Re: [R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread Jim Lemon
Hi Adrian, Perhaps what you want is this: ajdat<-structure(c(112L, 0L, 579L, 1L, 131L, 1L, 2234L, 2L, 2892L, 1L, 528L, 0L, 582L, 2L), .Dim = c(2L, 7L), .Dimnames = list(c("GN", "CN"), c("DC5", "DC8", "DC14", "DC18", "DC19", "DC20", "DC23" ))) library(plotrix) twoord.plot(0.8:6.8,ajdat[2,],1.2:7.2,

Re: [R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread Adrian Johnson
gt;> David L Carlson >> Department of Anthropology >> Texas A&M University >> College Station, TX 77840-4352 >> >> >> >> -Original Message- >> From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Adams, Jean >> Sent: Wedne

Re: [R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread Adrian Johnson
David L Carlson > Department of Anthropology > Texas A&M University > College Station, TX 77840-4352 > > > > -Original Message- > From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Adams, Jean > Sent: Wednesday, October 12, 2016 12:44 PM > To: Adrian Johnso

Re: [R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread David L Carlson
p-boun...@r-project.org] On Behalf Of Adams, Jean Sent: Wednesday, October 12, 2016 12:44 PM To: Adrian Johnson Cc: r-help Subject: Re: [R] barplot beside=TRUE - values differ on scales Adrian, Very interesting. What do you think of using colors to indicate the five possible loss/gain levels? For example:

Re: [R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread Adams, Jean
Adrian, Very interesting. What do you think of using colors to indicate the five possible loss/gain levels? For example: a <- structure(c(112L, 0L, 579L, 1L, 131L, 1L, 2234L, 2L, 2892L, 1L, 528L, 0L, 582L, 2L), .Dim = c(2L, 7L), .Dimnames = list(c("GN", "CN"), c("DC5", "DC8", "DC14", "DC18",

Re: [R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread Duncan Murdoch
On 12/10/2016 12:59 PM, Adrian Johnson wrote: Thanks Duncan. I am sorry I cannot scale second row (d[2,]). I was looking for a way to plot d[2,] values next to d[1,] with a right side axis=4 on right side. -2,-1,0,1,2 That doesn't really make graphical sense, but you can use any transformati

Re: [R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread Adrian Johnson
Thanks Duncan. I am sorry I cannot scale second row (d[2,]). I was looking for a way to plot d[2,] values next to d[1,] with a right side axis=4 on right side. -2,-1,0,1,2 thanks Adrian On Wed, Oct 12, 2016 at 12:42 PM, Duncan Murdoch wrote: > On 12/10/2016 12:20 PM, Adrian Johnson wrote: >> >>

Re: [R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread Adrian Johnson
Hi Adams, The story I am trying to show visually relationship between GN and CN for every column. Each column represents a patient. In each patient, a particular chromosome region (CN) is either lost (-2 or -1) or gained (1 or 2). Typically if loss (one copy loss - as humans have pair of chromosome

Re: [R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread Duncan Murdoch
On 12/10/2016 12:20 PM, Adrian Johnson wrote: Dear group, I have been struggling to barplot two different measurements from one subject. These two measures differ in range. I want to plot row 1 axis on left side and row 2 values on right side. For a given column I want to plot GN and CN next to

Re: [R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread Adams, Jean
Adrian, What story are you trying to tell? Or what question are you trying to answer by visualizing these data? How is a bar plot of these numbers going to help? I'm just wondering if perhaps a different visualization might make more sense, for example, a scatter plot of GN vs. CN. m <- struct

Re: [R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread S Ellison
> -Original Message- > From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Adrian > Johnson > Sent: 12 October 2016 17:21 > To: r-help > Subject: [R] barplot beside=TRUE - values differ on scales > > Dear group, > I have been struggling to barplot two

[R] barplot beside=TRUE - values differ on scales

2016-10-12 Thread Adrian Johnson
Dear group, I have been struggling to barplot two different measurements from one subject. These two measures differ in range. I want to plot row 1 axis on left side and row 2 values on right side. For a given column I want to plot GN and CN next to each other. my dput code is below : structure