Re: [R] Help confidence interval graphics

2012-04-25 Thread Michael Bibo
). By making the range on that axis larger, you create more 'white space' at each end of the scale and the lines cluster together in the centre more. Note that you can also customise your axes with axis(), like other plots. Hope this helps, Michael Bibo Queensland Health

Re: [R] need advice on using excel to check data for import into R

2012-04-24 Thread Michael Bibo
the limits of Excel. Hope this helps, Michael Bibo Queensland Health __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented

Re: [R] Organizations where IT has approved the use of R software

2012-04-13 Thread Michael Bibo
lynnland lynn.landriault at ontario.ca writes: I am putting forward a request that R be considered approved software in my organization. Never an easy task, this is made much more difficult given that it is open source software (sends the IT gang into little fits). So, I am compiling a

Re: [R] Reading SPSS: underlying numerical codes

2012-04-12 Thread Michael Bibo
argument of the factor command: ?factor Hope this helps, Michael Bibo Queensland Health __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html

Re: [R] Is it there any std pattern in R which show same representation style of ppt found on net

2012-03-31 Thread Michael Bibo
/08/getting-started-with-beamer-tips-and.html ). You might also like to have a look at http://www.lyx.org/ as an alternative front-end for Latex, and http://impressive.sourceforge.net/ for displaying presentations in PDF form. Hope this helps, Michael Bibo Queensland Health

Re: [R] Export Created Variables to SPSS/.csv

2012-03-27 Thread Michael Bibo
. Somthing like: all.data - data.frame (imported.data, created.variable1, created.variable2, etc) Michael Bibo Queensland Health __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http

Re: [R] barplot with both color and shading

2012-02-22 Thread Michael Bibo
-September/252219.html Michael Bibo michael_biboathealth.qld.gov.au __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal

Re: [R] Problem with ploting fitted values

2011-12-13 Thread Michael Bibo
$fitted.ts - ts(AIRlm$fitted, start = c(1949,1), frequency = 12) plot(lgAP, main=Log of Air Passengers,type=l, col=4, lty=2, lwd=2) lines(AIRlm$fitted.ts, col=2, lwd=2) Hope this helps, Michael Bibo Queensland Health __ R-help@r-project.org mailing

Re: [R] Categorical bubble plot

2011-04-15 Thread Michael bibo
and y. Attached to the email is a pic of what I would like to do. I do hope someone can help me. Have a look at function balloonplot in package gplots. http://finzi.psych.upenn.edu/R/library/gplots/html/balloonplot.html It may do what you want or at least give you some hints. Michael bibo

Re: [R] problems with mosaic plot

2010-12-15 Thread Michael Bibo
graphics device open? Try: graphics.off() to close all currently open devices, and then re-run mosaicplot command, but R is case-sensitive, hence: mosaicplot(Arthritis) mosaicplot(~ Sex + Treatment + Improved, data = Arthritis, color = TRUE) Hope this helps, Michael Bibo Queensland Health

Re: [R] Mean and individual growth curve trajectories

2010-10-31 Thread Michael Bibo
= Subject, type = 'l', panel=function(...){ panel.xyplot(...) panel.loess(...,fun=mean,horizontal=FALSE,col='red',lwd=3) } ) for a smoother curve? Hope it helps, Michael Bibo Queensland Health __ R-help@r-project.org mailing list https

Re: [R] Highlighting a few bars in a barplot

2010-09-09 Thread Michael Bibo
, density=8, angle=90, col=black, add=TRUE ) Hope it helps, Michael Bibo michael_biboathealth.qld.gov.au __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org

Re: [R] Linux Editor

2010-08-02 Thread Michael Bibo
convenient. Is there anything comparable to the mac version of R with its built in console, editor, etc?? thanks! There is also Rgedit for use with the Gnome default text editor gedit: http://www.stattler.com/article/using-gedit-or-rgedit-r Michael Bibo Queensland Health

Re: [R] how to update R10.0 to R11.0 in Ubuntu linux

2010-05-25 Thread Michael Bibo
for upgrade if you do not wish to upgrade your whole system. Finally, note that R-2.11.1 is only days away. Michael Bibo Queensland Health __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting

Re: [R] Are loops handled differently in newer versions of R?

2010-03-16 Thread Michael Bibo
as follows it gives the same answers: for ( i in 1:length(lab8.dat[,1]) ) + p_unadj[i]-calc.prob.t(lab8.dat[i,2], lab8.dat[i,3]) p_unadj [1] 0.034939481 0.015743706 0.089287030 0.001098538 0.039290594 Hope this helps, Michael Bibo, Queensland Health

Re: [R] Preferred Method for Reading in and Processing Access Database

2009-11-18 Thread Michael Bibo
quite straightforward. I usually create a query in Access to assemble the data I want from various tables, and then just access the query from R via RODBC. Michael Bibo Queensland Health __ R-help@r-project.org mailing list https://stat.ethz.ch

Re: [R] installation problem

2009-09-16 Thread Michael Bibo
. Nevertheless these are available at http://www.stats.ox.ac.uk/pub/RWin/bin/windows/contrib/2.9/ kindly provided by Professor Brian D. Ripley. Thus you can download the Windows zip file from there, and install it using the install package(s) from local zip files... menu option. Michael Bibo Queensland

Re: [R] installation problem

2009-09-16 Thread Michael Bibo
Uwe Ligges ligges at statistik.tu-dortmund.de writes: or just say install.packages(XML) as that CRAN extras repository is already a default under Windows. Best, Uwe Ligges Thanks, Uwe. I had tried that, with no success. It turned out that starting R with the --internet2 option

Re: [R] R on Multi Core

2009-09-13 Thread Michael Bibo
performance meter now is interesting, Running R will hold a single core at 100% perfectly, but the other core sites idle.) You might be interested in this article: http://www.jstatsoft.org/v31/i01 Michael Bibo __ R-help@r-project.org mailing list https

Re: [R] SPSS Statistics-R Integration Plug-In

2009-09-10 Thread Michael Bibo
. The links are: R Sources - Windows - base - Previous Releases. The direct link is: http://cran.at.r- project.org/bin/windows/base/old/ That should of course read R Binaries - Windows - base - Previous Releases. __ R-help@r-project.org

Re: [R] SPSS Statistics-R Integration Plug-In

2009-09-08 Thread Michael Bibo
/old/ Michael Bibo Queensland Health __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained

Re: [R] NotePad++ Syntax file

2009-08-10 Thread Michael Bibo
as a supported language in Notepad++: http://sourceforge.net/forum/forum.php?thread_id=3313869forum_id=880832. Michael Bibo Queensland Healh __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http

Re: [R] R editor that will work with Rcmdr

2009-03-06 Thread Michael Bibo
of them are Windows only. Other IDEs such as Eclipse I haven't tested. Hope this is helpful, Michael Bibo Queensland Health __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R

Re: [R] portable R editor

2009-03-02 Thread Michael Bibo
Notepad++'s built-in capacity to run external tools to create new files from templates. Michael Bibo Queensland Health __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org

Re: [R] ggobi install

2009-02-12 Thread Michael Bibo
, but are necessary for installing other apps from source that interact with them. This is a surprisingly little-advertised issue with Linux packaging that I found out about from the R installation manual. Michael Bibo __ R-help@r-project.org mailing list https

Re: [R] plots and text to the same output file

2009-02-11 Thread Michael Bibo
Greg Snow Greg.Snow at imail.org writes: odfWeave works just fine for me on windows and the XML package shows up in my list of packages. You may be overthinking the problem, for most of my odfWeave projects I don't need odfInsertPlot, just use fig=TRUE in the code chunk and only include

Re: [R] Truncated labels with mosaicplot

2009-02-10 Thread Michael Bibo
Marcin Kozak nyggus at gmail.com writes: How can I deal with truncated labels in the mosaicplot()? Look at the example: mosaicplot(~ gear + carb, data = mtcars, color = TRUE) Look at carb (the number of carburetors): the label 8 is truncated. How this might be dealt with? Ummm... not

Re: [R] odfweave sample code error

2009-02-04 Thread Michael Bibo
working with odfWeave through odfWeaveControl(), but I haven't tried this myself. See: http://finzi.psych.upenn.edu/R/Rhelp02/archive/118223.html Hope this helps, Michael Bibo Queensland Health __ R-help@r-project.org mailing list https://stat.ethz.ch

Re: [R] How do I get my IT department to bless R?

2009-01-29 Thread Michael Bibo
environment). Ultimately, though, I think the thing that helped most to convince our IT department to let me try R was when they themselves had the nightmare of dealing with the licensing and accounts division of a certain well-known statistical package proprietor. Michael Bibo Queensland Health

Re: [R] Generating GUI for r-scripts

2009-01-06 Thread Michael Bibo
-forge.r-project.org/). There is also a specific mailing list for gui discussions: http://dir.gmane.org/gmane.comp.lang.r.gui. Hope this helps, Michael Bibo __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read

Re: [R] Repository missing hmisc

2008-10-29 Thread Michael Bibo
stephen sefick ssefick at gmail.com writes: I couldn't download this either with install.packages from two or three mirrors- I haven't tried since thinking that the binaries were being built for windows and mac ... If this isn't right I would be interested. I wondered about this to. If

Re: [R] Creating GUIs for R

2008-10-08 Thread Michael Bibo
(http://rgg.r-forge.r-project.org/gettingstarted.html) might be sufficient to meet your needs. I have only just started looking at it myself, so I'm not speaking from experience, but it seems fairly straightforward to define Gui components in an XML file. Michael Bibo Queensland Health

Re: [R] license for a university

2008-09-03 Thread Michael Bibo
...and, interestingly, the GPL has recently been upheld as enforceable by the United States Court of Appeals for the Federal Circuit: http://www.groklaw.net/article.php?story=2008081313212422 Michael Bibo Queensland Health __ R-help@r-project.org

Re: [R] Problems with playwith()

2008-09-03 Thread Michael Bibo
all the required packages installed. I have no solution, but I have also experienced the same behaviour when 'playing with' the latticist GUI in the playwith package: WinXP; R-2.7.2; GTK 2.12.9. As a GTK comparison, I have not observed the same errors when using rattle GUI. Michael Bibo

Re: [R] Using interactive plots to get information about data points

2008-08-26 Thread Michael Bibo
the boxplot - for a univariate boxplot, all have an 'x' coordinate of 1). In a similar vein, the latticist GUI (package playWith - need GTK libraries or runtime (windows) installed) has similar functionality with parallel boxplots. Hope this helps. Michael Bibo Queensland Health

Re: [R] Using interactive plots to get information about data points

2008-08-23 Thread Michael Bibo
is built specifically for this kind of interactive purpose. I am also trying to produce multiple small plots. For example, four side-by-side boxplots for each of the four variables A, B, C, D. ?par... eg par(mfrow=c(1,4)) (for base graphics). Hope this helps. Michael Bibo Queensland Health

Re: [R] Bubble plots

2008-08-03 Thread Michael Bibo
Cody Hamilton Cody_Hamilton at Edwards.com writes: Is there a way to create a 'bubble plot' in R? For example, if we define the following data frame containing the level of y observed for 5 patients at three time points: time-c(rep('time 1',5),rep('time 2',5),rep('time 3',5))

Re: [R] Graphics not working for R in ubuntu

2008-07-19 Thread Michael Bibo
automatically open the default graphics device (X11). For a GUI under Linux, you have a number of choices including (X)emacs+ESS; JGR; RKward; and, of course, RCmdr. See the 'R GUI Projects' page on your favourite CRAN site. Hope this helps. Michael Bibo Queensland Health

Re: [R] Problems with Rcmdr unter JGR (Windows XP)

2008-02-14 Thread Michael Bibo
. Under Linux, I have had Emacs/ESS and Rcmdr running together. I don't know about JGR, as I don't presently have it installed on a Linux box. If you want to use Rcmdr under Windows, the combination of R-Gui, Tinn-R and Rcmdr works well. Michael Bibo Research Officer Queensland Health

Re: [R] HTML help search in R 2.6.0 v 2.6.1

2007-12-05 Thread Michael Bibo
Peter Dalgaard p.dalgaard at biostat.ku.dk writes: Has something changed from 2.6.0 to 2.6.1 that may require JVM 1.4.1? If so, I can use that information to request an upgrade of my JVM. Hmm, could be. They got rebuilt on my system and committted at some point in the

Re: [R] Is R portable?

2007-12-04 Thread Michael Bibo
Tom Backer Johnsen backer at psych.uib.no writes: I am also informed that it is possible to run Latex in this manner. http://finzi.psych.upenn.edu/R/Rhelp02a/archive/107419.html refers to http://at-aka.blogspot.com/2006/06/portable-emacs-22050-on-usb.html which can give you a portable