Re: [R] if there is a package can do blast for gene in R?

2009-10-27 Thread James W. MacDonald
It depends on what you mean by 'do blast'. If you are looking to align sequences to a reference genome with possible gaps, then you should look at (to start) the Biostrings package of Bioconductor. There are other alignment tools, depending on what exactly you want to do. If you are simply loo

[R] if there is a package can do blast for gene in R?

2009-10-27 Thread echo_july
hello if there is a package can do blast in R? [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.htm