p4633381.html Sent from the R help mailing list archive at Nabble.com.

Re: [R] Question about sampling

Sorry I'm not sure that prob is suitable for my purposes(but i'm quite newbie with R). If I correctly understand prob allows to set a weight for each row in the original dataset in order to include the rows on the basis of their weights). ... I'm not sure to correctly understanding ;-) In my case

[R] read.table and variable length of tables

Hi, I am trying to read in weather balloon data, where each file has a header of fixed length and a trailing section of a fixed length. The data section (the table) is of variable length. An example of the data is on:

Re: [R] separate the sentence after finding a particular word

Hello, I don't understand, do you want to output: 1st line: the original input line 2nd line: I want output in following format -- this line 3rd line and following: the input line broken by the patterns Then just f - function(x, pattern) unlist(strsplit(x, pattern)) x - I love to watch

Re: [R] Median line with stripchart

-Original Message- From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On Behalf Of Luigi Sent: 14 June 2012 00:44 To: dcarl...@tamu.edu Cc: r-help@r-project.org Subject: Re: [R] Median line with stripchart Sorry for the inconvenience, I have added an

Re: [R] Cholesky decomposition error

Hello, Hello, If the input matrix is symmetric, positive definite then the Cholesky decomposition algorithm is stable. That's why it is so used in statistics, where many times the matrices meet those conditions. Therefore, the matrix isn't symmetric, positive definite to begin with. Rui

[R] matrix manipulation

Dear Rlisters, I'm writing to ask how to manipulate a matrix or dataframe in a specific way. To elaborate, let's consider an example. Assume we have the following 3 by 4 matrix A with elements either 0 or 1, 0 1 1 0 1 0 1 1 0 0 0 1 From the original matrix A, I'd like to generate a new

Re: [R] plot cdf

Try this. It will turn off plotting the points, with 186 values, the points are covering up the line. x - runif(186)*10 plot(ecdf(x), do.points=FALSE) ?plot.ecdf # to get help on the plot method used to plot ecdf ?plot.stepfun # to get help on the plot method used to plot stepfun

Re: [R] R matrix help

But there are multiple shapes for matrices with 12 elements -- how did you get 3x4 ? You also could have had 1x12, 2x6, 3x4, 4x3, 6x2,12x1 If you have an R object, you can use dim() on it. [Or perhaps slightly more robustly, NCOL() and NROW()] Michael On Thu, Jun 14, 2012 at 7:51 AM,

Re: [R] Question about sampling

I think you're right -- prob probably isn't quite what you need (at least, directly): constrained sampling like this is a little trickier -- I'll leave this to someone who knows more than me. Michael On Thu, Jun 14, 2012 at 9:07 AM, Guido Leoni guido.le...@gmail.com wrote: Sorry I'm not sure

Re: [R] density plot on a log scale

Would something like ggplot's transparacy option help? Example bascially from http://had.co.nz/ggplot2/geom_point.html # Plot large data set. d - ggplot(diamonds, aes(carat, price)) + geom_point() d # plot large data set with transparancy set to 1/10 th p = ggplot(diamonds, aes(carat, price))

Re: [R] R matrix help

But the meaning of a 3x4 table is rather different than the meaning of a 1x12 table. Regardless, you probably want to start with integer factorization, and can read more about implementations in R here (and elsewhere): http://tolstoy.newcastle.edu.au/R/help/05/01/10007.html Sarah On Thu, Jun

Re: [R] Median line with stripchart

This automates things a bit once we re-organize your data. my.newdata - stack(data.frame(my.data), select=c(Control, Case)) stripchart(values~ind, my.newdata, method = stack, offset=1/3, vertical = TRUE, pch=19) medians - tapply(my.newdata$values, my.newdata$ind, median) points(c(1, 2),

Re: [R] read.table and variable length of tables

On Jun 14, 2012, at 10:23 AM, Halldór Björnsson wrote: Hi, I am trying to read in weather balloon data, where each file has a header of fixed length and a trailing section of a fixed length. The data section (the table) is of variable length. An example of the data is on:

Re: [R] R matrix help

Why would those figues (dim= 3X4, dim=5X4) be the dimensions? Could not they equally be 4X3 an 4X5 or am I completely misunderstanding the question? John Kane Kingston ON Canada -Original Message- From: karthick.laksh...@gmail.com Sent: Thu, 14 Jun 2012 05:51:24 -0700 (PDT) To:

Re: [R] R matrix help

If you have your data in x, you can try something like matrix(x,length(x)/4,4) hth kd 2012.06.14. 14:51 keltezéssel, karthicklakshman írta: Dear R experts, I am interested in getting the dimensions for the matrix dynamically, based on the the number of elements in a matrix for example. if

Re: [R] R matrix help

If the number of elements is 12, the dimensions could be 1x12, 12x1, 2x6, 6x2, 3x4, or 4x3. How did you decide on 3x4? -- David L Carlson Associate Professor of Anthropology Texas AM University College Station, TX 77843-4352 -Original

Re: [R] read.table and variable length of tables

On Jun 14, 2012, at 12:18 PM, Halldór Björnsson wrote: Thanks and with datlines - as.data.frame(inp[( grep(PRE, inp)[1]+5 ):(grep(/ PRE, inp)[1]-1)]); I suggest this instead. read.fwf(textConnection(datlines), widths=rep(7,11)) V1V2V3V4 V5 V6 V7 V8V9 V10

Re: [R] Time difference between two dates/timing

You have been asked before (by me!) to give reproducible examples using dput()... You might need the diff() function. Michael On Thu, Jun 14, 2012 at 5:08 AM, Rantony antony.akk...@ge.com wrote: Hi, Here, i have a matrix like this MyMatrix - *DATETIME        HEADER1            HEADER2*

Re: [R] R matrix help

Can you explain why n=12 should result in 3x4 instead of 2x6 or 6x2 or 4x3 or 1x12 ? On Thu, Jun 14, 2012 at 8:51 AM, karthicklakshman karthick.laksh...@gmail.com wrote: Dear R experts, I am interested in getting the dimensions for the matrix dynamically, based on the the number of elements

Re: [R] R matrix help

What makes you think that with 12 elements the dimensions should be 3x4? It seems that 4x3 would be equally valid. In every use of matrices that I have encountered, the dimensions have been relatable to some known quantity from the problem context, and matrix dimensioning has been an exercise

Re: [R] Question about sampling

Just for make the archives more complete and simplifing the life of the following readers. I think to have solved my problem using the caret packages. In this package there is a function named createData Partition that after defining a column of interest in a data.frame allows to split a dataset

Re: [R] Storing datasets

And I'd like to add, just for the purpose of learning about R ... even if wishes to use the loop version, there appears to be a misunderstanding of R syntax. The expression 1:225*100 does not produce 22500 numbers to put into the matrix, as apparently expected. Compare: 1:3*5 [1] 5 10

Re: [R] Decision Trees or Markov Models for Cost Effectiveness

Hi Noah, I did ask basically the same question about a year ago and there wasn't anything around (http://tolstoy.newcastle.edu.au/R/e14/help/11/06/3651.html) Although I agree that R would be very suitable for this kind of calculations exist. I guess one reason is that a decision tree is not

Re: [R] Time difference between two dates/timing

First thing is to supply data in a usable form See ?dput for one easy way of doing it. In any case, assuming those dates and times are character values something like this should work but not tested on your data. Assuming the data frame is called dtime dtime[,1] - strptime(dtime[,1],

Re: [R] Tukey Kramer with ANOVA (glm)

On Jun 13, 2012, at 7:36 PM, Alaska_Man wrote: Hello, I am performing a BACI analysis with ANOVA using the following glm: I admit I had no idea what a BACI analysis might be. Looking it up it appears to be a cross-over design and my statistical betters have sternly warned me about this

Re: [R] read.table and variable length of tables

On Jun 14, 2012, at 12:18 PM, Halldór Björnsson wrote: Thanks and with datlines - as.data.frame(inp[( grep(PRE, inp)[1]+5 ):(grep(/ PRE, inp)[1]-1)]); Er, ... are you sure? I got a factorized mess when I did that. str(datlines) 'data.frame': 98 obs. of 1 variable: $ inp[(grep(PRE,

Re: [R] matrix manipulation

On Thu, Jun 14, 2012 at 01:11:45PM +, G. Dai wrote: Dear Rlisters, I'm writing to ask how to manipulate a matrix or dataframe in a specific way. To elaborate, let's consider an example. Assume we have the following 3 by 4 matrix A with elements either 0 or 1, 0 1 1 0 1 0 1 1 0

Re: [R] Trouble with .bat files upon installation of 15.0

On 14.06.2012 01:48, Sarah Henderson wrote: Hello to all -- I'm hoping that someone more knowledgeable than me can shed some light on a problem I have been having. In point form: - I am running XP on a 64-bit processor - I run 5 automated R tasks every morning using .bat files and a little

[R] Can someone recommend a package for SNP cluster analysis of Fluidigm microarrays?

I know that there are quite a few packages out that there for cluster analysis. The problem that I am facing is finding a package that will not incorporate all my samples into clusters but just the samples that fit a threshold (that I have not set yet and may need help finding the right level)

[R] readHTMLTable function - unable to find an inherited method ~ for signature NULL

Hi R experts, I have been playing with library(XML) recently and found out that readHTMLTable workls flawlessly for some website, but it does give me an error like below ... Error in function (classes, fdef, mtable) : unable to find an inherited method for function readHTMLTable, for

Re: [R] gsub

Hi, Try this: sub((I)\\((.*?)\\),\\2,t1) [1] (Ithis) test A.K. - Original Message - From: nalluri pratap pratap_s...@yahoo.co.in To: r-help@r-project.org Cc: Sent: Thursday, June 14, 2012 7:03 AM Subject: [R] gsub Hi,   I have a string t1=(Ithis) I(test). I need to get t2=(Ithis)

Re: [R] read.table and variable length of tables

Thanks, even better - Original Message - On Jun 14, 2012, at 12:18 PM, Halldór Björnsson wrote: Thanks and with datlines - as.data.frame(inp[( grep(PRE, inp)[1]+5 ):(grep(/ PRE, inp)[1]-1)]); I suggest this instead. read.fwf(textConnection(datlines), widths=rep(7,11)) V1 V2

Re: [R] separate the sentence after finding a particular word

thanks for reply..I got it...:) On Thu, Jun 14, 2012 at 8:41 PM, Rui Barradas [via R] ml-node+s789695n4633393...@n4.nabble.com wrote: Hello, I don't understand, do you want to output: 1st line: the original input line 2nd line: I want output in following format -- this line 3rd line

Re: [R] read.table and variable length of tables

Thanks and with datlines - as.data.frame(inp[( grep(PRE, inp)[1]+5 ):(grep(/PRE, inp)[1]-1)]); I get the data as needed. Thanks again H. - Original Message - On Jun 14, 2012, at 10:23 AM, Halldór Björnsson wrote: Hi, I am trying to read in weather balloon data, where each file

Re: [R] Process XML files

Dear Rxperts, I am back to favoRite! I would need your favoR, please! Is there a way to use read format arguments for POSIXct or strptime from the xml file without specifying format=... in these functions? The format of data-time values are present in the xml file as shown below. Please see

Re: [R] need help

Hi Carlos, Thanks for your suggestions.  I saw Rui's reply about the same problem using rle.  It looks very solid.  I was trying replicate the same thing with gsub, but it was not working in that way. For example,  txt1-my name name name is micky  gsub(\\b(\\w+)\\b(\\s+)\\1\\2,,txt1) [1]

Re: [R] question about creating data frame

Below are two equivalent solutions. study_df - data.frame(course = c(rep('Mathematics', 80 + 15), rep('Physics', 32 + 24), rep('Biology', 18 + 29)), A = c(rep(1, 80), rep(0, 15),

Re: [R] save to Rdata file and to txt

Though not exactly what you asked for, I find the output of dput() to be useful dput(moransl, file = moransl.txt) results in list(Moran.I.First, structure(list(observed = 0.06988288, expected = -0.03225806, sd = 0.02513276, p.value = 4.822722e-05), .Names = c(observed, expected, sd,

Re: [R] how to export output

thanks a alot !!! I got it :) On Thu, Jun 14, 2012 at 8:07 PM, Rui Barradas [via R] ml-node+s789695n463338...@n4.nabble.com wrote: Hello, Try sink(sentiment.txt) classify_polarity(...etc...) sink() If this doesn't do it see ?capture.output Hope this helps, Rui Barradas Em

Re: [R] Can someone recommend a package for SNP cluster analysis of Fluidigm microarrays?

I do think this is more of a Bioconductor question -- but no worries, they're all much nicer there than we are here and won't flame you if you double post :-) Best, Michael On Thu, Jun 14, 2012 at 12:37 PM, Hans Thompson hans.thomps...@gmail.com wrote: I know that there are quite a few packages

Re: [R] matrix manipulation

thank you, Petr. This is exactly what I'm looking for in my post. An related question can be how to get an arbitrary weight, say if row1 and row 2 have 1 common value 1, then assign a weight 10, if row 1 and row 2 have 2 common value 1, then assign a weight 12. I'm not so sure how to expand your

Re: [R] readHTMLTable function - unable to find an inherited method ~ for signature NULL

The second page (mmo-champion.com) doesn't contain a table node. To scrape the data from the page, you will have to explore its HTML structure. D. On 6/14/12 9:31 AM, Moon Eunyoung wrote: Hi R experts, I have been playing with library(XML) recently and found out that readHTMLTable

Re: [R] matrix manipulation

On Thu, Jun 14, 2012 at 02:24:20PM -0400, cowboy wrote: thank you, Petr. This is exactly what I'm looking for in my post. An related question can be how to get an arbitrary weight, say if row1 and row 2 have 1 common value 1, then assign a weight 10, if row 1 and row 2 have 2 common value 1,

Re: [R] Time difference between two dates/timing

Hi, If you need the difference between two dates from the dataset, Try this:  dat1-data.frame(DATETIME=c(1/1/2010 0:10,1/1/2010 0:20,1/1/2010 0:30),HEADER1=c(197.19,203.88,206.56),HEADER2=c(100.08,100.10,100.04))  dat1$DATETIME-strptime(dat1$DATETIME, %d/%m/%Y %H:%M)  

[R] cointegration, changing time span, incorrect results

I just tried to figure out why R does not calculate the same johansen test statistics as eviews does: I imported data: sy=read.csv(sy.csv,sep=;,header=TRUE) si=read.csv(si.csv,sep=;,header=TRUE) merged them. swe=merge.zoo(si,sy) when i test swe for cointegration with the johansen test, i get

Re: [R] cointegration, changing time span, incorrect results

problem solved. if one adjusts in r the time span the way i did it, r really only has data available for this time span. to the opposite in eviews. if one sets in eviews a time span via adjusting the sample size, it still uses the observations outside the sample size i.e. in cointegrationn tests

[R] Rootogram for flexmix function

Hi I use the flexmix function for clustering. when i give the command plot(flexmixobjext) , it gives the rootogram plot can anyone help me to understand the plot - Thanks in Advance Arun -- View this message in context:

Re: [R] Median line with stripchart

Thank you! This works much better. Best regards, Luigi -Original Message- From: David L Carlson [mailto:dcarl...@tamu.edu] Sent: 14 June 2012 16:44 To: 'Luigi' Cc: r-help@r-project.org Subject: RE: [R] Median line with stripchart This automates things a bit once we re-organize your

[R] Query about TSRV

Hi All, This question may not belong here, but I asked this on the R-SIG-FINANCE list and so far have not got any reply, so was hoping someone here may help. I have a basic query about TSRV and was hoping you all can shed some light on the issue. I have 22500 records for each day. So if I take

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