Ok.
Pardon me. Its is not a bug. My XML is malformed. The program that generates
writes things like:
>5yr
Which make the XML unsable.
Sorry everyone
Caveman
On Wed, Aug 25, 2010 at 5:31 AM, Duncan Temple Lang wrote:
>
> xmlDoc() is not the function to use to parse a file.
>
> Use
>
> doc
xmlDoc() is not the function to use to parse a file.
Use
doc = xmlParse("Malaria_Grave.xml")
xmlDoc() is for programmatically creating a new XML within R.
It could be more robust to being called with a string, but
the key thing here is that it is not the appropriate function for what
you wa
My system is an Ubuntu 9.10 32bit:
#uname -a
Linux cavemanpc 2.6.31-22-generic #63-Ubuntu SMP Wed Aug 18 22:54:26 UTC
2010 i686 GNU/Linux
# free -m
total used free sharedbuffers cached
Mem: 3000 1847 1152 0120961
-/
It seems to be a bug on the XML package.
This is what I run (and it is not the only file):
> library("XML")
> doc <- xmlDoc("Malaria_Grave.xml")
*** caught segfault ***
address 0x9, cause 'memory not mapped'
Traceback:
1: .Call("RS_XML_createDocFromNode", node, PACKAGE = "XML")
2: xmlDoc("Mal
On Tue, 2010-08-24 at 23:35 +0200, Orvalho Augusto wrote:
> I have one XML file with 30MB that I need to read the data.
>
> I try this;
> library(XML)
> doc <- xmlDoc("Malaria_Grave.xml")
>
> And R answers like this
> *** caught segfault ***
> address 0x5, cause 'memory not mapped'
This is most
I have one XML file with 30MB that I need to read the data.
I try this;
library(XML)
doc <- xmlDoc("Malaria_Grave.xml")
And R answers like this
*** caught segfault ***
address 0x5, cause 'memory not mapped'
Traceback:
1: .Call("RS_XML_createDocFromNode", node, PACKAGE = "XML")
2: xmlDoc("Mala
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