Re: [R] package installtion

2011-11-17 Thread Scott Raynaud
See my responses in brackets below.   - Original Message - From: Rolf Turner To: Scott Raynaud Cc: "r-help@r-project.org" Sent: Wednesday, November 16, 2011 6:04 PM Subject: Re: [R] package installtion On 17/11/11 05:37, Scott Raynaud wrote: > That might be an option if

Re: [R] package installtion

2011-11-17 Thread R. Michael Weylandt
al Message - > From: Rolf Turner > To: Scott Raynaud > Cc: "r-help@r-project.org" > Sent: Wednesday, November 16, 2011 6:04 PM > Subject: Re: [R] package installtion > > On 17/11/11 05:37, Scott Raynaud wrote: >> That might be an option if it were

[R] package installtion

2011-11-17 Thread Scott Raynaud
aud Cc: "r-help@r-project.org" Sent: Wednesday, November 16, 2011 6:04 PM Subject: Re: [R] package installtion On 17/11/11 05:37, Scott Raynaud wrote: > That might be an option if it weren't my most important predictor.  I'm > thinking my best bet is to use MLWin for

Re: [R] package installtion

2011-11-16 Thread Rolf Turner
On 17/11/11 05:37, Scott Raynaud wrote: That might be an option if it weren't my most important predictor. I'm thinking my best bet is to use MLWin for the estimation since it will properly set fixed effects to 0. All my other sample size simulation programs use SAS PROC IML which I don't

[R] package installtion

2011-11-16 Thread Scott Raynaud
MLWin sets the associated fixed effects to 0.  When R choked, I increased from 20 to 60 as my minimum as suggested in the MLPowSim documentation.  Still no luck.   - Original Message - From: Uwe Ligges To: r-help@r-project.org Cc: Scott Raynaud Sent: Wednesday, November 16, 2011 1:01

Re: [R] package installtion

2011-11-16 Thread Uwe Ligges
Ligges - Original Message - From: Uwe Ligges To: Scott Raynaud Cc: "r-help@r-project.org" Sent: Wednesday, November 16, 2011 9:48 AM Subject: Re: [R] package installtion On 16.11.2011 16:08, Scott Raynaud wrote: All right. I upped my level 2 sampl

[R] package installtion

2011-11-16 Thread Scott Raynaud
I like R since it's free, but I can't work around the problem I'm currently having.   - Original Message - From: Uwe Ligges To: Scott Raynaud Cc: "r-help@r-project.org" Sent: Wednesday, November 16, 2011 9:48 AM Subject: Re: [R] package installtion On 16.11

Re: [R] package installtion

2011-11-16 Thread Uwe Ligges
ere's a way to do this. Why don't you simply delete that variable and hence don't estimate coefficients for it Uwe Ligges - Forwarded Message - From: Scott Raynaud To: "r-help@r-project.org" Cc: Sent: Wednesday, November 16, 2011 7:28 AM Subject: Re: [R]

[R] package installtion

2011-11-16 Thread Scott Raynaud
d Message - From: Scott Raynaud To: "r-help@r-project.org" Cc: Sent: Wednesday, November 16, 2011 7:28 AM Subject: Re: [R] package installtion Well, I could increase the sample size for my second level in hopes that my simulation would run correctly.  However, a better solution

Re: [R] package installtion

2011-11-16 Thread Scott Raynaud
an be done.  I've looked at the documentation but it's still not clear.   - Original Message - From: Uwe Ligges To: Scott Raynaud Cc: "r-help@r-project.org" Sent: Wednesday, November 16, 2011 2:44 AM Subject: Re: [R] package installtion On 15.11.2011 21:34, Scott Rayn

Re: [R] package installtion

2011-11-16 Thread Uwe Ligges
On 15.11.2011 21:34, Scott Raynaud wrote: OK, I think I see the problem. Rather than setting method="nAGQ" I need nAGQ=1. Doing so throws the following error: Congratulations, now you understood what R meant with its message "Argument ‘method’ is deprecated." "Warning messages: 1: glm.

Re: [R] package installtion

2011-11-15 Thread Scott Raynaud
OK, I think I see the problem.  Rather than setting method="nAGQ" I need nAGQ=1.  Doing so throws the following error: "Warning messages: 1: glm.fit: algorithm did not converge 2: In mer_finalize(ans) : gr cannot be computed at initial par (65) Error in diag(vcov(fitmodel)) :   error in evaluat

Re: [R] package installtion

2011-11-15 Thread Scott Raynaud
Never mind-I fixed it. My script is throwing the following error: "Error in glmer(formula = modelformula, data = data, family = binomial(link = logit),  :   Argument ‘method’ is deprecated. Use ‘nAGQ’ to choose AGQ.  PQL is not available." I remember hearing somewhere that PQL is no longer av

[R] package installtion

2011-11-15 Thread Scott Raynaud
I'm getting the following error in a script: "Error: could not find function "lmer."    I'm wondering of my lme4 package is installed incorrectly.  Can someone tell me the installation procedure?  I looked at the support docs but couldn't translate that into anything that would work. __