Re: [R] data

2014-02-20 Thread peter dalgaard
On 20 Feb 2014, at 06:07 , IZHAK shabsogh ishaqb...@yahoo.com wrote: please, how can i generate ten different estimated parameter with multiple y, response from the following response. You did. You're just only printing the last one... (sapply(list, coef) to extract the coefficients in

[R] geneation

2014-02-20 Thread IZHAK shabsogh
how do i use set.seed? for example i want to generate fix x with different value of y each time i.e genarate x-rnorm(10) generate y-rnorm(10) i want have x fix but y changes at each iteration. this what i try but is not working { set.seed(100)   x-10*runif(10) } x set.seed(y-rnorm(10)) y

Re: [R] Filling missing data in a Panel

2014-02-20 Thread Francesca Pancotto
Thanks a lot, it works perfectly! f. -- Francesca Pancotto Università degli Studi di Modena e Reggio Emilia Palazzo Dossetti - Viale Allegri, 9 - 42121 Reggio Emilia Office: +39 0522 523264 Web: https://sites.google.com/site/francescapancotto/

[R] writing netCDF with irregular grid

2014-02-20 Thread michaxr27
Hello there, I've got a netCDF file which I want to read, modify, and save, which works well with 'ncdf4'-package. The problem is, that the grid representing the data (temperature values) is irregular, and I am not able to output an irregular grid. In the original file I have two variables ('lat'

[R] unit choice in saveHTML function

2014-02-20 Thread Oli
Dear all, I’m trying to use the saveHTML() function with the svg graphics device ( ani.dev= “svg”) in order to obtain animation with vector graphics. For this device the unit is in inch, while the units for ani.height and ani.width options seems to be in px. As a result, something like

Re: [R] geneation

2014-02-20 Thread Rui Barradas
Hello, I'm not sure I understand the question. When you use set.seed, it will have effect in all calls to the random number generator following it. So the value for y is also fixed. As for your code, you don't need the second set.seed. And though it is not syntatically incorrect, the way you

Re: [R] geneation

2014-02-20 Thread Ted Harding
[see at end] On 20-Feb-2014 10:47:50 Rui Barradas wrote: Hello, I'm not sure I understand the question. When you use set.seed, it will have effect in all calls to the random number generator following it. So the value for y is also fixed. As for your code, you don't need the second

Re: [R] geneation

2014-02-20 Thread Keith.Jewell
On 20/02/2014 12:00, (Ted Harding) wrote: [see at end] It seems clear that Izhak seeks to detach the random generation of y from the random generation of x after using set.seed(). On my reading of ?RNG once set.seed has been used, as RUI says, it affects all subsequent calls to the

Re: [R] multiplot contour

2014-02-20 Thread David Carlson
Your code produces four line graphs, one above the other. What do you mean by drawing a contour line for the entire panel? A contour map requires three vectors, two for the horizontal position and one for the elevation or height. You have four vectors of y variables with the same x. Since you do

Re: [R] dependent column(s) in data frame

2014-02-20 Thread PIKAL Petr
Hi You probably will get more answers when you post your question to Crossvalidated or Stackoverflow as it is more about statistics than about R. Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of PQuery Sent: Wednesday,

Re: [R] geneation

2014-02-20 Thread Jeff Newmiller
I am baffled why you have gone so far down this road, Ted. Considerable effort has gone into making prediction of value N of the RNG sequence unrelated to value N-1 of the sequence as long as you don't know the internal state of the RNG. This is true for both the R internal RNG and the

[R] listserv subscription

2014-02-20 Thread Simone Gill-Alvarez
To Whom It May Concern: I am subscribed to this listserv, but I would like to switch my settings so that I receive a daily batched email rather than individual messages. Is it possible to do that, or do I need to unsubscribe and then resubscribe? Best, Simone Gill [[alternative HTML

Re: [R] Add rows to dataframe by split values

2014-02-20 Thread jayesh.baviskar
Hello Bart, I solved your problem. Please find the code given below, dat -structure(list(Batch = c(1L, 1L, 2L, 2L, 3L, 3L, 4L, 4L, 4L, 4L, 4L, 4L), Test =

[R] An unbalanced factorial experiment - function for GLM model with quasi-Poisson distribution

2014-02-20 Thread Benjamin Jarcuska
Hi, I'm analyzing data from an unbalanced (non-orthogonal) factorial experiment (counts as being dependent on two nominal variables and one continuous variable) using GLM model with quasi-Poisson distribution. Which function (library) accounting for non-orthogonality in the data (something like

[R] CRAN policies - citing others

2014-02-20 Thread Gildas Mazo
Dear R users, we try to submit a package to CRAN. One of our function pbcOptim.R uses lbfgsb.cpp which is a slight modification of optim.c. In the documentation for pbcOptim.R we said The code for pbcOptim is based on that of \code{\link{optim}}. In particular, pbcOptim calls /src/lbfgsb.cpp

[R] Rule Mining - Cross Analysis

2014-02-20 Thread Michael Fueg
Dear All, my problem case: I want to use the apriori-function to analyze my test data. Take a look (the data is attached). WarenGruppe is a hierarchical higher class for Item. I analyzed with apriori() Customer and Item but I want also to start a cross-rule-mining. That means for example that

[R] Problem installing packages

2014-02-20 Thread Matías Guzmán Naranjo
I'm trying to install various packages like lme4, ndl and RcppEigen but they all fail with similar error messages: install.packages(RcppEigen) Installing package into '/home/matias/R/x86_64-pc-linux-gnu-library/3.0' (as 'lib' is unspecified) probando la URL '

Re: [R] CRAN policies - citing others

2014-02-20 Thread Hadley Wickham
I believe this is what you should do: * In the lbfgsb.cpp from base R, include the GPL blurb and R copyright holders. Also add your own names. (see e.g. https://github.com/hadley/pryr/blob/master/src/typename.cpp) * In the DESCRIPTION, add the R core team as a contributor,

Re: [R] Add rows to dataframe by split values

2014-02-20 Thread arun
Hi, Try: library(stringr) res - transform(dat[rep(1:nrow(dat),str_count(dat$Result,-)+1),],Result=unlist(strsplit(as.character(dat$Result), - )),Batch=ave(Batch,Batch,FUN=function(x) paste0(x,letters[seq_along(x)])))  row.names(res) - 1:nrow(res) # Based on the expected results, it could be

Re: [R] listserv subscription

2014-02-20 Thread Uwe Ligges
On 20.02.2014 14:45, Simone Gill-Alvarez wrote: To Whom It May Concern: I am subscribed to this listserv, but I would like to switch my settings so that I receive a daily batched email rather than individual messages. Is it possible to do that, or do I need to unsubscribe and then

[R] bi-monthly time series

2014-02-20 Thread Michael Friendly
The vector, vec, below represents a time series of the number of some events recorded for 208 two-week intervals from 2005/01/01 up to the end of 2012. I want to represent this together with the date information. I tried ts(), but don't quite understand how to use the start=, end= and

[R] data frame manipulation

2014-02-20 Thread Pedro Mardones
Dear R community; I'm kind of stuck with the following situation and would appreciate any hint. Let's assume I have the following data frame: dat - data.frame(ID = c(rep(01,18), rep(02,16)), USE = c(c(001,004, 005,007,001,004,005,007,012,001,004,005,007,001,004,

Re: [R] data frame manipulation

2014-02-20 Thread arun
Hi, Try: dat$ID2 - with(dat,ave(seq_along(USE),ID,FUN=function(x){x1 - USE[x] =='001'; ifelse(!x1,'',cumsum(x1))})) A.K. On Thursday, February 20, 2014 3:31 PM, Pedro Mardones mardone...@gmail.com wrote: Dear R community; I'm kind of stuck with the following situation and would appreciate

Re: [R] bi-monthly time series

2014-02-20 Thread David Carlson
If the data are two week intervals, the frequency is 52/2 = 26 and that matches the amount of data 8*26=208: vec.ts - ts(vec, start=c(2005, 1), frequency=26) str(vec.ts) Time-Series [1:208] from 2005 to 2013: 1 0 0 0 1 1 1 0 2 0 ... print(vec.ts, calendar=TRUE) p1 p2 p3 p4 p5 p6 p7 p8 p9

Re: [R] data frame manipulation

2014-02-20 Thread Jeff Newmiller
Depending what you really want to achieve, the following may be useful or educational: dat$ID2x - with( dat, ave( rep( 1, nrow( dat ) ), ID, USE, FUN=cumsum ) ) dat$ID2y - dat$ID2x dat$ID2y[ dat$USE != 001 ] - NA On Thu, 20 Feb 2014, arun wrote: Hi, Try: dat$ID2 -

Re: [R] bi-monthly time series

2014-02-20 Thread Duncan Mackay
Hi Michael What about using zoo you can convert to ts if required library(zoo) tv - seq(as.Date('2005/01/01'),as.Date('2013/01/01'),by=14) zt - zoo(vec,tv) head(zt) 2005-01-01 2005-01-15 2005-01-29 2005-02-12 2005-02-26 2005-03-12 1 0 0 0 1

[R] Call for abstracts to present at useR! 2014

2014-02-20 Thread Jeroen Ooms
We are happy to inform you that abstract submission for useR! 2014 is now available online, see http://user2014.stat.ucla.edu/ The R User Conference, useR! 2014 is scheduled for July 1-3, 2014 at the University of California, Los Angeles. Before the official program, half-day tutorials will

[R] Data manipulation in a data.frame

2014-02-20 Thread ioanna ioannou
Hello, Assuming that I have a data frame A-data.frame(A=c(10,100,1000,30,50,60,300), B=c(0,1,1,1,0,0,0), C=c(0,0,0,0,1,1,0), D=c(1,0,0,0,0,0,1)) What I would like is to introduce a new column Variable such that:

Re: [R] Data manipulation in a data.frame

2014-02-20 Thread arun
Hi, May be this helps: A$Variable - rep(colnames(A[,-1]),nrow(A))[t(!!A[,-1])] A.K. On Thursday, February 20, 2014 5:55 PM, ioanna ioannou ii54...@msn.com wrote: Hello, Assuming that I have a data frame A-data.frame(A=c(10,100,1000,30,50,60,300),               B=c(0,1,1,1,0,0,0),       

[R] enet and lars alternatives to estimate linear models with lasso regularization.

2014-02-20 Thread Luca Cerone
Dear all, I would like to fit some data (few samples and a much larger number of features), using linear regression with lasso regularization. So far I have used the packages enet and lars, that perform very well and of which I really appreciated the easy interface. Unfortunately, while on the

Re: [R] Data manipulation in a data.frame

2014-02-20 Thread arun
Also, rownames(which(t(!!A[,-1]),arr.ind=TRUE)) A.K. On Thursday, February 20, 2014 6:48 PM, arun smartpink...@yahoo.com wrote: Hi, May be this helps: A$Variable - rep(colnames(A[,-1]),nrow(A))[t(!!A[,-1])] A.K. On Thursday, February 20, 2014 5:55 PM, ioanna ioannou ii54...@msn.com wrote:

Re: [R] Data manipulation in a data.frame

2014-02-20 Thread Bert Gunter
... and yet another approach (written for generalization) names(A)[-1][as.matrix(A[,-1])%*%(seq_len(ncol(A)-1))] [1] D B B B C C D Cheers, Bert Bert Gunter Genentech Nonclinical Biostatistics (650) 467-7374 Data is not information. Information is not knowledge. And knowledge is certainly

[R] Detecting Vehicle locations using R

2014-02-20 Thread umair durrani
I have a data frame of vehicle trajectories. Here's a snapshot: dput(head(df))structure(list(vehicle = c(2L, 2L, 2L, 2L, 2L, 2L), frame = 43:48, globalx = c(6451214.156, 6451216.824, 6451219.616, 6451222.548, 6451225.462, 6451228.376), class = c(2L, 2L, 2L, 2L, 2L, 2L), velocity =

Re: [R] Detecting Vehicle locations using R

2014-02-20 Thread Jeff Newmiller
Please read the Posting Guide, which offers several applicable tips, such as: Don't post in HTML format... it tends to corrupt your code samples. Please provide a hand-generated example result that should be what the solution should transform your sample data into. Please show the code that did

Re: [R] Mapping two data files

2014-02-20 Thread farnoosh sheikhi
Thank you so much Arun:)   On Wednesday, February 19, 2014 6:06 PM, arun smartpink...@yahoo.com wrote: Hi Farnoosh, Try: library(plyr) res - join(`DATA-A`,`DATA-B`,by=Var1,type=right)[,c(3,1:2,4)]  head(res) #  ID   Var1   Var2 var3 #1  1 AETNA CARDINAL CARE TIER 2   NA 

Re: [R] bi-monthly time series

2014-02-20 Thread David Winsemius
On Feb 20, 2014, at 12:03 PM, Michael Friendly wrote: The vector, vec, below represents a time series of the number of some events recorded for 208 two-week intervals from 2005/01/01 up to the end of 2012. I want to represent this together with the date information. I tried ts(), but

Re: [R] Problem installing packages

2014-02-20 Thread Prof Brian Ripley
On 20/02/2014 15:54, Matías Guzmán Naranjo wrote: I'm trying to install various packages like lme4, ndl and RcppEigen but they all fail with similar error messages: install.packages(RcppEigen) Installing package into '/home/matias/R/x86_64-pc-linux-gnu-library/3.0' (as 'lib' is unspecified)