Sorry, I misunderstood what I was doing and misspoke. I don't think there's
a bug. I had called COMMAND w/in read.delim.
Thanks for all of your help and sorry for the misinformation.
Sincerely,
Mike
-
Department of Ecology Evolutionary
Wow, that's elegant and simple. It's also faster than my approach.
NB, you don't need to use close(), read.delim() closes the pipe when its done
reading.
Thank you all for your suggestions, they really helped me with this problem
and understand R just a bit better.
Sincerely,
Mike
On Thu, Sep 18, 2008 at 1:39 PM, Michael A. Gilchrist [EMAIL PROTECTED] wrote:
Wow, that's elegant and simple. It's also faster than my approach.
NB, you don't need to use close(), read.delim() closes the pipe when its
done reading.
If read.delim() close the connection in this case, it's a
Hello,
I am currently using R to run an external program and then read the results
the external program sends to the stdout which are tsv data.
When R reads the results in it converts it to to a list of strings which I
then have to maniuplate with a whole slew of commands (which, figuring
on 09/12/2008 11:34 AM Michael A. Gilchrist wrote:
Hello,
I am currently using R to run an external program and then read the
results the external program sends to the stdout which are tsv data.
When R reads the results in it converts it to to a list of strings which
I then have to
The conversion to a data frame and the transpose might be time consuming. In
addition to other comments you have received, try this:
matrix(rawinput, ncol = 6, byrow = TRUE)
and if you don't really need a data frame eliminate the conversion from matrix
to data.frame.
You might time this
Hi,
a few comments below.
On Fri, Sep 12, 2008 at 9:34 AM, Michael A. Gilchrist [EMAIL PROTECTED] wrote:
Hello,
I am currently using R to run an external program and then read the results
the external program sends to the stdout which are tsv data.
When R reads the results in it converts
Why not use
con - pipe(COMMAND)
foo - read.delim(con, colClasses=numeric)
close(con)
? See the 'R Data Input/Output Manual'.
On Fri, 12 Sep 2008, Michael A. Gilchrist wrote:
Hello,
I am currently using R to run an external program and then read the results
the external program sends to
8 matches
Mail list logo
