subject:"\[R\] heatmap.2 color issue"

Re: [R] heatmap.2 color issue

2009-01-21 Thread Matthias Kohl

the heatmapCol function of package MKmisc might help ... try: library(MKmisc) example(heatmapCol) Best Matthias Liu, Hao [CNTUS] wrote: Dear All: I tried to use heatmap.2 to generate hierarchical clustering using the following command: heatmap.2(datamatrix, scale=row, trace=none,

[R] heatmap.2 color issue

2009-01-20 Thread Liu, Hao [CNTUS]

Dear All: I tried to use heatmap.2 to generate hierarchical clustering using the following command: heatmap.2(datamatrix, scale=row, trace=none, col=greenred(256), labRow=genelist[,1], margins=c(10,10), Rowv=TRUE, Colv=TRUE) datamatrix is subset of a RMA normalized data subset by a genelist.