Re: [R] Problem launching Rcmdr

2020-03-11 Thread Brian Grossman
I did some testing and was able to run the tcltk commands without any problems. It brought up the graph normally when I hit the submit button and when I changed the values and hit submit it would change the graph accordingly.The interesting thing is that after the tkdestroy(tt) command I tried

Re: [R] how do I add text lables on QQ plot

2020-03-11 Thread David Winsemius
On 3/10/20 9:51 PM, Ana Marija wrote: Hello, I am making QQ plot via: library(ggman) qq(fdr2_sorted$FDR.q.val2, main = "RG_All", pch = 17, col=fdr1_sorted$group, cex = 1, las = 1) I think you may be confusing the audience. There is no qq function in the ggman package. There is however a

Re: [R] how do I add text lables on QQ plot

2020-03-11 Thread Ana Marija
I don’t need to use qqman package... if someone has any other solution would be the most appreciated On Wed, 11 Mar 2020 at 20:28, John Kane wrote: > No idua how it works but the name suggests it in out of the Hadley > universe and not basic graphics. > > On Wed, 11 Mar 2020 at 21:14, Abby

Re: [R] Problem launching Rcmdr

2020-03-11 Thread Fox, John
Dear Brian, I'm afraid that I have no idea about what's going on, particularly why your second attempt to start the Rcmdr works, whether after a first attempt, or now after using tcltk. Did you follow up on Peter's suggestion that your antivirus software may be the source of the problem?

Re: [R] power for repeated measures ANCOVA

2020-03-11 Thread Bert Gunter
You should probably post this on a statistics site like stats.stackexchange.com. I suspect the answer is something like "are you serious?!," because I presume any such analysis would have to specify a complex VCOV matrix with many parameters that would have to be pulled more or less out of thin

Re: [R] how do I add text lables on QQ plot

2020-03-11 Thread John Kane
No idua how it works but the name suggests it in out of the Hadley universe and not basic graphics. On Wed, 11 Mar 2020 at 21:14, Abby Spurdle wrote: > One more thing, I can't find a CRAN package named "ggman". > > On Thu, Mar 12, 2020 at 1:59 PM Abby Spurdle wrote: > > > > Ok, then. > > > >

Re: [R] how do I add text lables on QQ plot

2020-03-11 Thread Abby Spurdle
One more thing, I can't find a CRAN package named "ggman". On Thu, Mar 12, 2020 at 1:59 PM Abby Spurdle wrote: > > Ok, then. > > What graphics system is the qq function using? > Assuming that it's using the base graphics system, look at the > graphics::text function. > > text (1:10, 1:10,

Re: [R] how do I add text lables on QQ plot

2020-03-11 Thread Abby Spurdle
Ok, then. What graphics system is the qq function using? Assuming that it's using the base graphics system, look at the graphics::text function. text (1:10, 1:10, LETTERS [1:10]) If it's a different graphics system, then I don't know, but hopefully someone else will help. On Thu, Mar 12, 2020

Re: [R] how do I add text lables on QQ plot

2020-03-11 Thread Ana Marija
Thanks for getting back to me but I would need this text labels added in this particular instance On Wed, 11 Mar 2020 at 19:37, Abby Spurdle wrote: > > and I would like to get the plot like the one in attach. > > Please advise, > > This is a bad idea. > Plots should be *easy* to interpret. > >

Re: [R] how do I add text lables on QQ plot

2020-03-11 Thread Abby Spurdle
> and I would like to get the plot like the one in attach. > Please advise, This is a bad idea. Plots should be *easy* to interpret. Try to keep plots relatively simple, avoiding unnecessary details. For nontrivial plots, use a caption to describe the main features of the plot. (That's where

Re: [R] power for repeated measures ANCOVA

2020-03-11 Thread Abby Spurdle
I don't know the answer to your question. But I was wondering if "repeated measures ANCOVA" could fall under other headings? If you search for R>, substituting , maybe you'll get lucky. On Wed, Mar 11, 2020 at 6:42 AM Debbie Hahs-Vaughn < debbie.hahs-vau...@ucf.edu> wrote: > Is anyone aware of

Re: [R] Problem launching Rcmdr

2020-03-11 Thread Fox, John
Dear Bernhard, Peter, and Brian, Thanks, Peter, for the suggestion. If you're right then the problem is with tcltk more generally and not directly with the Rcmdr package. Brian: That's easily checked and might clarify what's going on: Load the tcltk package via library(tcltk), and then try the

Re: [R] Installing Packages

2020-03-11 Thread Duncan Murdoch
On 11/03/2020 7:46 a.m., Jeff Reichman wrote: R-Help Recently I've started receiving the following message when updating packages - "Do you want to install from sources the packages which need compilation." I generally click "Yes," but what is this asking me. That is it appears to be

Re: [R] Installing Packages

2020-03-11 Thread Jeff Newmiller
Because pre-compiled (binary) versions of packages are getting built slower than the introduction of new versions of the packages are getting approved. On March 11, 2020 7:46:22 AM PDT, Jeff Reichman wrote: >R-Help > > > >Recently I've started receiving the following message when updating

Re: [R] Installing Packages

2020-03-11 Thread Wang Jiefei
Hi, This means that the package you were trying to install does not have a compiled version stored on the server. Sometimes you would not see the question because the server has compiled the package for you, but sometimes it doesn't. Cheers, Jiefei On Wed, Mar 11, 2020 at 10:46 AM Jeff

[R] Installing Packages

2020-03-11 Thread Jeff Reichman
R-Help Recently I've started receiving the following message when updating packages - "Do you want to install from sources the packages which need compilation." I generally click "Yes," but what is this asking me. That is it appears to be re-compiling certain packages? Why? RStudio

Re: [R] Problem launching Rcmdr

2020-03-11 Thread Pfaff, Bernhard Dr.
Good catch, Peter; Cylance might be the culprit - at least I encountered problems by compiling C++ sources and/or building packages with interfaced routines and here a memory checker kicked in. Maybe something akin is happening by launching Rcmdr (tcl/tk)? -Ursprüngliche Nachricht- Von:

Re: [R] Problem launching Rcmdr

2020-03-11 Thread Peter Dalgaard
Any chance that a virus checker is interfering? -pd > On 10 Mar 2020, at 23:43 , Fox, John wrote: > > Dear Brian, > > (Please keep r-help in the loop so that if someone else has this problem > they'll have something to refer to.) > > Your session at start-up seems completely clean, so I'm