Re: [R] Out of memory issue

2009-04-29 Thread Thomas Lumley
On Tue, 28 Apr 2009, Neotropical bat risk assessments wrote: Hi again all, I can read all of the data is in CSV format with a header row and with 1,200,240 rows. I can do all the plots and ggplot2 has no problems. Seems to be a problem with the MASS package??? It seems that the

[R] Out of memory issue

2009-04-28 Thread Neotropical bat risk assessments
Hi again all, I can read all of the data is in CSV format with a header row and with 1,200,240 rows. I can do all the plots and ggplot2 has no problems. Seems to be a problem with the MASS package??? It seems that the contour plots are the problem with the memory error.

Re: [R] Out of memory issue

2009-04-28 Thread Uwe Ligges
Neotropical bat risk assessments wrote: Hi again all, I can read all of the data is in CSV format with a header row and with 1,200,240 rows. I can do all the plots and ggplot2 has no problems. Seems to be a problem with the MASS package??? It seems that the contour plots are

[R] Out of memory issue

2009-04-24 Thread Neotropical bat risk assessments
Hi all, I am trying to run some plots on data, but when loading he CSV data file R is stopping and I am getting an out of memory error. Anyway to tweak this somehow to get it to run? Using WinXP with 4 GB RAM Tnx Bruce __ R-help@r-project.org

Re: [R] Out of memory issue

2009-04-24 Thread Julian Burgos
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Otherwise...the only other possible suggestion is to use a smaller file. Julian Neotropical bat risk assessments wrote: Hi all, I am trying to run

Re: [R] Out of memory issue

2009-04-24 Thread Ken-JP
Is your CSV file really that big? Have you passed the correct parameters to read.table()? For example, specified the correct sep=, parameter? If you've done everything correctly and are still running out of memory, maybe you need to go to 64-bit. R works great under 64-bit Ubuntu (8GB on my

[R] Out of memory issue

2009-04-24 Thread Neotropical bat risk assessments
Hi all, Julian just reminded me I need to include the lines of code so here it is below. I am trying to run some plots on data, but when loading the CSV data file it doss that but in ggplot R is stopping and I am getting an out of memory error. d - read.csv batcalls.rda

Re: [R] Out of memory issue

2009-04-24 Thread David Winsemius
On Apr 24, 2009, at 9:06 PM, Neotropical bat risk assessments wrote: Hi all, Julian just reminded me I need to include the lines of code so here it is below. I am trying to run some plots on data, but when loading the CSV data file it doss that but in ggplot R is stopping and I

Re: [R] Out of memory issue

2009-04-24 Thread David Winsemius
On Apr 24, 2009, at 10:40 PM, David Winsemius wrote: On Apr 24, 2009, at 9:06 PM, Neotropical bat risk assessments wrote: Hi all, Julian just reminded me I need to include the lines of code so here it is below. I am trying to run some plots on data, but when loading the CSV data