Hi Jim
Without going to the histogram function to study it in detail it appears
when there is density used in the histogram function the data has to be in
the original scale to to send to the panel function.
As you example is not reproducible use the singer data to get the ylimits
for the hist
Hi all I had made a package in R-3.0.3 , and its running well ,
my issue is it is not running in other versions or R like
R-3.0.2/3.0.1 it is showing error like ---
Error: This is R 3.0.2, package âxxxâ needs >= 3.0.3
Does anybody have the solution on how to ma
Hi
".." is the parent directory whereas "." is the current directory, so you
probably want
list.files(path = "./Least Developed Countries")
instead of
list.files(path = "../Least Developed Countries")
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant
1. Firstly your library should be in user space. Don't use the one in
C:\Program Files\... . That is the case not only for bc but for other
packages too. Reinstall R and the first time you install a package it
should ask you to allow it to create a user library. Be sure you
allow that.
2. As i
Gabor,
Can you confirm that the bc function is supposed to be current.
The bc package works with my Mac, but not with Windows.
I keep getting the message
Error in system(cmd, input = input, intern = TRUE) : -l
The FAQ on your https://code.google.com/p/r-bc/ page didn't get me past that
problem.
On Mon, May 5, 2014 at 10:16 PM, David Winsemius wrote:
>
> On May 5, 2014, at 6:05 PM, Gabor Grothendieck wrote:
>
>> On Mon, May 5, 2014 at 9:43 AM, Niloofar.Javanrouh
>> wrote:
>>>
>>>
>>> hello,
>>> i want to differentiate of L with respect to b
>>> when:
>>>
>>> L= k*ln (k/(k+mu)) + sum(y) *
On May 5, 2014, at 6:05 PM, Gabor Grothendieck wrote:
> On Mon, May 5, 2014 at 9:43 AM, Niloofar.Javanrouh
> wrote:
>>
>>
>> hello,
>> i want to differentiate of L with respect to b
>> when:
>>
>> L= k*ln (k/(k+mu)) + sum(y) * ln (1-(k/mu+k)) #(negative binomial ln
>> likelihood)
>> and
>>
On Mon, May 5, 2014 at 9:43 AM, Niloofar.Javanrouh
wrote:
>
>
> hello,
> i want to differentiate of L with respect to b
> when:
>
> L= k*ln (k/(k+mu)) + sum(y) * ln (1-(k/mu+k)) #(negative binomial ln
> likelihood)
> and
> ln(mu/(mu+k)) = a+bx #link function
>
> how can i do it in R?
Try th
On 5/5/2014 3:42 PM, William Dunlap wrote:
Have you looked at the width.cutoff and nlines arguments to deparse?
width.cutoff controls how long a line can be and it quits producing
output (saving time and space) after nlines of output are produced.
You want essentially the following
f0 <- func
On Fri, May 2, 2014 at 5:23 PM, Dr Eberhard Lisse wrote:
> Hi,
>
> How do I do something like this without using sqldf?
>
> a <- sqldf("SELECT COUNT(*) FROM b WHERE c = 'd'")
>
> or
>
> e <- sqldf("SELECT f, COUNT(*) FROM b GROUP BY f ORDER BY f")
>
In the examples section at the bottom of ?sqldf
Have you looked at the width.cutoff and nlines arguments to deparse?
width.cutoff controls how long a line can be and it quits producing
output (saving time and space) after nlines of output are produced.
You want essentially the following
f0 <- function(x, maxChar=20) deparse(x, width.cutoff=ma
On 05/06/2014 05:02 AM, Roopa Subbaiaih wrote:
Hello,
I am trying to plot bargraphs susing Sciplot. Is there a way to increase
the width of the bar graphs and decrease the space b/n the groups? I am
pasting the script as well as attaching the graph.
Bio6<- read.csv("Data/Plin1.csv",na.strings="
Is there a standard or or a standard utility to limit the size of
deparse(substitute(.))?
Below please find an example of the problem plus one solution.
If another solution already exists, I might prefer to use it.
Thanks,
Spencer
##
## Problem
##
deparse.x0 <-
On May 5, 2014, at 11:44 AM, Dr Eberhard Lisse wrote:
> I do not wish to prolong this metadiscussion but I remain confused
> by your advice:
>
> 1) You don't understand what I asked (ie would have to parse two
> simple SQL statements)
Correct ... at least for me. I could have guessed at what th
Dear William,
Worded beautifully. Yes, I wanted to get the tick marks at the left corner.
I had to just add xaxs="i" and yaxs="i"
Thanks
Ahmed
Ahmed M. Attia
Research Assistant
Dept. of Soil&Crop Sciences
Texas A&M University
ahmed.at...@ag.tamu.edu
Cell phone: 001-979-248-5215
FAX: 001-308
If 'foo' is a subdirectory of the current working directory, then
list.files('foo')
lists the files in foo.
".." goes up one level
But you did not want to go up one level. You wanted to stay at the same
level.
(also, '...' has no meaning in pathnames)
Try either of
list.files(path = "./Least
On 5/5/2014 1:19 PM, Duncan Murdoch wrote:
On 05/05/2014, 3:39 PM, Spencer Graves wrote:
Is there a function someplace to compare lengths?
For example, if "longer object length is not a multiple of
shorter object length", "a/b" issues a warning. I'd like something with
more fl
Dear list members,
I would like to access a subdirectory given where the work directory has
been set. So I have:
> getwd()
[1] "C:/Users/Lord Adellus/Dropbox/I8child1/Data"
> list.files() # give three folders
[1] "Least Developed Countries"
[4] "Low middle income group
Dear All
I've fitted a GAMM to relate water temperature to the day of the year (DOY) at
three different sites. I used summary(MFinal$gam) and anova(MFinal$gam) to
produce the output of my model. I'm confused on how to report the degrees of
freedom for the smother and the factor. I currently ha
Hello,
I am trying to plot bargraphs susing Sciplot. Is there a way to increase
the width of the bar graphs and decrease the space b/n the groups? I am
pasting the script as well as attaching the graph.
Bio6 <- read.csv("Data/Plin1.csv",na.strings="",header=T)
attach(Bio6)
head(Bio6)
par(family="
Hello,
This may seem like a simple problem, but it's frustrating me immensely. I'm
trying to overlay a normal curve (dnorm) on top of a histogram using the
code below. This works find when the type = "density", but the person for
whom I'm making the plot wants the y axis in percent of total rath
hello,
i want to differentiate of L with respect to b
when:
L= k*ln (k/(k+mu)) + sum(y) * ln (1-(k/mu+k)) #(negative binomial ln
likelihood)
and
ln(mu/(mu+k)) = a+bx #link function
how can i do it in R?
thank you.
_
Best Regards
Niloofar.Javanrouh
Ph.D Student of Bi
On 05/05/2014, 3:39 PM, Spencer Graves wrote:
Is there a function someplace to compare lengths?
For example, if "longer object length is not a multiple of
shorter object length", "a/b" issues a warning. I'd like something with
more flexibility in what is reported.
Had
Is there a function someplace to compare lengths?
For example, if "longer object length is not a multiple of
shorter object length", "a/b" issues a warning. I'd like something with
more flexibility in what is reported.
Hadley Wickham's "testthat" and "assertthat" packages
I don't understand your question - you want a tick mark at 0,0 but you
explicitly ask for the y axis to start at 100 (and to go upwards from
there). Do you mean you want the initial tick mark on an axis to be
at the lower left corner of the plot? If so, see if adding xaxs="i",
yaxs="i" to your p
I didn't find an attached XML file. Maybe the list removes attachments?
You might try posting to StackOverflow.com if this is the case.
On Fri, May 2, 2014 at 2:17 PM, starcraz wrote:
> Hi all - I am trying to parse out the attached XML file into a data frame.
> The file is extracted from Had
Dear R usres,
Sorry to bother you with my basic question. I have a quick question about
tick mark in R. A reviewer wants the tick marks of the graph to start at
0:0 point. My current code below produces the tick mark a little far from
the corner;
plot(Simu2~Irrig, data=Ahmed,pch=17, col=1,subset=
Just guessing, but something like
pars <- numeric(nloops)
for (i in 1:nloops) {
## use auglag
pars[i] <- {the $par part of the answer}
}
might be what you're looking for.
All of which has nothing to do with auglag in particular, just simple R
programming.
-Don
--
Don MacQueen
Lawren
While I don't particularly like the idea of a package automatically
making changes to the system, you can use
installed.packages()
to see which of your needed packages are already available, and only
install the ones that are missing.
Better would be to put the whole list in Depends, and let R m
Hi all ,
I have a GUI package function like below ,
trader<-function()
{
install.packages("Rgtk2")
install.packages("cluster")
install.packages("gWidgets")
install.packages("gWidgetsRGtk2")
install.packages("scales")
install.packages("RGtk2Extras")
install.packages("Fuzz
Dear R-community,
I am totally lost and need help.
For a Visualization I need to plot two regressions in the same plot. The
intention is to provide a visual basis for a synthesized theoretical
discussion.
1.)fixed.1<-plm(CSmean~ FCRlong, data = data.plm, index =
c("countrynr","quartal")
... or this could mean to accept or reject an edge with p = 0.01 or 0.1 in
which case you *might* use rbinom() as in
n <- 100 # number of edges
p <- 0.27 # desired probability
rbinom(n,1,p)
[1] 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 ... etc.
B.
On 2014-05-05, at 5:19 AM, Rolf Turner wrote:
Dear R and vegan package users,
I have been experiencing problems with the metaMDS function when working on a
dataset (euk) consisting of 9 "sites" (RNA extracts of 9 biofilms samples) and
340 "species" (microbial taxa based on rRNA sequences). The problem is that I
get nMDS ordinations with ov
Please keep responses on-list unless there are compelling reasons not to.
It is still not clear what you want to do. You *might* want to assign
probabilities to the edges of a graph where these probabilities are
uniformly (and independently) distributed on the interval [0.01, 0.10].
This co
That paper you cite is about Social networks. You may want to use
igraph or sna packages
On 5 May 2014 10:54, Ragia Ibrahim wrote:
> thanks for replying
>
> in the following paper
> http://www.cs.cornell.edu/home/kleinber/kdd03-inf.pdf
> page 6 third paragraph
>
>
> the author writes:
> "assi
On 05/05/2014, 1:02 AM, Spencer Graves wrote:
Is there a standard function to generate messages like "longer
object length is not a multiple of shorter object length" but providing
more information like the names of the objects?
No, not really.
At the C level objects don't really have
WTF?
Is that a R package from you?
On 5 May 2014 09:27, Rolf Turner wrote:
> On 05/05/14 17:05, Ragia Ibrahim wrote:
>>
>>
>> Dear group,
>> How to generate uniform probability choosing p to be 2% and 5%, in
>> separate trials for 100 times.
>
>
> No idea WTF you are talking about. Can you f
Hi,
I want to compare DESeq vs DESeq2 and I am getting different number of DEGs
which I will expect to be normal. However, when I compare the 149 genes ID
that I get with DESeq with the 869 from DESeq2 there are only ~10 genes
that are in common which I donât understand (using FDR <0.05 for bot
Maybe you thought the binomial distribution?
see
?rbinom
best,
kd
Feladó: r-help-boun...@r-project.org [r-help-boun...@r-project.org] ;
meghatalmazó: Rolf Turner [r.tur...@auckland.ac.nz]
Küldve: 2014. május 5. 9:27
To: Ragia Ibrahim
Cc: r-help@r-project.
On 05/05/14 17:05, Ragia Ibrahim wrote:
Dear group,
How to generate uniform probability choosing p to be 2% and 5%, in separate
trials for 100 times.
No idea WTF you are talking about. Can you formulate a question that is
comprehensible to the human mind?
cheers,
Rolf Turner
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