there is only 1 ID and
the values of each columns A...G are added. I
n the example the new table would have only 3 IDs. a1, a2 and 3 and a2
has the values added by column:
a2 0 2 1 3 2 4 2..
Thank you so much and have a wonderful year!.
--
Pablo A. Ortiz-Pineda (Ph.D.)
Molecular
I am analyzing data from 3 field experiments (farms=3) for a citrus flower
disease: response variable is binomial because the flower can only be
diseased or healthy.
I have particular interest in comparing 5 fungicide spraying systems
(trt=5).
Each farm had 4 blocks (bk=4) including 2 trees as su
the course.
Below you find more information about this course. If you have any
question don't hesitate to contact me.
Best regards,
Pablo
++
Course: Introduction to Statistical Data Analysis with R
Where: Linux Hotel, Essen-Horst, Germ
lides),
an excursion to the Christmas' market of Essen and another excursion to
one historical industrial area.
If you have any question doesn’t hesitate to contact me.
Best regards,
Pablo
++
*Three days course in: Bayesian Data Anal
Thank you both.
I just wanted to point out that before assigning the order of colors in
vector col, one should check that it corresponds with how levels are
ordered in levels(mydata$Col3).
Best,
Pablo
2015-04-23 5:46 GMT+02:00 Richard M. Heiberger :
> Pablo,
>
> I would do it simi
YOU REPRODUCE THE EXAMPLE YOU WILL SEE THAT THE COLORS ARE NOT RELATED
TO THE LEVELS IN MY DATAFRAME AS YY BOX IS NOT ALWAYS GREEN.
IS THERE A WAY TO ASSIGN YY:green, NN:red, YN:amber?
You can see the resulting figure in:
http://stackoverflow.com/questions/29802129/r-lattice-bwpl
Hi all,
Which is a formal bibliography citation of an R's task view? For example
if I want to make a citation of "MetaAnalysis" task view.
Thanks in advance!
Pablo
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Hi Chris,
Try the form: plot(dens, useRaster=FALSE, ribargs=list(useRaster=FALSE))
Pablo
2014-06-20 15:58 GMT-05:00 Christopher W Ryan :
> I'm back in the office with the machine that was giving me trouble.
>
> # fresh start-up of R 3.1.0, installed on the my machine's h
Dear Adrian,
Yes, effectively utilizanddo useRaster = FALSE, the plot is printed. Only
the ribbon appears without color.
I'm using R version 3.0.2, Windows 7 system, and spatstat 1.33-0 package
version.
Best wishes
Pablo
2014-06-18 19:50 GMT-05:00 Adrian Baddeley :
> Dear Pablo
&g
and perform
the plot, the graph is obtained without problem.
Best wishes
Pablo
2014-06-17 16:23 GMT-05:00 Rolf Turner :
> On 18/06/14 03:49, Christopher W Ryan wrote:
>
>> I upgraded to version 3.1.0 of R, still on Win XP, but that did not
>> solve the problem:
>>
>
Dear list members,
Apologies for cross-posting. Please, find below the information of
an introductory Bayesian Data Analysis course with R and WinBUGS.
If you have any question don't hesitate to contact me.
Best regards,
Pablo
++
C
.
Thanks in advance!
best,
Pablo
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Anyone is working with the upgrade of any multilevel package for apply
sampling weights?
Thanks
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PLEASE do read the posting gu
Dear list members,
Best greetings and apologies for cross-posting. There are available
places for the course:
"Bayesian Data Analysis with R and WinBUGS", please find the description
of the course below.
If you have any question don't hesitate to contact me.
Best
dataset in stata.
>
> I don't think foreign library in R supports stata 13 yet.
>
> Richard
>
> On Wed, Oct 2, 2013 at 3:11 PM, Pablo Menese Camargo
> wrote:
> > foreign package does not support dataset saved at stata 13.
> > anyone knows any wayt to make
foreign package does not support dataset saved at stata 13.
anyone knows any wayt to make it works?
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PLEASE do read the posting
I have this
mcfa<-
"impulsivity=~imp1r+imp2+imp3+imp4
physical=~phys1+phys2+phys3+phys4
risky=~risk1+risk2+risk3+risk4
selfish=~self1+self2+self3+self4
simple=~simp1+simp2+simp3+simp4r
temper=~temp1+temp2+temp3+temp4
control=~impulsivity+physical+risky+selfish+simple+temper"
where: the model is a
I'm using lavaan indeed
On Mon, Aug 12, 2013 at 6:21 AM, Jose Iparraguirre <
jose.iparragui...@ageuk.org.uk> wrote:
> Hi Pablo,
>
> Prof John Fox is a frequent contributor to this forum, and no-one is
> better placed than him to respond on your particular point, but I
I have this
mcfa<-
"impulsivity=~imp1r+imp2+imp3+imp4
physical=~phys1+phys2+phys3+phys4
risky=~risk1+risk2+risk3+risk4
selfish=~self1+self2+self3+self4
simple=~simp1+simp2+simp3+simp4r
temper=~temp1+temp2+temp3+temp4
control=~impulsivity+physical+risky+selfish+simple+temper"
where: the model is a
I want to make an index using IRT, I use eRm package.
I have a data frame (24 items, 4 categories, 427 cases) that works if I use
PCM (partial credit model), but, when I run RSM (rating scale model) this
appear:
Error in solve.default(parest$hessian) :
Lapack routine dgesv: system is exactly sin
Dear list members,
Apologies for cross-posting. Please, find below the information of
two statistical courses with R:
1) Statistical Analysis with R
2) Bayesian Data Analysis with R and WinBUGS
If you have any question don't hesitate to contact me.
Best regards,
Hi,
I'm trying to perform a hierachical, second order CFA.
That's the thing that I need to leave AMOS.
I found some sim.hierarchical and omega stuff, but nothing clear enough.
Can anyone help me?
I just need a simple and clear manual.
Best,
Pablo.
[[alternative HTML versi
you create the matrix using
> cbind, as in my matrix3 example.
>
> -Don
>
>
> --
> Don MacQueen
>
> Lawrence Livermore National Laboratory
> 7000 East Ave., L-627
> Livermore, CA 94550
> 925-423-1062
>
>
>
>
>
> On 2/28/13 5:53 PM, "Pablo M
I'm performing item response theory with eRm packages
I am excluding the persons that doesn't fit in the infit/outfit persons.
for that I created a condition. then I have to create a new subset or
matrix but with the condition.
So:
ORIGINAL
matrix<-cbind(item1, item2, item3, item4)
IF I PERFORM
thanks a lot. works!!!
On Tue, Feb 26, 2013 at 7:58 AM, Prof Brian Ripley wrote:
> On 26/02/2013 09:55, Milan Bouchet-Valat wrote:
>
>> Le lundi 25 février 2013 à 20:26 -0300, Pablo Menese a écrit :
>>
>>> I use to work whit stata dataframe, so, when I use R I type re
I use to work whit stata dataframe, so, when I use R I type read.dta
Until today I do that without any problem, after type:
mydata<-read.dta("C:/dropbox/dataframe.dta")
attach(mydata)
Everything works great... but today, when I typed:
mydata<-read.dta("C:/dropbox/dataframe.dta")
attach(mydata)
81 .0410122 .4743798 .6359363
So, I thing that the problem is in the survey design...
On Tue, Nov 27, 2012 at 11:49 PM, David Winsemius wrote:
>
> On Nov 27, 2012, at 2:31 PM, Pablo Menese wrote:
>
> Sorry, it send it alone...
>>
>> When I use it:
>>
>
:
> Le mardi 27 novembre 2012 à 18:33 -0300, Pablo Menese a écrit :
> > I can't ... I don't know why but I can't
> >
> > When I use it:
> >
> > logit <- glm(bach ~ egp4 + programa, weight=wst7,
> > family=quasibinomial(link"logit"))
>
>
> http://journal.r-project.org/archive/2009-2/RJournal_2009-2_Damico.pdf
>
> once you're ready to run the regression, use svyglm() instead of glm() and
> drop the weights argument (since it will already be part of the survey
> design) :)
>
>
>
> On Fri, Nov 23, 2012
Sorry, it send it alone...
When I use it:
logit <- glm(bach ~ egp4 + programa, weight=wst7,
family=quasibinomial(link"logit"))
I reach the same betas that in STATA, but the hypothesis test, the t value,
and the std. error is different.
I think that the solution can't be so far from this...
I colud not, even without attach the dataset.
The thing is, when I use this
On Fri, Nov 23, 2012 at 5:56 PM, David Winsemius wrote:
>
> On Nov 23, 2012, at 12:08 PM, Pablo Menese wrote:
>
> I have this problem.
>>
>> test <- svydesign(id=~1,weights=~peso)
>&g
Until a weeks ago I used stata for everything.
Now I'm learning R and trying to move. But, in this stage I'm testing R
trying to do the same things than I used to do in stata whit the same
outputs.
I have a problem with the logit, applying weights.
in stata I have this output
. svy: logit bach job
be in design= argument
I don't know what this mean...
Please help.
Pablo.
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Dear list members,
Apologies for cross-posting, there are some places available in an introductory
R course.
Please, find below the information of this R training course.
If you have any question, don't hesitate to contact me.
Best regards,
gn=dstrat)
is correct, using only the var names, not dstrat[smth]~dstrat[smth]+
dstrat[smth]
If you write the names correctly it should work
regards
pablo
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It seems the var names you've put are not the same as in the design object:
"all variables must be in design= argument ": that means the object you've
assigned in mydesign <- svydesign(ids=~vill_neigh_code+clust,
strata=~strat, weights=~sweight, data=mydata)
Check the spelling. Note that the "myd
Regarding regression models, there's a bit of discussion on whether or not
it is necessary to take the sample design into account (for instance, SPSS
doesn't), so you can run them just normally without much remorse. Or get
your life complicated (see below).
Your xtabs call seems OK to me. However,
Dear list members,
Apologies for cross-posting. Please, find below the information of
an introductory Bayesian Data Analysis course with WinBUGS and R.
If you have any question don't hesitate to contact me.
Best regards,
Pablo
++
C
I'm manually doing a form of stepwise regression in a mixed model but with
many variables, it is time consuming. I thought I'd try to use an automated
approach. stepAIC gave me false convergence when I used it with my model,
so I thought it can't be hard to set up a basic program to do it based o
;- laply(1:6, function(a) get(paste('x', a, sep = '')))
rowMeans(x1.6)
It is nice because it's easily extendable to matrices too which I want to do
later - change rowMeans(x1.6) to colMeans(x1.6).
Thank you all for your help,
Pablo
--
View this message in context:
http
ector(rnorm(10))
I would like the mean of x1 to x6 for each vector position. I would do
something else with x7-x10. These vectors are not currently in a dataframe.
I tried to be clever by trying get(paste(paste("x", 1:6, sep=""),
collapse="+")) but it didn't
The references are here: http://manning.com/kabacoff/excerpt_references.pdf
(they will be included on the next printing too, got omitted by mistake)
Regards,
Pablo
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The references are here: http://manning.com/kabacoff/excerpt_references.pdf
(they will be included on the next printing too, got omitted by mistake)
regards,
Pablo
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stical package,
it is possible to change the design so there is no "baseline" and the
effects can be tested.
I don't need a economy book, I'm an ecologist.
Please, think before post anything like your mail.
Pablo
PS. David, many thanks for your help.
__
0:00:00")
t.start
t.vector <- t.start + (0:24)*3600
t.vector
z.vector <- 1:length(t.vector)
z.vector
##vector of decimal hours
dh.vector <- decimal.hour(t.vector)
dh.vector
plot(x=dh.vector, y=z.vector, xlim=c(0,24), xaxt="n", xlab="Hour of day",
ylab="Some
which has basically nothing to do with extracting a subset of rows from a
> dataframe.
>
> -Don
>
> --
> Don MacQueen
>
> Lawrence Livermore National Laboratory
> 7000 East Ave., L-627
> Livermore, CA 94550
> 925-423-1062
>
>
>
>
>
> -Original
13.35 17.99
4 2011-03-15 00:00:30 1 13.35 18.00
5 2011-03-15 00:01:00 2 13.35 17.98
6 2011-03-15 00:01:30 3 13.35 17.99
7 2011-03-15 00:02:00 4 13.35
Dear Colleges,
Apologies for cross-posting. Places are available in the following
course:
"Introduction to Bayesian Data Analysis using WinBUGS and R"
Best Regards,
Pablo
++
Course: Introduction to Bayesian Data Analysis usi
in the package survival.
Cheers,
Pablo
Thanks,
Al
--
View this message in context:
http://r.789695.n4.nabble.com/1-continuous-non-normal-variable-4-factors-1-continuous-covariate-with-interactions-tp3444378p3444378.html
Sent from the R help mailing list archiv
Hi Shane,
An alternative is:
cat<-as.factor(c(1,1,3,2,4))
outer(cat, levels(cat), "==")+0
Cheers,
Pablo
- Original Message -
From: "andrija djurovic"
To: "Shane Phillips"
Cc:
Sent: Tuesday, April 12, 2011 2:32 PM
Subject: Re: [R] Converting a
;- survreg(Surv(Time, Status) ~ -1 + tr, data = dat[Ind,])
b <- coef(mod1)
delta <- b[1] - b[2] # statistic of interest
delta
}
# Bootstraping ...
library(boot)
boot.res <- boot(test1, boot.fun, R = 1999)
boot.res
boot.ci(boot.res)
plot(boot.res, jack = TRUE)
# end ...
Cheers,
Pablo
I-likelihood = -95.7
...
In this case I expected that the variance of random effects is close to 4.
Thanks!
Pablo
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Apologies for cross-posting. Places are available in the following
course:
"Introduction to Bayesian Data Analysis using WinBUGS and R"
Best Regards,
Pablo
++
Course: Introduction to Bayesian Data Analysis using WinBUGS an
Hi,
I need a function to convert an ARMA process to an "infinite" AR process. I
know that in the Stats package exist one to convert an ARMA to MA, but i can't
find one function to convert to AR. There exists one?
THANKS
__
R-help@r-project.org maili
Dear Dennis,
I sampled five different plots inside six predetermined areas in three
diferent days.
Am I doing the analysis right?
Thanks,
Pablo
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Sent from the R help
y, I am sure its not right
because of these "NaN" produced and because of the area beeing assigned as
Random in the output.
I would appreciate any help and thanks for your attention in advance,
Pablo
--
View this message in context:
http://r.789695.n4.nabble.com/Nestad-ANOVA-with-ran
Thanks! That was exactly what I was looking for.
best regards
*pablo de camargo cerdeira*
pablo.cerde...@gmail.com | pa...@fgv.br
Phone: +55-(21)-3799-6065
[image: Facebook] <http://www.facebook.com/pablo.cerdeira>[image:
LinkedIn]<http://br.linkedin.com/in/pablocerdeira>[image:
G
ne help me with this?
If possible, I'd like to plot this curves in a perfect cartesian plane.
f = function(x) {
x^2
}
f2 = function(x) {
-x^2
}
plot(f,-10,10)
abline(h=0, v=0, col = "gray60")
curve(f2,col="orange", add=T)
Thanks in advanced!
*pablo de camargo cerdeira*
e, Aug 3, 2010 at 8:03 AM, Pablo Cerdeira wrote:
> Hi All,
>
> I'm trying to run the following script in R, but I'm getting a warning saying:
>
> Warning message:
> In if (z < 0) { :
> the condition has length > 1 and only the first element will be used
>
>
}
else {
mod <- x
}
}
f = function(x) {
f <- mod(x)/x
}
x <- seq(-1,1,0.01)
x
y <- f(x)
y
plot(f,xlim = c(-1,1))
remove(x,y,f,mod)
best regards,
--
Pablo de Camargo Cerdeira
pa...@fgv.br
pablo.cerde...@gmail.com
+55 (21) 3799-6065
__
This is a good example of what I'm looking for:
[image: dendrogram.jpg]
Best
On Thu, Jul 29, 2010 at 12:01 AM, Pablo Cerdeira
wrote:
>
> Dear all,
>
> I'm trying to use some technic to do a pattern recognition over a large
> dataset. I really don't have any
dispersion graph, identifying the possible clusters.
Does anybody have any idea on how to do something like this?
Many thanks, in advanced,
--
*Pablo de Camargo Cerdeira*
pa...@fgv.br
pablo.cerde...@gmail.com
+55 (21) 3799-6065
[[alternative HTML version deleted]]
___
dataset to you.
Best regards and thank you very much,
On Tue, Jul 27, 2010 at 10:16 AM, Jim Porzak wrote:
> Pablo, we've had success using
> http://mephisto.unige.ch/traminer/preview.shtml to look at marketing
> paths. Question would be how many distinct case step discript
8-10-12 00:00:00","MIN. PAULO BROSSARD",6677
1480183,2,20,3,"ADIADO O JULGAMENTO","1991-07-01 00:00:00",32,"FÓRUM DA
COMARCA DE RANCHARIA","1988-10-12 00:00:00","MIN. PAULO BROSSARD",6677
1480183,2,21,158,"DECISAO PUBLICADA, DJ:&quo
ave no idea on how to do it using R. Can someone help me?
Thanks in advanced
--
*Pablo de Camargo Cerdeira*
pa...@fgv.br
pablo.cerde...@gmail.com
+55 (21) 3799-6065
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PLEAS
x27;d like to read more about this amazing tool.*
*
*
*Thanks in advanced, again,*
*
*
*best regards*
--
Pablo de Camargo Cerdeira
pablo.cerde...@gmail.com
+55 (21) 3799-6065
[[alternative HTML version deleted]]
__
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gt; ~ Roger Brinner
>
> The combination of some data and an aching desire for an answer does not
> ensure that a reasonable answer can be extracted from a given body of
> data.
> ~ John Tukey
>
>
> > -Oorspronkelijk bericht-
> > Van: r-help-boun...@r-project.org
&g
he auto.key list.
>
> There are **many** options in xyplot() and other Lattice graphics
> functions, so you have the capability of fine tuning a graph to meet your
> specifications.
>
> HTH,
> Dennis
>
>
> On Tue, Jun 29, 2010 at 5:42 PM, Pablo Cerdeira
> wrote:
&
ar so good...
But the problem is: I'd like to create a multiline plot, one line per AREA,
showing the evolution of the number of CASES per YEAR.
I know how to do it in Excel, using a Pivot Table. But I'm trying hard to do
the same with R but I have no idea on how to do it.
Can someone
Hello list,
I want to combine dataframes from tsv files which have different row lenght.
I tryed cbind but doesn't work.
Is there an easy way to fill with NAs till a common point of rows for all
the dataframes and then merge them?
Any other idea?
Thanks a lot,
Juan
[[alternative HTML ve
Dear Duncan,
Thank you for clarifying this issue.
Cheers,
Pablo
- Original Message -
From: "Duncan Murdoch"
To: "Kenneth Roy Cabrera Torres"
Cc: ;
Sent: Thursday, January 07, 2010 3:12 PM
Subject: Re: [R] How to report or correct translations typos?
>
y much for your help,
Pablo and Margarita
PS. We have already installed: GDAL (for QGIS) and "sp" (for R)
_
[[alternative HTML version deleted]]
_
ng is something like this:
heatmap.2(x, scale="none", cexRow=0.1, keysize=0.8, hclustfun = hclust,
sepcolor="none",Colv=FALSE, dendrogram="row",
trace=c("none"),density.info=c("none"))
If you can help me, will be great.
Thanks in advance,
j
Dear r-help contributors,
I have two questions:
first:
I have a matrix A and a vector B.
I want to make a new matrix C, which is made of the rows of A having a value
included in B.
Second:
I have two matrixes A and B, of different dimensions.
B has unique values in column 2 and A has not uniqu
to the file with same [x,1] value of blue, adding a cero in the case that
there is no
[x,1] corresponding value in the red matrixes (case for row 2 of blue).
Thanks in advance,
juan
Juan Pablo Fededa
[[alternative HTML version deleted]]
__
R
Thank you very much!
It helps a lot. You are right about the NA´s in the coefficients, the model
needs some simplification.
Thank you again.
---
Pablo Pita Orduna
Grupo de
38e-02 NA
NA
I would like to know if it is possible to extract the intercepts and
the slopes for Year and Year^2 for this Model2.
Thank you very much for your help.
____
Pablo Pita Orduna
Gr
Hi all,
I have the next matrix:
ab c
1223
2342
3054
4523
5022
6721
7120
8919
I want to filter the rows with the values of b higher than 1 in a way tha
hanx
Sake
--
*Pablo G Goicoechea*
Bioteknología Saila / /Dpto Biotecnología/
NEIKER-Tecnalia
Apdo 46
01080 Vitoria-Gasteiz (SPAIN)
Phone: +34 902 540 546 Fax: +34 902 540 547
pgoikoet...@neiker.net <mailto:pgoikoet...@neiker.net>
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
78934812
Hope this helps
Pablo
John Sorkin escribió:
Please forgive the cross posting. I sent this to Medstats and have not received
any response.
I am looking for a good written explanation of components of variance (a.k.a va
riance components), in particular as they are used i
Just out of curiosity, what system do you have?
These are the results in my machine:
> system.time(exp(m), gcFirst=TRUE)
user system elapsed
0.520.040.56
> library(pnmath)
> system.time(exp(m), gcFirst=TRUE)
user system elapsed
0.660 0.016 0.175
J
a/R-271/lib/R/library/pnmath/libs/pnmath.so':
libgomp.so.1: shared object cannot be dlopen()ed
Error: package/namespace load failed for 'pnmath'
I find it odd, because libgomp.so.1 is in /usr/lib, so R should find it.
Juan Pablo
On Sun, Jun 29, 2008 at 1:36 AM, Martin Morg
is very simple, it doesn't require any communication
between parallel tasks; only that it divides simetricaly the task
between the available cores. Also, I don't want to run the code in a
cluster, just my multicore machine (4 cores).
What solution would you propose, given your experience
om: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On
> Behalf Of Juan Pablo Romero Méndez
> Sent: Tuesday, June 24, 2008 11:51 AM
> To: [EMAIL PROTECTED]
> Subject: [R] Equivalent of Mathematica's Apply
>
> Hello,
>
> Is there some equivalent function in R of Mathema
5 10
and I'd like to extract sequences 1:6, 2:7, 3:8, ..., 5:10 from a vector x.
What would be the most compact way of achieving this?
I've tried
sapply(1:5, function(i) x[ind[i,1] : ind[i,2]])
Although
sapply(1:5, function(i) x[seq(ind[i,])])
would be better (if i
,
Juan Pablo
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and provide commented, minimal, self
Hello,
I'm having trouble installing rJava on R-2.6.1 / Suse10.3.
What could be wrong?
Regards,
Juan Pablo
This is the output of
> install.packages("rJava", dependencies=T)
--- Please select a CRAN mirror for use in this session ---
Loading Tcl/Tk interface ... do
Hi Ingmar
Have you opened X11?
hope it helps
Pablo
Ingmar Visser escribió:
> Dear R-help,
>
> I'm trying to load the fGarch package and keep running into problems
> with tcltk:
>
> After succesfully instaling fGarch (and dependencies) I get:
>
> >library(fG
I've problem with this pkg:
- quantreg
- party
When i try to run this pkg under 2.6.2 (win 32). the system reports problems to
reed the Rblas lib. (Not find the dynamic library links)
Any suggestions to solve the problem ...
tks, pablo.
--
Pablo Fco. Fernández Al
Dear Contributors:
I have two vectors x and z, and I want to display the histograms of both
vectors in the same graph, x in red bars, z in blue bars.
If you have any clue on how to do that, I will be very glad to hear it!!
Thanks in advance again,
Juan Pablo Fededa
[[alternative
Dear Contributors:
I have the next vector:
"Z"
z = (526, 0.1, 110, 0.2, 34, 0.4, 614, 0.5, 1, 14, 15)
I want to generate a vector containing the values higher than 1
corresponding to the z vector, wich in this case will mean to generate the
next vector:
(526, 110, 34, 614, 14, 15)
If you ha
on,
and so on.
Is this doable in a simple way??
Thanks in advance again,
Juan Pablo Fededa
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a
among old timers themselves.
Packages reviews are another issue. But if anybody is going through all that
work, why not to make the appropriate corrections to the packages? They are
GPL, aren't they?
Best
Pablo
Mark Kimpel escribió:
I'll throw one more idea into the mi
Is this doable?
Thanks in advance again,
Juan Pablo
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and provide commented, minimal, self-contained, reproducible code.
Hi all,
I want to invert the y axis of a plot, how can I do that in an easy way?
Thanks in advance,
Juan Pablo
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