Hello,
This is an urgent request. I want to convert a list of 3 elements into a
matrix and I am not sure how to do it.
The list looks like this:
List of 3
$ : num [1:15364, 1] 0.133 0.622 0.588 1.024 0.583 ...
..- attr(*, dimnames)=List of 2
.. ..$ : chr [1:15364] 6420681 3610072
I also use R to redraw figures for the journal I edit (below), when
the authors cannot produce usable graphics (about 50% of the author
who try).
Unfortunately, I cannot find a way to search for just the R files.
They are all http://journal.sjdm.org/*/*.R
where * is the number of the article.
Hi!
I have a dataset with three columns -the first two refer to x and y
coordinates, the last one are odds ratios.
I'd like to plot the data with x and y coordinates and the odds ratio shown
as a fourfold plot, which I prefer to do using the stars function.
Unfortunately the stars option in
Hello,
I have a matrix with 6 columns and 12 rows. I want to extract out those IDs
(rownames) from my matrix which have a negative values. For each ID(row) if
the negative value is even under 1 column it needs to be extracted out. I
will be grateful for any correct suggestion.
Thanks
rownames(X)[apply(X, 1, function(r) any(r 0))]
... if I understand you correctly.
From: r-help-boun...@r-project.org [r-help-boun...@r-project.org] On Behalf Of
Manisha Brahmachary [mb3...@c2b2.columbia.edu]
Sent: 07 June 2009 08:54
To:
Hi Quin,
This is a well documented bug of Ubuntu 8.10 (Hardy Heron), preventing
applications using libgomp (EBImage via ImageMagick) to work:
https://bugs.launchpad.net/ubuntu/hardy/+source/gcc-4.2/+bug/235070
The bug was fixed in the package gcc-4.2.4-3ubuntu3.
Please note that your R
On Sun, 2009-06-07 at 00:14 -0400, Manisha Brahmachary wrote:
Hello,
This is an urgent request. I want to convert a list of 3 elements into a
matrix and I am not sure how to do it.
The list looks like this:
List of 3
$ : num [1:15364, 1] 0.133 0.622 0.588 1.024 0.583 ...
Hi,
I use nnet for my classification problem and have a problem concerning the
calculation of the final value for my validation data.(nnet only calculates the
final value for the training data). I made my own final value formula (for the
training data I get the same value as nnet):
#
Try this:
site:journal.sjdm.org filetype:R
On Sat, Jun 6, 2009 at 6:39 PM, Jonathan Baronba...@psych.upenn.edu wrote:
I also use R to redraw figures for the journal I edit (below), when
the authors cannot produce usable graphics (about 50% of the author
who try).
Unfortunately, I cannot
Hello,I am a little bit struggling with the following:
I would like to draw a coplot and in each panel draw the curve and display
the coefficients of the regression model y~a*x^b.
I thought of running nls(y~a*x^b,...) in panel=function(x,y...){} when
calling coplot. How can I do this?
Hi,
What I'm trying to achieve is very fast algorithm for fitting logistic
regression model. I have to estimate regression coeficients using
about 10k observations. Once I have coefficients estimated, new 100
rows of data becomes available Now I need to reestimate
coeficients using 100 newly
On 07-Jun-09 10:56:25, Gabor Grothendieck wrote:
Try this:
site:journal.sjdm.org filetype:R
When I enter that into Google, I got only the following two hits:
#
#!/usr/bin/Rscript --vanilla # input is a pre-made list of files ...
#!/usr/bin/Rscript --vanilla # input is a pre-made list of
The fact that the search did find two files suggests that
it works but the problem may be that google has just not
indexed those other files. Try entering the url for one of
them into google and google still does not find it.
http://journal.sjdm.org/8210/test.R
On Sun, Jun 7, 2009 at 7:37 AM,
Argh.
The reason we can't find my example R files with Google is that they
were not indexed because there were no links to them. I've now
created a page with just these links, and a link to that page at the
very bottom of http://journal.sjdm.org/submit.htm
Google should find it all eventually.
Hi Greg
It works! Thanks. I've noticed a lot of general Heron-unhappiness re.
ImageMagick. 'Appreciate that ImageMagick isn't really your domain, but it
might be helpful to put up a solution page somewhere.
postcript 1 - my apologies. I sent this off to the wrong list... I really
should have
The glm function allows you to specify starting values for beta (start =), eta
(etastart =) or mu (mustart =). In your case the starting value for beta would
seem to be the most appropriate. You might find providing a starting value for
mu or eta also works well, provided you can come up with
Hi,
I've realized that the scrolling behavior in View() is unlike most other
applications. It seems that the minimum scroll size is very large for
large objects( i.e., a vector of 1M integers), and it might be that this
scroll is proportional to the size of the object.
Try this:
a = 1:100
I think the reason Google will not find it is that, in the Journal
website, the R files (and the names of the article directories that
might contain them, such as journal.sjdm.org/8210/ -- see below)
are not directly pointed to by any index.html or any
href ... /href in the website, as far as I
On 7 June 2009 at 06:40, Neil Tiffin wrote:
| I am adding your note to google code issues
(http://code.google.com/p/rpostgresql/issues/list
| ), issue Number 1. Normally I monitor R-SIG-DB
(https://stat.ethz.ch/mailman/listinfo/r-sig-db
| ).
That list seems most appropriate.
| Hope to
On 07/06/2009 9:50 AM, Jose Quesada wrote:
Hi,
I've realized that the scrolling behavior in View() is unlike most other
applications. It seems that the minimum scroll size is very large for
large objects( i.e., a vector of 1M integers), and it might be that this
scroll is proportional to the
On 07-Jun-09 14:01:14, Ted Harding wrote:
I think the reason Google will not find it is that, in the Journal
website, the R files (and the names of the article directories that
might contain them, such as journal.sjdm.org/8210/ -- see below)
are not directly pointed to by any index.html or any
Hallo,
I was trying some code, but couldn't make one step of the code properly.
Can anybody please help me?
I have one matrix like this
values
[,1] [,2] [,3] [,4] [,5]
[1,] 0.778 0.3611 0. 0.139 0.000
[2,] 1.000 0. 0.53846154
Hallo,
I was trying some code, but couldn't make one step of the code properly.
Can anybody please help me?
I have one matrix like this
values
[,1] [,2] [,3] [,4] [,5]
[1,] 0.778 0.3611 0. 0.139 0.000
[2,] 1.000 0. 0.53846154
suparna mitra wrote:
Hallo,
I was trying some code, but couldn't make one step of the code properly.
Can anybody please help me?
I have one matrix like this
values
[,1] [,2] [,3] [,4] [,5]
[1,] 0.778 0.3611 0. 0.139 0.000
[2,]
Try this:
t(apply(m, 1, function(x) colMeans(outer(x, x, =
On Sun, Jun 7, 2009 at 10:09 AM, suparna
mitrami...@informatik.uni-tuebingen.de wrote:
Hallo,
I was trying some code, but couldn't make one step of the code properly.
Can anybody please help me?
I have one matrix like this
Apologies if this is an obvious question but I am teaching myself R and the
occasional push in the right direction is much appreciated?
I have a data.frame containing data that looks like this
CustID itemID
1a
1b
2c
3a
3c
I want to assemble the vector of
Hi,
some ideas:
?split
?by
library(plyr)
?ddply
Cheers,
Dylan
On Sun, Jun 7, 2009 at 10:26 AM, jonathanbriggsjonathanbri...@mac.com wrote:
Apologies if this is an obvious question but I am teaching myself R and the
occasional push in the right direction is much appreciated?
I have a
Dear jonathanbriggs,
Try
x - read.table(textConnection(CustID itemID
1a
1b
2c
3a
3c),header=TRUE)
closeAllConnections()
with(x, tapply(CustID, itemID, paste, collapse=,) )
# abc
# 1,3 1 2,3
with(x, tapply(itemID, CustID, paste, collapse=,) )
#
Dear all,
I recently saw a graph on television that displayed selected
words/phrases in a speech scaled in size according to their frequency.
So words/phrases that were often used appeared large and words that were
rarely used appeared small. The closest thing I can find on the web to
On Jun 7, 2009, at 1:41 PM, Brown, Tony Nicholas wrote:
Dear all,
I recently saw a graph on television that displayed selected
words/phrases in a speech scaled in size according to their frequency.
So words/phrases that were often used appeared large and words that
were
rarely used
The only thing that I found for R is by Gregor Gorjanc, but the
information seems to be dated:
http://www.bfro.uni-lj.si/MR/ggorjan/software/R/index.html#tagCloud
Hi,
Yes, I have tried to create a tag cloud plot in R, but I abandoned the project
due to other things. The main obstacle was
Thank you so much Mark and Gregor. The basic information, suggestions,
and R code that you provided is most helpful.
Tony
-Original Message-
From: Gorjanc Gregor [mailto:gregor.gorj...@bfro.uni-lj.si]
Sent: Sunday, June 07, 2009 2:17 PM
To: Marc Schwartz; Brown, Tony Nicholas
Cc: rhelp
Dear All,
I want to ask how to make latex symbol \beta_1 into the title of the page.
The usual bquote does not seem to work.
Any ideas? Thanks a lot.
Regards,
Dajiang
[[alternative HTML version deleted]]
__
R-help@r-project.org mailing list
I have data that looks like this
time_stamp (seconds) user_id
The data is (partial) ordered by time - in that sometimes transactions occur at
the same timestamp. The output I want is collated by transaction time on a per
user basis, normalized by the maximum number of transactions per user,
Below are various attempts using using ggplot2
(http://had.co.nz/ggplot2/). First I try random positioning, then
random positioning with alpha, then a quasi-random position scheme in
polar coordinates:
#this demo has random number generation
# so best to set a seed to make it
# reproducible.
All San Francisco Bay Area useRs:
This Wednesday evening Nicholas is presenting a survey of statistical
visualization best practices corresponding methods in R.
For details see http://www.meetup.com/R-Users/calendar/9763376/
Note this is our last meeting before the summer break.
Hope to see
On 07/06/2009 9:50 AM, Jose Quesada wrote:
Hi,
I've realized that the scrolling behavior in View() is unlike most other
applications. It seems that the minimum scroll size is very large for
large objects( i.e., a vector of 1M integers), and it might be that this
scroll is proportional to the
Another useful way to create a formatted Excel file is to write out an
HTML file, but put an XLS extension on it. When Excel reads it, it
will convert it. Users will treat it like an Excel file. This trick
allows you to add formatted titles, table footnotes, links to other
files (pdf graphs for
Hi all (and Andy!),
When running a randomForest run in R, I get the last part of an output
(with do.trace=T) that looks like this:
1993 | 0.04606 130.43 |
1994 | 0.04605 130.40 |
1995 | 0.04605 130.43 |
1996 | 0.04605 130.43 |
1997 | 0.04606 130.44 |
1998 | 0.04607 130.47 |
Hi Dajiang,
try
plot(1, main=expression(beta[1]))
and, more generally, see
?plotmath
or
demo(plotmath)
Kingsford Jones
On Sun, Jun 7, 2009 at 4:43 PM, Dajiang Jeff Liudajiang@gmail.com wrote:
Dear All,
I want to ask how to make latex symbol \beta_1 into the title of the page.
The
Hi!
I have fitted two glms assuming a poisson distribution which are:
fit1 - glm(Aids ~ Year, data=aids, family=poisson())
fit2 - glm(Aids ~ Year+I(Year^2), data=aids, family=poisson())
I am trying to work out how to represent the fitted regression curves of fit1
and fit2 on the one graph.
One approach to this is generating a representative sequence of your
x-variable(s) with seq() or expand.grid(). Next use the predict()
function to make predictions from your glm object along the sequence.
Finally, plot the predictions vs. the new sequence. Putting everything
into a dataframe
Hi Jo,
Next time try prepare a reproducible code.
You have several ways of do that (see Dylan Beaudette) and give a look
below.
x-1:100
y-7+x*(sqrt(x*runif(100)))
plot(y~x)
mod1-glm(y~x)
mod2-glm(y~x+I(x*x))
curve(mod1$coef[1]+mod1$coef[2]*x, col=red, add=T, lwd=3)
Thank you, it worked.
-Original Message-
From: Bernardo Rangel Tura [mailto:t...@centroin.com.br]
Sent: Sunday, June 07, 2009 6:14 AM
To: Manisha Brahmachary
Cc: r-help@r-project.org
Subject: Re: [R] Convert a lis to matrix
On Sun, 2009-06-07 at 00:14 -0400, Manisha Brahmachary wrote:
Thank you Bill, your suggestion works just fine!!!
-Original Message-
From: bill.venab...@csiro.au [mailto:bill.venab...@csiro.au]
Sent: Sunday, June 07, 2009 3:23 AM
To: Manisha Brahmachary; r-help@r-project.org
Subject: RE: extract rows having negative values
rownames(X)[apply(X, 1,
OK, this is really weird!
here's an example code:
t1-c(1,2,3,4)
t2-c(4,2,4,2)
plot(t1~t2, xlab=exp1, ylab=exp2)
dev.copy2eps(file=test.eps)
that all seems fine...
until you look at the eps file created, where for some weird reason, if you
scroll down to the end, the code reads:
/Font1
HI Guys,
I know that this forum is not for homework but I am trying to interpret R
output code.
I was just wondering if someone might be able to help.
I have been given the following.
For (X1,X2) distributed bivariate normal with parameters
mu1 = 5.8
mu2 = 5.3
sd1 = sd2 = 0.2
and p = 0.6
Since you have provided no executable data and not even a clear enough
description of the data to offer advice regarding approaches or
pitfalls, I will use the example in glm's help page:
counts - c(18,17,15,20,10,20,25,13,12)
outcome - gl(3,1,9)
treatment - gl(3,3)
glm.D93r - glm(counts ~
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