[R] hdf4 files

2012-07-26 Thread uday
you Uday -- View this message in context: http://r.789695.n4.nabble.com/hdf4-files-tp4637921.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do

Re: [R] R packages installation error in Ubuntu

2012-07-20 Thread uday
hi , last time I did not mention the specific version of linux and it was problem with only syntax but with correction I got new error. I found that some people has faced this problem before and some of them have mentioned that it may be because of dependencies issue and

[R] package installation error in unix

2012-07-19 Thread uday
Hi, Recently I have installed R in my Linux operating system , after installation I was trying to install some packages and I was getting error installed.packages(hdf5) { Package LibPath Version Priority Depends Imports LinkingTo Suggests Enhances OS_type License Archs Built} this

Re: [R] package installation error in unix

2012-07-19 Thread uday
Hi Thanks for reply after usinginstall.packages(hdf5) I get error {Installing package(s) into ‘/home/uday/R/x86_64-pc-linux-gnu-library/2.14’ (as ‘lib’ is unspecified) trying URL 'http://cran.revolutionanalytics.com/src/contrib/hdf5_1.6.9.tar.gz' Content type 'application/x-gzip' length 50870

[R] R packages installation error in Ubuntu

2012-07-19 Thread uday
. install.packages(hdf5) Installing package(s) into ‘/home/uday/R/x86_64-pc-linux-gnu-library/2.14’ (as ‘lib’ is unspecified) trying URL 'http://cran.revolutionanalytics.com/src/contrib/hdf5_1.6.9.tar.gz' Content type 'application/x-gzip' length 50870 bytes (49 Kb) opened URL

[R] vector subtraction

2012-04-20 Thread uday
I would like to calculate vector from existing value e.g v - 1000 s - 30 d1- v-s d1- 970 d2- d1 -s d2- 940 d 3 - d2-s d3- 910 : : d15 - . so how I should get vector of length 15 d

[R] interpolation issue

2012-04-18 Thread uday
function approx(pres, sci.pre) Error in xy.coords(x, y) : 'x' and 'y' lengths differ I am looking for interpolated output with 1 x 19 demotions . does somebody knows how to deal with this issue ? Thanks Uday -- View this message in context: http://r.789695.n4.nabble.com/interpolation-issue

Re: [R] interpolation issue

2012-04-18 Thread uday
Uday -- View this message in context: http://r.789695.n4.nabble.com/interpolation-issue-tp4567362p4567826.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r

Re: [R] spaghetti plots in R

2012-04-05 Thread uday
Hi Rui, Thanks a lot it works -- View this message in context: http://r.789695.n4.nabble.com/spaghetti-plots-in-R-tp4532021p4534110.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list

[R] data normalize issue

2012-04-05 Thread uday
http://r.789695.n4.nabble.com/file/n4534914/Rplot01.png I have some dataset ak[1:3,] [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [1,] 0.3211745 0.4132568 0.5649930 0.6920562 0.7760113 0.8118568 0.8609301 0.9088819 0.9326736 [2,] 0.3159234

[R] spaghetti plots in R

2012-04-04 Thread uday
I would like to plat some spaghetti plots from my data , ma data is as follows ak[1:3,] [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [1,] 0.3211745 0.4132568 0.5649930 0.6920562 0.7760113 0.8118568 0.8609301 0.9088819 0.9326736 [2,] 0.3159234

Re: [R] spaghetti plots in R

2012-04-04 Thread uday
Hi Liviu , thanks for post , but I could not find findFn('spaghetti') , I can see the following functions in sos package Extract.findFn findFn grepFn hits installPackages PackageSum2 PackageSummary print.findFn sortFindFn summary.findFn unionFindFn writeFindFn2xls -- View this

Re: [R] spaghetti plots in R

2012-04-04 Thread uday
,],pre[2,],type=l,col=red) but every files contains more than 1000 observations. Is it possible to use this function for two different matrix data ? if yes then please let me know how to do it . Thanks Uday -- View this message in context: http://r.789695.n4.nabble.com/spaghetti-plots-in-R

[R] conversion of Modified Julian Days to YMDHMS format

2012-04-03 Thread uday
Does anybody knows how to convert Modified Julian Days(MJD) to YMDHMS format? The sample data set which I have is as follows time - c(1832.415 ,1832.415 ,1832.415 ,1832.415 ,1832.415 ,1832.415 ,1832.415, 1832.415, 1832.415 ,1832.415) which is Days since 1.1.2000 (in UT time, starting at

[R] reading files from two folders

2012-03-28 Thread uday
I would like to read data from two different folder and then combine this together the code which I have tried are as follows setwd(/Groups/data_first/) file_was - list.files(path = ., pattern = v2.0.2.was, all.files = FALSE, full.names = FALSE, recursive = FALSE, ignore.case = FALSE)

Re: [R] reading files from two folders

2012-03-28 Thread uday
/data_second/) file_wasaux2 -list.files(path,pattern=v2.0.2.wasaux2) files- 1 for ( i in files){ data1 - read.table(file_was[i],header=TRUE) data2 - read.table(paste(path, file_wasaux2[i],sep=),header=TRUE) data - cbind (data1,data2) } data Cheers Uday -- View

Re: [R] reading files from two folders

2012-03-28 Thread uday
Hi Hth -- Gerrit , thanks for reply sorry it was typo mistake , but I corrected that problem before . But the error is still same. setwd(/Groups/data_first/) file_was - list.files(path = ., pattern = v2.0.2.was, all.files = FALSE, full.names = FALSE, recursive = FALSE, ignore.case =

Re: [R] plotting border over map

2012-03-19 Thread uday
Hi Ray, Thanks for reply /R/PlotGridded2DMap.R /R/image.plot.fix.R /R/image.plot.plt.fix.r are the functions those I wrote for plotting and they work with another data, but only I have some issue with only the codes those I provided before. and what do you mean by I am redefining the map()

Re: [R] replacing values in Array

2012-03-16 Thread uday
Hey Gerrit , Thanks your solution works -- View this message in context: http://r.789695.n4.nabble.com/replacing-values-in-Array-tp4468739p4477758.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list

[R] plotting border over map

2012-03-16 Thread uday
I am using following codes to plot map library(sp) library(rgdal) library(maps) library(gplots) library(clim.pact) library(fields) source(/R/PlotGridded2DMap.R) source(/R/image.plot.fix.R) source(/R/image.plot.plt.fix.r)

[R] replacing values in Array

2012-03-13 Thread uday
I want to replace some values in my Array e.g data- c(1,2,3,4,5,6,7,8,9,10,11,12) I would like to replace 1,2,3 by 1 , 4,5,6 by 2, 7,8,9 by 3 and 10,11,12 by 4 I am expecting out put data- 1 1 1 2 2 2 3 3 3 4 4 4 I have tried replace function replace(data, (data==1 |data==2| data==3),1)

[R] reading HDF5 or H5 files

2012-03-09 Thread uday
I would like to read hdf5 or h5 files in R . I found two packages hdf5 and h5r , but in both packages they have information how to get attribute from data. In my case I would like see what kind of parameters are saved in every file. I have tried h5 -

[R] add data from .RData file

2012-03-07 Thread uday
I got two .RData file e.g data.2005.RData data.2006.RData I would like to combine these two different data set and make single RData file. in both file there are some NULL files are also available and I would like to clear this NULL files also. $ : NULL $ : NULL $ : num [1:43285, 1:8] -21.1

Re: [R] add data from .RData file

2012-03-07 Thread uday
]) cheers Uday -- View this message in context: http://r.789695.n4.nabble.com/add-data-from-RData-file-tp4453981p4454461.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman

[R] convert point data to grid

2012-03-04 Thread uday
I would like to convert my point data to grid data my data contains e.g lat - c(25.1618 , 24.8664, 21.0575, 21.1537, 21.2477, 21.3403, 20.7617, 20.8577, 20.9516, 21.0443) lon - c(55.7660, 55.6890, 54.7205, 54.2142, 53.7105,53.2053, 54.6470, 54.1419, 53.6389, 53.1348) z - c(

[R] projection problem in sp package

2012-03-02 Thread uday
I am plotting some data using sp package library (sp) library(maps) data.aggm # data # Define standard projection ll - CRS(+proj=longlat +datum=WGS84) # convert to a SpatialPointsDataFrame xy - cbind(data.aggm[,1], data.aggm[,2]) ch4.spPoints -

Re: [R] saving all data in r object

2012-02-24 Thread uday
Hi Iris, thanks for reply but this solution does not work Uday -- View this message in context: http://r.789695.n4.nabble.com/saving-all-data-in-r-object-tp4413092p4417933.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r

[R] listing array after loop

2012-02-24 Thread uday
I want to create r object from my data set. I have several data files and I would like to read individual parameter from file and save all 10 files parameter in a single array e.g setwd(/temp/) file_s - list.files(path = ., pattern = 0b.was, all.files = FALSE, full.names =

Re: [R] listing array after loop

2012-02-24 Thread uday
The following error I got Warning messages: 1: In sci.lat[i] = data[, 7] : number of items to replace is not a multiple of replacement length 2: In sci.lon[i] = ((temp.lon + 180)%%360) - 180 : number of items to replace is not a multiple of replacement length 3: In sci.ch4[i] = data[, 45] :

[R] saving all data in r object

2012-02-23 Thread uday
,temp=temp, file=data.RData) but it does not work. I am new in R and I got stuck here. Cheers Uday I am beginner in R and I got stuck here -- View this message in context: http://r.789695.n4.nabble.com/saving-all-data-in-r-object-tp4413092p4413092.html Sent from the R help mailing list

Re: [R] saving all data in r object

2012-02-23 Thread uday
Thanks for reply Michael the error which I got is as follows : Error in gzfile(file, wb) : cannot open the connection In addition: Warning message: In gzfile(file, wb) : cannot open compressed file 'data.RData', probable reason 'Permission denied' -- View this message in context:

Re: [R] saving all data in r object

2012-02-23 Thread uday
Michael , the first error which I got is number of items to replace is not a multiple of replacement length sorry last time it did not copied whole thing -- View this message in context: http://r.789695.n4.nabble.com/saving-all-data-in-r-object-tp4413092p4414058.html Sent from the R help

Re: [R] removing particular row from matrix

2012-02-22 Thread uday
Hi Dan, I am sorry about that it was typo mistake but the both values are -999.99 . your solution works. Thanks Uday -- View this message in context: http://r.789695.n4.nabble.com/removing-particular-row-from-matrix-tp4407401p4409513.html Sent from the R help mailing list archive

Re: [R] removing particular row from matrix

2012-02-22 Thread uday
dimensions it need matrix, so is there any way to deal with this kind of problem. Cheers Uday -- View this message in context: http://r.789695.n4.nabble.com/removing-particular-row-from-matrix-tp4407401p4411348.html Sent from the R help mailing list archive at Nabble.com

[R] removing particular row from matrix

2012-02-21 Thread uday
expected answer [,1] [,2][,3] [1,]255.00 [2,]369.00 I am new in R I got stuck with this step. Uday -- View this message in context: http://r.789695.n4.nabble.com/removing-particular-row-from-matrix-tp4407401p4407401.html Sent from the R help mailing list

Re: [R] Plotting monthly maps from yearly data

2012-02-17 Thread uday
Thank you Michael -- View this message in context: http://r.789695.n4.nabble.com/Plotting-monthly-maps-from-yearly-data-tp4391704p4396787.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list

[R] Plotting issue

2012-02-17 Thread uday
48 different files for different months. I got stuck here, I am quit new in R. it would be very nice it somebody can tell me how to fix this problem. Uday -- View this message in context: http://r.789695.n4.nabble.com/Plotting-issue-tp4396832p4396832.html Sent from the R help mailing

Re: [R] Plotting function image

2012-02-15 Thread uday
Hi , Thanks for reply My latitude and longitude contains 9-10 observations per file when I run coords - expand.grid(lat=1:5,long=1:5) then my computer *** caught segfault *** address 0x6951c20, cause 'memory not mapped' Traceback: 1: .C(spline_eval, z$method, nu = as.integer(n), x

[R] spplot settings

2012-02-15 Thread uday
I want to use spplot function for plotting data on wold map spplot.points(obj, zcol = names(obj), ..., names.attr, scales = list(draw = FALSE), xlab = NULL, ylab = NULL, aspect = mapasp(obj,xlim,ylim), panel = panel.pointsplot, sp.layout = NULL, identify = FALSE, formula,

[R] Plotting monthly maps from yearly data

2012-02-15 Thread uday
I have some data set which is available from 2005-2010 . I would like plot monthly maps out of it. So how I should write loop that can plot this yearly data to for every month and write title for individual months too. -- View this message in context:

[R] save output of loop

2012-02-14 Thread uday
I have some data files e.g 100 . and after for loop I would like to save all data in one single data frame file_s - list.files(path = ., pattern = v2.0.2.txt, all.files = FALSE, full.names = FALSE, recursive = FALSE, ignore.case = FALSE) for (i in 1:100){

[R] Plotting function image

2012-02-14 Thread uday
I have some data set which has latitude, longitude and Z values. I would like to plot them on global map. I am thinking to use image image(x, y, z, zlim, xlim, ylim, col = heat.colors(12), add = FALSE, xaxs = i, yaxs = i, xlab, ylab, breaks, oldstyle = FALSE, useRaster = FALSE, ...)

Re: [R] save output of loop

2012-02-14 Thread uday
Hi it works fine thanks -- View this message in context: http://r.789695.n4.nabble.com/save-output-of-loop-tp4386599p4387806.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list

Re: [R] save output of loop

2012-02-14 Thread uday
The dimensions of variables are unknown , they changes to every file. -- View this message in context: http://r.789695.n4.nabble.com/save-output-of-loop-tp4386599p4387804.html Sent from the R help mailing list archive at Nabble.com. __

[R] logical operator for different dimensions

2012-02-13 Thread uday
I have some dataset sci.pre - 0.300.380.500.650.801.031.331.72 2.22 2.873.815.066.759.00 11.97 14.15 16.34 19.04 22.27 25.49 29.72 34.67 40.47 47.29 55.29 64.67 75.6 88.50 103.50 121.10 141.70 165.80 194.00

Re: [R] logical operator for different dimensions

2012-02-13 Thread uday
Hi Petr, You were correct , thats was the mistake . I am sorry for last reply. now its working. Cheers Uday -- View this message in context: http://r.789695.n4.nabble.com/logical-operator-for-different-dimensions-tp4383316p4384143.html Sent from the R help mailing list archive

[R] time conversion from second to Y M D H M S format

2012-02-02 Thread uday
I have some time data and which is in seconds time -c( 126230400 126252000 126273600 126295200 126316800 126338400) now I wanted to convert this time to Y M D H M S format I have tried following codes but it does not give me the out put in Y M D H M S time_t1 - as.POSIXlt(time,

Re: [R] time conversion from second to Y M D H M S format

2012-02-02 Thread uday
Dear Uwe , Thanks for reply I have tried format function that u suggested (format(time_t1, %Y %m %d %H %M %S) and I got format(time_t1, %Y %m %d %H %M %S) [1] 126230400 126252000 126273600 126295200 126316800 126338400 I think something is not working correct. -- View this message in

[R] how to calculate length of each triangulated face in deldir

2012-01-30 Thread uday
=TRUE) hist(dist[2:9997]) try - deldir(sci_lon,sci_lat) try_p - deldir(sci_lon,sci_lat,plot=TRUE,wl='tr') Now I would like to calculate the length of each triangulated face , could somebody please tell me how to calculate it ? Cheers Uday -- View this message in context

[R] calculating distance between latitude and longitude

2012-01-27 Thread uday
I have some satellite data which contains latitude and longitude information . From this data I would like to calculate distance between first location (scalar latitude and longitude) and all other (vectors latitude and longitude) How I should solve this problem ? -- View this message in

[R] warning massage longer object length is not a multiple of shorter object length

2012-01-24 Thread uday
Dear All, I have data set which includes details of locations e.g latitude, longitude , time. I would like to compare two different data sets ( sampling in space and time). the e.g data sets are as follows t_lat [1] -90.00 -86.17 -82.34 -78.51 -74.68 -70.85 -67.02 -63.19 -59.36 -55.53

Re: [R] warning massage longer object length is not a multiple of shorter object length

2012-01-24 Thread uday
sorry there is typing error in codes the correct ones are nobs-length(s_lat) for (i in 1:length(nobs)){lat_match- which(abs(t_lat - s_lat == min(abs(t_lat - s_lat)))} -- View this message in context:

Re: [R] warning massage longer object length is not a multiple of shorter object length

2012-01-24 Thread uday
Hi Thanks for reply, there was some mistakes in typo. I have already corrected it. this function gives us closest point ( R book reference). So I would like to find all observations on another grid spatially and temporally. the function is just for finding all closest observations. uday

[R] conversion of string

2012-01-23 Thread uday
I new in R programming language. I have some time data time [1] 2005-01-03 05:11:39 UTC 2005-01-03 06:36:02 UTC 2005-01-03 06:36:55 UTC [4] 2005-01-03 06:37:00 UTC 2005-01-03 06:38:04 UTC 2005-01-03 06:38:04 UTC [7] 2005-01-03 06:38:04 UTC 2005-01-03 06:38:04 UTC 2005-01-03 06:38:05 UTC

Re: [R] Serial Date

2012-01-20 Thread uday
Hi, How I should convert Fractional days in Year Month Days Hour Minute and Day format ? -- View this message in context: http://r.789695.n4.nabble.com/Serial-Date-tp3353123p4313144.html Sent from the R help mailing list archive at Nabble.com. __