Hi Mrs Ms R,
A simple maths question that I am trying to resolve with R: I need to
calculate the SE from a pvalue and it's beta... How to do this...?
Thank you very much and best regards!
Georg Ehret, Geneva, Switzerland.
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of the values of the
variables. I had done this with simple bargraphs for 6 datapoints in the
past, but for 30 this is too much. Anyone a good idea how to get this job
nicely done?
Thanking you and best regards, Georg.
##
Georg Ehret
Johns Hopkins Baltimore
.
**
Georg Ehret
Johns Hopkins
Baltimore
On Sat, Jun 5, 2010 at 12:00 PM, Jim Lemon j...@bitwrit.com.au wrote:
On 06/05/2010 07:35 AM, Georg Ehret wrote:
Dear R community,
I am working on a dataset that has median 0 (due to many 0
entries)
for my principal variable of interest
Dear R community,
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and provide commented,
). Conventional scatterplots
are neither. Is there a good way to do this (e.g. plotting the 0 values
with a jitter or something else...)?
Thanking you all and best regards, Georg.
*
Georg Ehret
Johns Hopkins
Baltimore
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?
Thank you very much and best regards, Georg.
Georg Ehret, JHU, Baltimore
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PLEASE do read the posting guide
many different
objects, but the pasting together did not work and this simple example does
not neither...]
Thank you and best regards, Georg.
***
Georg Ehret
JHU
Baltimore
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to out. Although
improved, this is still very slow... Can someone please help me and suggest
how I can make this faster?
Thank you and best regards, Georg.
***
Georg Ehret, Johns Hopkins U, Baltimore MD, USA
for (i in 16:nmax){
line-scan(file=paste(file
thing is terribly slow... I observed that it's faster when
breaking down the file. But other suggestions could you please make to make
it run faster (say days instead of weeks).
Thank you and best regards, Georg.
*
Georg Ehret, Johns Hopkins Medicine
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?
Thank you and best regards, Georg.
*
Georg Ehret
Johns Hopkins University
Institute of Genetic Medicine
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Dear Miss R,
I have a large dataset that is skewed and would like to calculate
confidence intervals for my regression line. Unfortunately I have trouble
finding commands for rubust regression and in particular for the confidence
intervals... Can you possibly give a hint?
Thank you and best
.
***
Georg Ehret
Geneva University Hospital
Geneva, Switzerland
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...?
Thanking you and wishing you all an excellent Sunday!
Cheers, Georg.
*
Georg Ehret
Geneva University Hospital
Switzerland
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Dear R community,
I am trying to assign a new variable (named new) to multiple dataframes
by a loop and do not succeed... Can you please help?
Thank you and best regards, Georg Ehret.
c
V1 V2 V3 V4 V5 V6 V7 V8 V9 V10
1 1 11 21 31 41 51 61 71 81 91
2 2 12 22 32 42 52 62 72 82 92
3 3
5 5 15 25 35 45 55 65 75 85 95
6 6 16 26 36 46 56 66 76 86 96
7 7 17 27 37 47 57 67 77 87 97
8 8 18 28 38 48 58 68 78 88 98
9 9 19 29 39 49 59 69 79 89 99
10 10 20 30 40 50 60 70 80 90 100
names-c(c,cc)
for(i in names){nrow(i)}
Thank you!
Georg.
*
Georg
0.3323826
ST 0.9554952 0.9101678 1.000 0.2756876 0.3031676 0.3501157
DR 0.2975892 0.3324979 0.2756876 1.000 0.9981733 0.9674843
DU 0.3211303 0.3331389 0.3031676 0.9981733 1.000 0.9977780
DT 0.3314694 0.3323826 0.3501157 0.9674843 0.9977780 1.000
*
Georg Ehret
Johns
7 NA
lm(a~b)$residuals
1 2 3 4
0 0 0 0
lm(a~b,na.action=na.exclude)$residuals
1 2 3 4
0 0 0 0
Thank you and best regards!
Georg.
**
Georg Ehret
Johns Hopkins
Baltimore, USA
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] 0.700218 0.700175 0.700357 0.700847 0.698286 0.701520 0.698158 0.699300
0.698819
[10] 0.698521
densityplot(~d[1:10])
- crash...
Thank you!
Georg.
*
Georg Ehret
Johns Hopkins
Baltimore, MD
USA
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a wonderful Sunday!
Georg.
**
Georg Ehret
Johns Hopkins
Baltimore
USA
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.
Georg Ehret
Baltimore
USA
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and provide
is clearly 0!
Thanking you and wishing you an excellent day,
Georg.
***
Georg Ehret
Johns Hopkins University
Baltimore, US
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is not a problem (a_indexb), but how can do get only the
elements left if I take out the elements indexed with b?
Thank you and wishing you a great day!
Georg.
Georg Ehret
Baltimore, US
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Dear R community, I wish to combine two tables in one by adding an
additional dimension:
e.g.:
t1-as.table(matrix(rnorm(40),nrow=4,ncol=10));rownames(t1)-c(rowone,rowtwo,rowthree,rowfour)
t1
A B C D E
F G H
data has
been deleted?
Thank you and wishing you an excellent day!
Georg.
Georg Ehret
Johns Hopkins
Baltimore, US
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https
and this did not help... (fig permits for a larger margin, but the text is
still not plotted correctly).
Thank you and wishing you an excellent day!
Georg.
***
Georg Ehret
Johns Hopkins
Baltimore, USA
[[alternative HTML version deleted
idea is also warmly welcome!
Thank you and wishing you a good day!
Georg.
**
Georg Ehret
Johns Hopkins
Baltimore - US
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Dear Stanley, Alternatively you can also look at textplot from the
gregmisc package.
Cheers, Georg.
Georg Ehret
Johns Hopkins
Baltimore, US
On Tue, Apr 15, 2008 at 4:11 PM, Mark Wardle [EMAIL PROTECTED] wrote:
I would look at Sweave, particularly outputting to LaTeX
do wrong. I know
that I can use the command subset and the NAs will not appear, but what is
wrong with a[a$V11,]?
Thank you!
Georg.
***
Georg Ehret
Johns Hopkins
Baltimore, USA
a
V1V2 V3 V4 V5
1 NANA NA
in paste(data, a[1]) - c(1, 2, 3) :
target of assignment expands to non-language object
Thank you and wishing you an excellent day!
Georg.
**
Georg Ehret
Johns Hopkins
Baltimore, MD
USA
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Dear R community,I am using a dataset and would like to define new
variables using a R variable:
e.g.
for (i in 1:10){
dataset$i-something
}
But this is not the right way, I get only one variable in dataset...
How can I change this?
Thank you!
Georg.
Georg Ehret
Dear R community,I have a scatterplot with multiple vertical ablines. I
wish to color each interval between two ablines in a different color...
Could you please indicate me how to do this efficiently?
Thank you!
Georg.
Georg Ehret
Johns Hopkins
Baltimore
it wrong or is there a bug?
Thanks and wishing you a great remainder of the day,
Georg.
**
Georg Ehret
JHU
Baltimore - US
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PLEASE do read the posting
Dear R community,
I wish to print tables into a pdf file. How can this be done, adding
headers and several tables to the same file?
Thanking you for your attention,
Georg.
*
Georg Ehret
Johns Hopkins
Baltimore - US
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Dear R community,
I would wish to color the background of my histogram differently to the
left and right of an abline... Can you please help?
Thankin you,
Georg.
Georg Ehret
JHU
Baltimore - USA
[[alternative HTML version deleted
.
***
Georg Ehret
JHU
Baltimore, MD 21043, USA
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.
**
Georg Ehret
Johns Hopkins
Baltimore
callrates-read.table(RSG,col.names=c(variant,callrate))
hist(callrates[,2],breaks=100)
fraction-nrow(callrates[callrates$callrate=0.9,])/nrow(callrates)
hist(callrates[,2],breaks=100)
text(0.4,500,proportion of callrates = 0.9:)
text(0.4,450,fraction
, Georg.
***
Georg Ehret
Johns Hopkins
Baltimore
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Dear R,
I am writing a simple function to extract the sign of values and apply it
to a data frame (see below). Whatever I do I get error-messages... What is
wrong?
Thanking you in advance,
Cheers, Georg.
***
Georg Ehret
Institute of Genetic Medicine
Johns Hopkins University
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