Re: [R] How to create a chromosome location map by locus ID

Sake wrote: Hi, I'm trying to make a chromosomal map in R by using the locus. I have a list of genes and their locus, and I want to visualise that so you can see if there are multiple genes on a specific place on a chromosome. A example of what I more or less want is below:

Re: [R] How to create a chromosome location map by locus ID

Neil Shephard wrote: Whats wrong with things like the HapMap Genome Browser that allows you to zoom in and out and to produce customised annotations of chromosomal regions at varying resolutions (see http://www.hapmap.org/)? Of course I'm assuming that you are looking at human

Re: [R] How to create a chromosome location map by locus ID

Sake tlep.nav.e...@hccnet.nl writes: Neil Shephard wrote: Whats wrong with things like the HapMap Genome Browser that allows you to zoom in and out and to produce customised annotations of chromosomal regions at varying resolutions (see http://www.hapmap.org/)? Of course I'm assuming

Re: [R] How to create a chromosome location map by locus ID

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Re: [R] How to create a chromosome location map by locus ID

Sorry list, I guess I sent an html reply. Hi Sake: If you do not find an answer within the list, MapChart will probably do what you want (without the fancy chromosomal bands, though). You can find it at http://www.biometris.wur.nl/uk/Software/MapChart/ Hope this helps Sake escribió: Hi,