[R] Lavaan

2015-06-23 Thread DzR
Dear Senior users of R/R Studio, I am very new to this environment hence am unable to plot the SEM models including use of graphic package ggplot. Request for some help in getting the plots please. Thanks, - Deva __ R-help@r-project.org mailing

Re: [R] Lavaan

2015-06-23 Thread Sarah Goslee
Hi, There are various tutorials for lavaan online, and even an entire book on the R package. Have you worked through those examples and tutorials successfully? If so, a clearer description of what you've tried and what failed is required to be able to help you. Without a reproducible example

Re: [R] sampling rows with values never sampled before

2015-06-23 Thread Jon Skoien
If df is the data.frame with values and you want nn samples, then this is a slightly different approach: # example data.frame: df = data.frame(a1 = sample(1:20,50, replace = TRUE), a2 = sample(seq(0.1,10,length.out = 30),50, replace = TRUE),

Re: [R] repeated measures: multiple comparisons with pairwise.t.test and multcomp disagree

2015-06-23 Thread Bert Gunter
Yours is (primarily) a statistical question, not a question about R, and so off topic here. Post on a statistics list, like stats.stackexchange.com instead. Better yet, consult a local statistician. This is a thorny and difficult matter and, as you have already discovered, is full of sound and

[R] Usage of vcd packages.

2015-06-23 Thread My List
All, I am new to the vcd package and new to R too. 1) I have a lickert analysis based data set. 2) I am doing a hypothesis tests on the variables ( like, is there a relationship between the choice of a Doctor based on the Patients Income , that's just one example) 3) I am building contingency

Re: [R] repeated measures: multiple comparisons with pairwise.t.test and multcomp disagree

2015-06-23 Thread Thierry Onkelinx
Dear Denis, It's not multcomp which is too conservative, it is the pairwise t-test which is too liberal. The pairwise t-test doesn't take the random effect of Case into account. Best regards, ir. Thierry Onkelinx Instituut voor natuur- en bosonderzoek / Research Institute for Nature and Forest

[R] set par options once for entire R session

2015-06-23 Thread Martin Batholdy via R-help
Hi, I would like to set plot-options via par() and keep them for all plots that are created thereafter. Currently after each plot device the parameters I can set with par() are reseted to their default value, at least on a Mac (R 3.2.1). Is there a way to define the parameters for plotting

Re: [R] Lavaan

2015-06-23 Thread deva d
i am attaching a .csv file, and the associated code worked out in R Studio. i used the lavaan and sem packages, and conducted it. now, i wish to draw the SEM model, as is available in AMOS other packages and how does one draw the covariance arrows in R. ONE STATISTICS oriented question - how

[R] time management graph

2015-06-23 Thread PIKAL Petr
Dear all Did anybody tried to do time management graphs in R? I could do some aggregation xtabs(duration~person+Typ, data=temp) but I would like to make also a graph to show which task (Typ) and when was done by which person. The closest I came till this evening is following graph, but it is

[R] ANOVA for multiple repeated measurements

2015-06-23 Thread Thomas Evangelidis
​Greetings, My dataset consist of the following columns: Specimen C_flex C_rigid tau_flextau_rigidR_flex R_rigid1 0.1782 0.29750.3290 0.3223 0.4338 0.51002 0.0527 0.10970.1780 0.1038 0.2364 0.1086. where C, tau and R are

Re: [R] set par options once for entire R session

2015-06-23 Thread Bert Gunter
Martin: One simple approach: write your own graphics functions that are simple wrappers to the plot functions you use that set the par() values as you wish. You could even put them in a package that is loaded at startup. See ?Startup My understanding is that so long as a graphics device remains

[R] 3D point cloud fitting

2015-06-23 Thread Guillaume Kautzmann
Hi all, Hopefully I post that correctly as I use r-help for the first time. I wish to best-fit a 3D point cloud on another one, preferably with a least-square adjustement method. Is there any existing solution (package, function,...) available? Here is a sample of my data where I want to fit the

Re: [R] Copula package - normalCopula() param order

2015-06-23 Thread Dominique Katshunga
Dear all, In an attempt to generate a sample of observations from a four dimensional copula from the package Copula, I got the following warning message and all the observations are NA's: Warning messages: 1: In rmvnorm(n, sigma = getSigma(copula)) : sigma is numerically not positive definite

Re: [R] issue in running timeseries forecasting related package

2015-06-23 Thread PIKAL Petr
Hi It is weird. Maybe others could come with some sensible answer. I would try to start R with -vanilla switch Rgui.exe --vanilla and try if everything is OK. If yes, you could start loading packages and see how all is working. If not I think that the only option is reinstaling R and

[R] numeric of length 1

2015-06-23 Thread Ragia Ibrahim
Dear group, I have the following object pr_sub$vector[1] 14 0.07782809 class( pr_sub$vector[1]) [1] numeric length( pr_sub$vector[1]) [1] 1 how can I separate pr_sub$vector[1] and get 14 only thanks in advance Ragia

Re: [R] numeric of length 1

2015-06-23 Thread Gerrit Eichner
Hi, Ragia, use names( pr_sub$vector[ 1]) Regards -- Gerrit On Tue, 23 Jun 2015, Ragia Ibrahim wrote: Dear group, I have the following object pr_sub$vector[1] 14 0.07782809 class( pr_sub$vector[1]) [1] numeric length( pr_sub$vector[1]) [1] 1 how can I separate

Re: [R] 3D point cloud fitting

2015-06-23 Thread Jeff Newmiller
Your question seems unclear, and you posted using HTML which makes things even less clear (see the Posting Guide). Sharing data on the making list is much more effective using the dput function as described in [1]. I note that your X values are very different, but your Y and Z values are

Re: [R] Call to a function

2015-06-23 Thread Bert Gunter
?with e.g. with(mydata,aaa(v1)) -- Bert Bert Gunter Data is not information. Information is not knowledge. And knowledge is certainly not wisdom. -- Clifford Stoll On Tue, Jun 23, 2015 at 2:39 PM, Steven Yen sye...@gmail.com wrote: Dear Members I have a data frame as generated below. I

Re: [R] Call to a function

2015-06-23 Thread Steve Taylor
Note that objects can have more than one class, in which case your == and %in% might not work as expected. Better to use inherits(). cheers, Steve -Original Message- From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Steven Yen Sent: Wednesday, 24 June 2015 11:37a

[R] Repeated Measures ANOVA and the Bonferroni post hoc test different results of significantly

2015-06-23 Thread gianni lavaredo
Hi All and thanks for Help I am doing an Repeated Measures ANOVA and the Bonferroni post hoc test for my data using R project. The ANOVA gives a significantly difference between the data but not the Bonferroni post hoc test. anova(aov2) numDF denDF F-value p-value

Re: [R] Call to a function

2015-06-23 Thread Steven Yen
Thanks! From this I learn the much needed class statement if (class(wt)==character) wt - x[, wt] which serves my need in a bigger project. Steven Yen On 6/23/2015 6:20 PM, boB Rudis wrote: You can do something like: aaa - function(data, w=w) { if (class(w) %in% c(integer, numeric,

Re: [R] Call to a function

2015-06-23 Thread boB Rudis
You can do something like: aaa - function(data, w=w) { if (class(w) %in% c(integer, numeric, double)) { out - mean(w) } else { out - mean(data[, w]) } return(out) } (there are some typos in your function you may want to double check, too) On Tue, Jun 23, 2015 at 5:39 PM, Steven

[R] Call to a function

2015-06-23 Thread Steven Yen
Dear Members I have a data frame as generated below. I like to be able to call a function both with a vector and a vector (mydata$v1) in that data frame (v1). The first call works, but the second does not. Can someone help me with the second call? Thanks!! ---