Re: [R] Force evaluation of variable when calling partialPlot

2010-11-16 Thread Tim Howard
: gdillon gdil...@fs.fed.us To: r-help@r-project.org Subject: Re: [R] Force evaluation of variable when calling partialPlot Message-ID: 1289852948670-3043750.p...@n4.nabble.com Content-Type: text/plain; charset=us-ascii RE: the folloing original question: I'm using the randomForest package and would

Re: [R] Force evaluation of variable when calling partialPlot

2010-11-16 Thread Greg Dillon
...@fs.fed.us, r-help@r-project.org cc Subject Re: [R] Force evaluation of variable when calling partialPlot Greg, Two thoughts: 1. It might be possible that 'vars' is a reserved word of sorts and if you change the name of your vector RF might be happier 2. A way that works for me is to call

Re: [R] Force evaluation of variable when calling partialPlot

2010-11-15 Thread gdillon
RE: the folloing original question: I'm using the randomForest package and would like to generate partial dependence plots, one after another, for a variety of variables: m - randomForest( s, ... ) varnames - c( var1, var2, var3, var4 ) # var1..4 are all in data frame s for( v in

Re: [R] Force evaluation of variable when calling partialPlot

2010-10-04 Thread Liaw, Andy
The plot titles aren't pretty, but the following works for me: R library(randomForest) randomForest 4.5-37 Type rfNews() to see new features/changes/bug fixes. R set.seed(1004) R iris.rf - randomForest(iris[-5], iris[[5]], ntree=1001) R par(mfrow=c(2,2)) R for (i in 1:4) partialPlot(iris.rf,

[R] Force evaluation of variable when calling partialPlot

2010-10-04 Thread Ben Bond-Lamberty
Dear R Users, I'm using the randomForest package and would like to generate partial dependence plots, one after another, for a variety of variables: m - randomForest( s, ... ) varnames - c( var1, var2, var3, var4 ) # var1..4 are all in data frame s for( v in varnames ) { partialPlot( x=m,