Re: [R] memory failure in adonis function (permanova)

2010-04-27 Thread prb
Dear Gavin, Thanks for your reply. I am trying to get the permanova for 5 species, the first one has 7670 + 1693 (unbalanced factor) with a total of 9363 rows. In windows the proccess directly cracks, but in linux the process will be working days but no ends. I agree with you, I think that the

Re: [R] memory failure in adonis function (permanova)

2010-04-14 Thread Gavin Simpson
On Tue, 2010-03-16 at 17:12 +0100, Paloma Ruiz wrote: Dear all, I am trying to get a PERMANOVA with quite large data set. I am reading a lot about this question, but I do not get the answer about it. Although I know that the R function is adonis () (vegan package), it does not work:

[R] memory failure in adonis function (permanova)

2010-03-16 Thread Paloma Ruiz
Dear all, I am trying to get a PERMANOVA with quite large data set. I am reading a lot about this question, but I do not get the answer about it. Although I know that the R function is adonis () (vegan package), it does not work: adonis(Pha.env~SPha, data=Pha, permutations=10) The error