Re: [R] running Rmpi with SGE on a cluster

2018-07-01 Thread Loris Bennett
David Winsemius writes: >> On Jul 1, 2018, at 6:32 AM, Jeremie Juste wrote: >> >> >> Hello, >> >> I would like to know how to use Rmpi on a cluster but usually the >> workflow of the cluster uses sun grid engine to launch jobs. >> >> I found this reference on the web >>

Re: [R] Convert list of data frames to one data frame

2018-07-01 Thread Ira Sharenow via R-help
My final post for thisthread! Since I first asked myquestion on Stack Overflow, I posted all the solutions along with my timingstudy there. https://stackoverflow.com/questions/50807970/converting-a-list-of-data-frames-not-a-simple-rbind-second-row-to-new-columns/51129202#51129202 Thanks

Re: [ESS] Problem starting specific R version

2018-07-01 Thread Alex Branham via ESS-help
Hi Henric - Thanks. I forgot how Windows handles different R versions. I've pushed a commit to my personal branch that I think fixes this. I did it on a separate branch that contains some other work though so the line numbers won't match up with what you have.

Re: [R] parallel processing in r...

2018-07-01 Thread Christofer Bogaso
Hi, On ' how to use "top" inside the R prompt? ' you can use system('top') command. Thanks, On Sun, Jul 1, 2018 at 9:53 PM Benoit Vaillant wrote: > Hello, > > On Sun, Jul 01, 2018 at 11:31:29AM +, akshay kulkarni wrote: > > I tried "top" at the bash prompt, but it provides a way to

Re: [R] parallel processing in r...

2018-07-01 Thread Benoit Vaillant
Hello, On Sun, Jul 01, 2018 at 11:31:29AM +, akshay kulkarni wrote: > I tried "top" at the bash prompt, but it provides a way to measure > CPU performance of the existing processes. I want to check the CPU > usage of the execution of an R function. Try to open two bash prompts, in one use R

Re: [R] running Rmpi with SGE on a cluster

2018-07-01 Thread David Winsemius
> On Jul 1, 2018, at 6:32 AM, Jeremie Juste wrote: > > > Hello, > > I would like to know how to use Rmpi on a cluster but usually the > workflow of the cluster uses sun grid engine to launch jobs. > > I found this reference on the web > http://borisv.lk.net/howtos/grid-mpi-r-howto.html. >

Re: [R] A question on Statistics

2018-07-01 Thread Christofer Bogaso
I derive posting guide from https://www.r-project.org/posting-guide.html I am imagining a distribution where mean is zero but there are few large observations in the positive side which are not very frequent. On Sun, Jul 1, 2018 at 8:29 PM Bert Gunter wrote: > From the posting guide: > >

Re: [R] A question on Statistics

2018-07-01 Thread Bert Gunter
>From the posting guide: "*R-help* is intended to be comprehensible to people who want to use R to solve problems but who are not necessarily interested in or knowledgeable about programming." This says to me that R-help is for general questions about R programming, not statistics, though I

Re: [ESS] Problem starting specific R version

2018-07-01 Thread Henric Winell via ESS-help
Hi Alex, On 2018-07-01 15:51, Alex Branham wrote: Thanks. I think the solution is to change "car" to "cdr" in ess-r-define-runners in ess-r-mode.el. It's hard for me to test this, though, since I don't have a windows machine. IIUC, you'd like to change 'car' to 'cdr' on L733:

[R] running Rmpi with SGE on a cluster

2018-07-01 Thread Jeremie Juste
Hello, I would like to know how to use Rmpi on a cluster but usually the workflow of the cluster uses sun grid engine to launch jobs. I found this reference on the web http://borisv.lk.net/howtos/grid-mpi-r-howto.html. But I could not even reproduce that example some errors with > n.cores <-

Re: [ESS] Problem starting specific R version

2018-07-01 Thread Henric Winell via ESS-help
Hi Alex, On 2018-07-01 14:03, Alex Branham wrote: Thanks for the report. Thanks for the swift reply and interest in this matter. Can you let me know the exact name of those two programs, including the full path (e.g. C:\\Program Files\R\R-3.5\R.exe or whatever)? And the Under 64-bit

Re: [R] A question on Statistics

2018-07-01 Thread Christofer Bogaso
Hi, I could post in StackExchange for sure, however I dont think R-help posting guide discourage asking a question about Statistics, atleast formally. I could further clarify if my question is not elaborate enough. And many apologies if it is very trivial - however still I am looking for 2nd

[ESS] Problem starting specific R version

2018-07-01 Thread Henric Winell via ESS-help
Hi, I'd like to report the following, which I suspect is a bug: On my Windows 10 system using Emacs 25.3.1 I've got several R versions. For example, I've got R-3.5.0 and R-devel installed under C:\Program Files\R\R-3.5 and C:\Program Files\R\R-3.6, respectively. Up until quite recently, I

Re: [R] parallel processing in r...

2018-07-01 Thread akshay kulkarni
dear Members, Thanks for the reply..I do have another issue; I will be highly obliged if you answer it: I tried "top" at the bash prompt, but it provides a way to measure CPU performance of the existing processes. I want to check the CPU usage of the